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The map label for this gene is ycnJ [H]

Identifier: 52784300

GI number: 52784300

Start: 482701

End: 484347

Strand: Reverse

Name: ycnJ [H]

Synonym: BLi00480

Alternate gene names: 52784300

Gene position: 484347-482701 (Counterclockwise)

Preceding gene: 52784301

Following gene: 52784299

Centisome position: 11.47

GC content: 49.06

Gene sequence:

>1647_bases
ATGAATGTGATGAAAAGAGCAACACTCTGGGCAGTTCTGGCTGTTCTTTGTACCATTCTGCTGCCAAAAGCCGCTTTTGC
TCACGCTTATATCGTACAATCAACTCCTGCTGAAAATCAGGAGCTGAAAAAAGCGCCTGAAGAAATTAAGATCGAATTCA
ATGAAGCGATTCAGAACGGGTTTCATTCGATAACGGTCAGAAATTCGTCGGGTGAACGGGTAGATTCCGGCAAAACGGAA
ATCGACCCCCAAAACGCAAAGATCATGACCGTCAAGCTGAAACCGAAGTTAAAGGATGATATCTACTCGGCCGAATGGAG
AGCCGTATCCGCAGACGGTCATCCTGTATCAGGCACGATCCCTTTTAGTATCGGAAACATTCAAGGCGGGCTGCCGAAAG
ATCAGCAAAATCAAGCATCAGGCCTGCCGGCAGCCGATATCGTCATTGAACGCGTCCTTTTGTATACCGGTTTCTCCCTG
TTCATGGGAGCCGCTCTTTTTCAGCTCGTCTGGCACCGACCTGAAAACGGCTGGCCGGGTGACAAAAAGCGCCGTCTGAA
GCGGATCACGAATGTGGCGCTCTTATTGACAGGGGCTGCCATCATCATTCAGCTGCCACTGCAAACAAAAACAAACGCAG
GCGTTTCCTGGATCGGGGCTTTTCAGCCTTCGCTTTTAAAAGAAACGCTTCTGAATACGACGGGCGGAACGCTGTGGCTG
ATCAACATCGCCATCATCGCCTTGCTTGTTTTCTCTTCGAATAGAAAAGGCCTGAAGAGCGCGATCTTGAGCCTGTTCCT
TTTTGCCGGACTATTGTTCGTCAAATCGCTCGACGGCCATGCCGCTTCGACGAGCGCAGGCTATATGACAATCGCGATGA
ACTTCATCCATCTGAATGCCGCTTCCATTTGGACTGGCGGACTCGCGATGTTTGTGCTGTTTTTCGGAAAAGACTGGCTG
AAGCCTGACAAAAGTTTGATATGGGAAACCATTCGGCGCTTCTCGCCATGGGCGCTCGCTTCAGCAGGGCTACTCATATT
CTCGGGCCTTTTCAACAGCTTTTTCATTGTTCATACACTGGATAACCTGTTCGGGACGGCTTACGGAAAAGCGCTCCTTG
TGAAATCGGCGCTCGTCCTTCTCATGATCGGACTCGGGGCATTTCACTATTTTCGTTTTAGAAAAGCGCCGAAACAGCAG
GGCGGCCGTTCGATGAAAGCTGAATGGGCGGTCGGGCTTCTCATTCTGCTGACCACGGCGGTTTTCACCAATATTCCAAG
TCCGCCCGCGCCGCTGCCGCAGCCTTTCAGTGAGACGAAGCAGCTGACGGAAGGAAATACGCTGTCACTCCGAATCAGCC
CAAACATGCCGGGCTCAAATACGTTTGAAGTCACCGTCAGAAACAGAAAAGGAGACGTCGTCAAAGATATCCAAAAAATT
GAATTAACCGTTGAGAAAACCGGGCTTTTCGGGGATGACAAGGAAAGCACGTTCAGCCTCAGCAAAAATAAAGACGGTGT
TTTCCAAACGAAAAATTTAAATTTAAGCGAAGACGGCATCTGGAAGATCCGCGTTCACGGATTAACGGCGTCATTTGAGG
AAATCAGAACAGTTTTCAATGCAAAAATTAATAAAAAGGAGTTTTGA

