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The map label for this gene is ycnE [H]

Identifier: 52784291

GI number: 52784291

Start: 473953

End: 474240

Strand: Reverse

Name: ycnE [H]

Synonym: BLi00471

Alternate gene names: 52784291

Gene position: 474240-473953 (Counterclockwise)

Preceding gene: 52784293

Following gene: 52784290

Centisome position: 11.23

GC content: 44.79

Gene sequence:

>288_bases
ATGATCGTATTGCAAGCCTATATGAAAGTAAAACCAGAAAAACGAGACGCCTTTCTCGAAAGCGTACAACCGCTTCTTAA
ACATTCAAGAGCTGAAGCCGGCAATGCCCAGTACCAGCTGTTTGAAGATACCGAACATGCCAATACATTTGTCATGCTTG
AGCAATGGAAGGATCAAGACGCGCTTGACGCACATAATCAGACAGAGCATTTTCAAGCTTTCGTTCAAGCGGCGGGCGAC
CTTTTATCAGAACCCCTGAATGTGGTTAAAACGCACACAACGGATTAA

Upstream 100 bases:

>100_bases
GTTACGATTCAATTGTTCGAAGATTTTCGAACAATCAATTCCCTGTGTATACAACGCACACGAAAAGGAATTCTAAATGA
CATAATGGAGGTTTGATCCA

Downstream 100 bases:

>100_bases
AGAAAGGATGAGTTTCTAATGAATGAAGTATTGAAAACATTGAAAGACCATAGATCAATCCGCAGCTATACAGATGAGCC
CGTGAGCCCTGAACAGCTGG

Product: YcnE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIVLQAYMKVKPEKRDAFLESVQPLLKHSRAEAGNAQYQLFEDTEHANTFVMLEQWKDQDALDAHNQTEHFQAFVQAAGD
LLSEPLNVVKTHTTD

Sequences:

>Translated_95_residues
MIVLQAYMKVKPEKRDAFLESVQPLLKHSRAEAGNAQYQLFEDTEHANTFVMLEQWKDQDALDAHNQTEHFQAFVQAAGD
LLSEPLNVVKTHTTD
>Mature_95_residues
MIVLQAYMKVKPEKRDAFLESVQPLLKHSRAEAGNAQYQLFEDTEHANTFVMLEQWKDQDALDAHNQTEHFQAFVQAAGD
LLSEPLNVVKTHTTD

Specific function: Putative monooxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lsrG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 10869; Mature: 10869

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLQAYMKVKPEKRDAFLESVQPLLKHSRAEAGNAQYQLFEDTEHANTFVMLEQWKDQD
CEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCC
ALDAHNQTEHFQAFVQAAGDLLSEPLNVVKTHTTD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIVLQAYMKVKPEKRDAFLESVQPLLKHSRAEAGNAQYQLFEDTEHANTFVMLEQWKDQD
CEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCC
ALDAHNQTEHFQAFVQAAGDLLSEPLNVVKTHTTD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]