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The map label for this gene is 52784388

Identifier: 52784388

GI number: 52784388

Start: 575091

End: 575351

Strand: Reverse

Name: 52784388

Synonym: BLi00575

Alternate gene names: NA

Gene position: 575351-575091 (Counterclockwise)

Preceding gene: 52784389

Following gene: 52784387

Centisome position: 13.63

GC content: 34.48

Gene sequence:

>261_bases
TTGATTCAAGAGGTGATGGTCGTGAAGAAAGACTTTGGTGATTCGATATCAAATAAGGTTTATGAATATCGTGTACTTGC
CAGAATGTCTCAGCAAGAATTAGCGGAGAAAGTCGGGGTTTCCAAACAAACCATTTTCGTAATGGAAAAAGGAAATTATG
TTCCGACTCTGCTGTTGGCTTTTCGAATTGCTGAATTTTTTAATGTTGATGTAAACGAAATTTTTACTTATGTGAAAGGA
AATGATCAAAATGATAAGTAA

Upstream 100 bases:

>100_bases
AATTTGGCTCTTGTTATATCAAAGTAACCTAAACAAAAATAAAATTATTTTATCCTTTTGTATAAGTTTACTTTACTTTT
GTAAAAAGTAAGTTTATAAT

Downstream 100 bases:

>100_bases
GTTTTTCTCAGGTATCCATAACACAATTTTTTCCCCTTTAAGGTCCTGGGCTGAACAATCTCCGGGAAATTGGAATATTC
TCATCGTTGTTGGTTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MIQEVMVVKKDFGDSISNKVYEYRVLARMSQQELAEKVGVSKQTIFVMEKGNYVPTLLLAFRIAEFFNVDVNEIFTYVKG
NDQNDK

Sequences:

>Translated_86_residues
MIQEVMVVKKDFGDSISNKVYEYRVLARMSQQELAEKVGVSKQTIFVMEKGNYVPTLLLAFRIAEFFNVDVNEIFTYVKG
NDQNDK
>Mature_86_residues
MIQEVMVVKKDFGDSISNKVYEYRVLARMSQQELAEKVGVSKQTIFVMEKGNYVPTLLLAFRIAEFFNVDVNEIFTYVKG
NDQNDK

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 9960; Mature: 9960

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQEVMVVKKDFGDSISNKVYEYRVLARMSQQELAEKVGVSKQTIFVMEKGNYVPTLLLA
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH
FRIAEFFNVDVNEIFTYVKGNDQNDK
HHHHHHHCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIQEVMVVKKDFGDSISNKVYEYRVLARMSQQELAEKVGVSKQTIFVMEKGNYVPTLLLA
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH
FRIAEFFNVDVNEIFTYVKGNDQNDK
HHHHHHHCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]