Upstream 100 bases:

>100_bases
GGACAGCTGTTATCGTTTGACGATGCCGCGCTTCTGGTCCAGAAAACGATGAAGAACAGCTGCTGCAGCCTGAAGACATG
AAATTTTGTTAAGAGATTGG

Downstream 100 bases:

>100_bases
TTATGTTGAAAAAGACATTATGGATGGGTGCAATCCTAGCATCATTTTTGCTTTTCTCCGTGCCGGTCAGCGCACATGTC
ACGGTAAAACCGACCGAATC

Product: YcnJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MNVMKRATLWAVLAVLCTILLPKAAFAHAYIVQSTPAENQELKKAPEEIKIEFNEAIQNGFHSITVRNSSGERVDSGKTE
IDPQNAKIMTVKLKPKLKDDIYSAEWRAVSADGHPVSGTIPFSIGNIQGGLPKDQQNQASGLPAADIVIERVLLYTGFSL
FMGAALFQLVWHRPENGWPGDKKRRLKRITNVALLLTGAAIIIQLPLQTKTNAGVSWIGAFQPSLLKETLLNTTGGTLWL
INIAIIALLVFSSNRKGLKSAILSLFLFAGLLFVKSLDGHAASTSAGYMTIAMNFIHLNAASIWTGGLAMFVLFFGKDWL
KPDKSLIWETIRRFSPWALASAGLLIFSGLFNSFFIVHTLDNLFGTAYGKALLVKSALVLLMIGLGAFHYFRFRKAPKQQ
GGRSMKAEWAVGLLILLTTAVFTNIPSPPAPLPQPFSETKQLTEGNTLSLRISPNMPGSNTFEVTVRNRKGDVVKDIQKI
ELTVEKTGLFGDDKESTFSLSKNKDGVFQTKNLNLSEDGIWKIRVHGLTASFEEIRTVFNAKINKKEF

Sequences:

>Translated_548_residues
MNVMKRATLWAVLAVLCTILLPKAAFAHAYIVQSTPAENQELKKAPEEIKIEFNEAIQNGFHSITVRNSSGERVDSGKTE
IDPQNAKIMTVKLKPKLKDDIYSAEWRAVSADGHPVSGTIPFSIGNIQGGLPKDQQNQASGLPAADIVIERVLLYTGFSL
FMGAALFQLVWHRPENGWPGDKKRRLKRITNVALLLTGAAIIIQLPLQTKTNAGVSWIGAFQPSLLKETLLNTTGGTLWL
INIAIIALLVFSSNRKGLKSAILSLFLFAGLLFVKSLDGHAASTSAGYMTIAMNFIHLNAASIWTGGLAMFVLFFGKDWL
KPDKSLIWETIRRFSPWALASAGLLIFSGLFNSFFIVHTLDNLFGTAYGKALLVKSALVLLMIGLGAFHYFRFRKAPKQQ
GGRSMKAEWAVGLLILLTTAVFTNIPSPPAPLPQPFSETKQLTEGNTLSLRISPNMPGSNTFEVTVRNRKGDVVKDIQKI
ELTVEKTGLFGDDKESTFSLSKNKDGVFQTKNLNLSEDGIWKIRVHGLTASFEEIRTVFNAKINKKEF
>Mature_548_residues
MNVMKRATLWAVLAVLCTILLPKAAFAHAYIVQSTPAENQELKKAPEEIKIEFNEAIQNGFHSITVRNSSGERVDSGKTE
IDPQNAKIMTVKLKPKLKDDIYSAEWRAVSADGHPVSGTIPFSIGNIQGGLPKDQQNQASGLPAADIVIERVLLYTGFSL
FMGAALFQLVWHRPENGWPGDKKRRLKRITNVALLLTGAAIIIQLPLQTKTNAGVSWIGAFQPSLLKETLLNTTGGTLWL
INIAIIALLVFSSNRKGLKSAILSLFLFAGLLFVKSLDGHAASTSAGYMTIAMNFIHLNAASIWTGGLAMFVLFFGKDWL
KPDKSLIWETIRRFSPWALASAGLLIFSGLFNSFFIVHTLDNLFGTAYGKALLVKSALVLLMIGLGAFHYFRFRKAPKQQ
GGRSMKAEWAVGLLILLTTAVFTNIPSPPAPLPQPFSETKQLTEGNTLSLRISPNMPGSNTFEVTVRNRKGDVVKDIQKI
ELTVEKTGLFGDDKESTFSLSKNKDGVFQTKNLNLSEDGIWKIRVHGLTASFEEIRTVFNAKINKKEF

