Click here to switch to the map view.

The map label for this gene is des [H]

Identifier: 52784389

GI number: 52784389

Start: 575968

End: 576996

Strand: Reverse

Name: des [H]

Synonym: BLi00576

Alternate gene names: 52784389

Gene position: 576996-575968 (Counterclockwise)

Preceding gene: 52784392

Following gene: 52784388

Centisome position: 13.66

GC content: 38.39

Gene sequence:

>1029_bases
ATGAATGACCAAAATCTAAAGACTTTGAGAAAACTAGTTACACCTTATGAAAAGTCCGATTTACAAAAAAGCATTTACCA
AATCATTAACACATTGATACCATTTTTCCTGTTATGGTGTTTAGCATATAAGAGCTTGTCGATTTCTTATTTCCTTACAT
TAGCGATTTCTATCGTTGCGGCAGGTTTTTTAGTGAGAACCTTCATCATCTTTCATGATTGCTGCCACTATTCCTTTTTT
AAGAACAAAAAGGCGAATCGAATCCTTGGAACAATCACAGGAATTCTAACTTTGCATCCTTTTGATCATTGGGGACGCGA
CCATTCTATCCACCATGCGACAAGCAGCAACCTGGACAAACGAGGTACAGGCGATATTTGGTTGCTGACCGTTGAAGAAT
ATAAGGAAGCCTCAACTAAGACAAAAATAATGTACCGTTTATACAGAAATCCGTTTGTTATGTTTATGATTGGGCCGATT
TACGTCTTCGGGATTACCAATCGTTTTAATCGTAAAGGGGCAAAACGCAAAGAACGGATGAATACGTATGTAACGAACTT
GGGAATCGCCGCTTTGACAGCACTTTTATGCTGGGCTATTGGCTGGCAAAACTTCCTGCTGGTTCAGGCGCCAATTTTTA
TGATATCGGGATCTCTCGGAATTTGGATGTTTTATATTCAGCATACGTTTGAGGATTCTTATTTTGAAGAAGATGAGCAT
TGGGAATATGTAAAAGCAGCAGTTGAAGGAAGCTCTTTTTATAAGCTTCCAAAAGTCATGCAATGGCTAACAGGCAATAT
CGGTTTCCATCATGTTCATCATTTAAGCCCGAGAGTCCCAAACTATAAGCTTGAAGAAGTGCATAACAACATTGAACCAT
TGCAAAACGTTCCAACCATTACACTGGCAACAAGTCTTAAGTCGTTAAAGTTCCGACTATGGGATGAAGAAAGCAAAAAA
TTTGTTGGTTTTAGCCACTTAAAAAAAGCTTCTAAAAGCCAAGTATCAGCGCAACTAAGAACGGATTAA

Upstream 100 bases:

>100_bases
AGTTTCCAATAAAGAGGGCTAAGAACGATACTTATATGATGTATGACGCTTGGACTAACGTAAACTTAGAAACTCATCAG
GGAAGGGGAAACTTTTAAAA

Downstream 100 bases:

>100_bases
ATAAACTTCCCATAATCGATGATAATAGGCAGTGTATCTTGAGAATAAAAGTGCAGACTCGCACAACGGTTTTGTGCAGA
GGTCAGCACTTTTTTAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Delta(5) acyl-lipid desaturase; Delta(5) desaturase [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNDQNLKTLRKLVTPYEKSDLQKSIYQIINTLIPFFLLWCLAYKSLSISYFLTLAISIVAAGFLVRTFIIFHDCCHYSFF
KNKKANRILGTITGILTLHPFDHWGRDHSIHHATSSNLDKRGTGDIWLLTVEEYKEASTKTKIMYRLYRNPFVMFMIGPI
YVFGITNRFNRKGAKRKERMNTYVTNLGIAALTALLCWAIGWQNFLLVQAPIFMISGSLGIWMFYIQHTFEDSYFEEDEH
WEYVKAAVEGSSFYKLPKVMQWLTGNIGFHHVHHLSPRVPNYKLEEVHNNIEPLQNVPTITLATSLKSLKFRLWDEESKK
FVGFSHLKKASKSQVSAQLRTD