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=117, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 60290; Mature: 60290

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVMKRATLWAVLAVLCTILLPKAAFAHAYIVQSTPAENQELKKAPEEIKIEFNEAIQNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCCHHEEEEHHHHHHCC
FHSITVRNSSGERVDSGKTEIDPQNAKIMTVKLKPKLKDDIYSAEWRAVSADGHPVSGTI
CEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCCEEECCCCCCCCCEE
PFSIGNIQGGLPKDQQNQASGLPAADIVIERVLLYTGFSLFMGAALFQLVWHRPENGWPG
CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
DKKRRLKRITNVALLLTGAAIIIQLPLQTKTNAGVSWIGAFQPSLLKETLLNTTGGTLWL
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHH
INIAIIALLVFSSNRKGLKSAILSLFLFAGLLFVKSLDGHAASTSAGYMTIAMNFIHLNA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECH
ASIWTGGLAMFVLFFGKDWLKPDKSLIWETIRRFSPWALASAGLLIFSGLFNSFFIVHTL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHH
DNLFGTAYGKALLVKSALVLLMIGLGAFHYFRFRKAPKQQGGRSMKAEWAVGLLILLTTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHH
VFTNIPSPPAPLPQPFSETKQLTEGNTLSLRISPNMPGSNTFEVTVRNRKGDVVKDIQKI
HHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHH
ELTVEKTGLFGDDKESTFSLSKNKDGVFQTKNLNLSEDGIWKIRVHGLTASFEEIRTVFN
EEEEEECCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHC
AKINKKEF
CCCCCCCC
>Mature Secondary Structure
MNVMKRATLWAVLAVLCTILLPKAAFAHAYIVQSTPAENQELKKAPEEIKIEFNEAIQNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCCHHEEEEHHHHHHCC
FHSITVRNSSGERVDSGKTEIDPQNAKIMTVKLKPKLKDDIYSAEWRAVSADGHPVSGTI
CEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCCEEECCCCCCCCCEE
PFSIGNIQGGLPKDQQNQASGLPAADIVIERVLLYTGFSLFMGAALFQLVWHRPENGWPG
CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
DKKRRLKRITNVALLLTGAAIIIQLPLQTKTNAGVSWIGAFQPSLLKETLLNTTGGTLWL
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHH
INIAIIALLVFSSNRKGLKSAILSLFLFAGLLFVKSLDGHAASTSAGYMTIAMNFIHLNA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECH
ASIWTGGLAMFVLFFGKDWLKPDKSLIWETIRRFSPWALASAGLLIFSGLFNSFFIVHTL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHH
DNLFGTAYGKALLVKSALVLLMIGLGAFHYFRFRKAPKQQGGRSMKAEWAVGLLILLTTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHH
VFTNIPSPPAPLPQPFSETKQLTEGNTLSLRISPNMPGSNTFEVTVRNRKGDVVKDIQKI
HHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHH
ELTVEKTGLFGDDKESTFSLSKNKDGVFQTKNLNLSEDGIWKIRVHGLTASFEEIRTVFN
EEEEEECCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHC
AKINKKEF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]