Sequences:

>Translated_342_residues
MNDQNLKTLRKLVTPYEKSDLQKSIYQIINTLIPFFLLWCLAYKSLSISYFLTLAISIVAAGFLVRTFIIFHDCCHYSFF
KNKKANRILGTITGILTLHPFDHWGRDHSIHHATSSNLDKRGTGDIWLLTVEEYKEASTKTKIMYRLYRNPFVMFMIGPI
YVFGITNRFNRKGAKRKERMNTYVTNLGIAALTALLCWAIGWQNFLLVQAPIFMISGSLGIWMFYIQHTFEDSYFEEDEH
WEYVKAAVEGSSFYKLPKVMQWLTGNIGFHHVHHLSPRVPNYKLEEVHNNIEPLQNVPTITLATSLKSLKFRLWDEESKK
FVGFSHLKKASKSQVSAQLRTD
>Mature_342_residues
MNDQNLKTLRKLVTPYEKSDLQKSIYQIINTLIPFFLLWCLAYKSLSISYFLTLAISIVAAGFLVRTFIIFHDCCHYSFF
KNKKANRILGTITGILTLHPFDHWGRDHSIHHATSSNLDKRGTGDIWLLTVEEYKEASTKTKIMYRLYRNPFVMFMIGPI
YVFGITNRFNRKGAKRKERMNTYVTNLGIAALTALLCWAIGWQNFLLVQAPIFMISGSLGIWMFYIQHTFEDSYFEEDEH
WEYVKAAVEGSSFYKLPKVMQWLTGNIGFHHVHHLSPRVPNYKLEEVHNNIEPLQNVPTITLATSLKSLKFRLWDEESKK
FVGFSHLKKASKSQVSAQLRTD

Specific function: Catalyzes the introduction of a cis-double bond at the delta(5) position of existing saturated fatty acids attached to membrane phospholipids. It is not strictly specific for palmitic acid (C16) but can also accept C14 as well as C18 species to yield unsa

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: 1.14.99.-

Molecular weight: Translated: 39779; Mature: 39779

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQNLKTLRKLVTPYEKSDLQKSIYQIINTLIPFFLLWCLAYKSLSISYFLTLAISIVA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFLVRTFIIFHDCCHYSFFKNKKANRILGTITGILTLHPFDHWGRDHSIHHATSSNLDK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCHHCCCCCCCCCCCCCCCCC
RGTGDIWLLTVEEYKEASTKTKIMYRLYRNPFVMFMIGPIYVFGITNRFNRKGAKRKERM
CCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCEEEEEEHHHHEEECCHHHHHCCHHHHHHH
NTYVTNLGIAALTALLCWAIGWQNFLLVQAPIFMISGSLGIWMFYIQHTFEDSYFEEDEH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCHH
WEYVKAAVEGSSFYKLPKVMQWLTGNIGFHHVHHLSPRVPNYKLEEVHNNIEPLQNVPTI
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHCCHHHHHCCCCC
TLATSLKSLKFRLWDEESKKFVGFSHLKKASKSQVSAQLRTD
HHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDQNLKTLRKLVTPYEKSDLQKSIYQIINTLIPFFLLWCLAYKSLSISYFLTLAISIVA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFLVRTFIIFHDCCHYSFFKNKKANRILGTITGILTLHPFDHWGRDHSIHHATSSNLDK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCHHCCCCCCCCCCCCCCCCC
RGTGDIWLLTVEEYKEASTKTKIMYRLYRNPFVMFMIGPIYVFGITNRFNRKGAKRKERM
CCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCEEEEEEHHHHEEECCHHHHHCCHHHHHHH
NTYVTNLGIAALTALLCWAIGWQNFLLVQAPIFMISGSLGIWMFYIQHTFEDSYFEEDEH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCHH
WEYVKAAVEGSSFYKLPKVMQWLTGNIGFHHVHHLSPRVPNYKLEEVHNNIEPLQNVPTI
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHCCHHHHHCCCCC
TLATSLKSLKFRLWDEESKKFVGFSHLKKASKSQVSAQLRTD
HHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9555904; 9384377 [H]