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The map label for this gene is tlpC [H]

Identifier: 52784215

GI number: 52784215

Start: 367579

End: 368757

Strand: Reverse

Name: tlpC [H]

Synonym: BLi00393

Alternate gene names: 52784215

Gene position: 368757-367579 (Counterclockwise)

Preceding gene: 52784216

Following gene: 52784214

Centisome position: 8.73

GC content: 44.02

Gene sequence:

>1179_bases
TTGGGGACGAAAATTAATCTTCTCGTGTTAGCCGTTATTCTGATCTTTTCGTCAGCACTCGGGATTTTCATTATCAAAGA
GCTTTCAAAAGAGTTAGAACAGATGGCGACAGAGAAAGCCAAAAGCGATTTGAAATTGAGCTACCGTTATTTGAATGAAT
CTCTTGAAGGTGATTGGGAAGTCAAAGAAGACAGGCTCTACAAAGGTTCGACCCTTATCAACGGAAATGAAGAACTCGTC
GACCAAATCGGCAATGATACGAAAGACACTGTCACCATCTTTCAATATGACACGCGCGTATCTACAAATGTGACGGTAGA
CGGAAAACGCGCTGTCGGAACGAAAGTGTCTTCGGAGGTAGCAAATGCGGTTTTAAAAGAAGGAAAAAACTTTTATGGAA
AAGCAGATGTAGCGGGAAAAACATATCAAACGGCATATATGCCGATCAAAGACAAGAGCGGTGAAGTTATCGGCATCTTT
TATACAGGGGCCGACCAGGATATGATCACAAGCACTCTTCAATCGTTCCTGAAAATTTTTGCTATCGTTCTGACTGCTTC
AATCATCATCTCCATTTTGCTTGTCCTCATTTTCACCAAAAGGATAGGCGGAAGGCTCAGAATGCTGACTCATGCTTTTG
AACAGGCGGGCAGCGGCAATTTGACAACCGAGATCCAGGATGATTCGACAGATGAACTGGGCGACTTGTCACATCATTTC
AATCAAATGAATGACAGCCTAAACCGGCTGATGCAAAAAATTTCACAGTCGTCGCACAGTGTAGCTGCCGCTTCTGATCA
GCTGACATCTGGAGCTGAAGAAACAAGCCTCGCTTCTGAGAAAATCACCGAAGCCGTCCAGCATATCGCAAGTTCATCGG
AAATGCAGACATCGGGGATAGCAGGCAGCAAACAAGCCGTTGAACAAGTTTCCGCCGATATTCAAAACATATCAGAAAAC
GCTGCGATCCTGAATGAAAAGAGCCAATACGCCCGCAAAAAAGCAAAACAGGGGGCAAAAGATATCTCCGAAACGATGCG
GCAAATTCACACGATGCATCAATCGGTCCATGAAAGCGGAGAAATCATTGAAATGCTTAAAATACAAGATCATATGAAAT
CGGCAGCATTTCAAAAGCGATCACGGAGATTGCCGATCAAACCAACCTGCTCGCTTTGA

Upstream 100 bases:

>100_bases
CCGTTTTCACAAGCGGGGTTTTCTTTTTCATTTTGTCAACACGCCTCCGTTTTAACCGATATTGTATACAGGTGAAACAT
GAAAGCGATTTAAGCTGAAA

Downstream 100 bases:

>100_bases
ACGCTTCAATAGAAGCTGCAAGAGCAGGAGAACACGGAAAAGGATTCGCCGTCGTTGCGGAAGAAGTTCGCCGTCTTGCC
GAACAGTCGCAGCAATCAGC

Product: TlpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MGTKINLLVLAVILIFSSALGIFIIKELSKELEQMATEKAKSDLKLSYRYLNESLEGDWEVKEDRLYKGSTLINGNEELV
DQIGNDTKDTVTIFQYDTRVSTNVTVDGKRAVGTKVSSEVANAVLKEGKNFYGKADVAGKTYQTAYMPIKDKSGEVIGIF
YTGADQDMITSTLQSFLKIFAIVLTASIIISILLVLIFTKRIGGRLRMLTHAFEQAGSGNLTTEIQDDSTDELGDLSHHF
NQMNDSLNRLMQKISQSSHSVAAASDQLTSGAEETSLASEKITEAVQHIASSSEMQTSGIAGSKQAVEQVSADIQNISEN
AAILNEKSQYARKKAKQGAKDISETMRQIHTMHQSVHESGEIIEMLKIQDHMKSAAFQKRSRRLPIKPTCSL

Sequences:

>Translated_392_residues
MGTKINLLVLAVILIFSSALGIFIIKELSKELEQMATEKAKSDLKLSYRYLNESLEGDWEVKEDRLYKGSTLINGNEELV
DQIGNDTKDTVTIFQYDTRVSTNVTVDGKRAVGTKVSSEVANAVLKEGKNFYGKADVAGKTYQTAYMPIKDKSGEVIGIF
YTGADQDMITSTLQSFLKIFAIVLTASIIISILLVLIFTKRIGGRLRMLTHAFEQAGSGNLTTEIQDDSTDELGDLSHHF
NQMNDSLNRLMQKISQSSHSVAAASDQLTSGAEETSLASEKITEAVQHIASSSEMQTSGIAGSKQAVEQVSADIQNISEN
AAILNEKSQYARKKAKQGAKDISETMRQIHTMHQSVHESGEIIEMLKIQDHMKSAAFQKRSRRLPIKPTCSL
>Mature_391_residues
GTKINLLVLAVILIFSSALGIFIIKELSKELEQMATEKAKSDLKLSYRYLNESLEGDWEVKEDRLYKGSTLINGNEELVD
QIGNDTKDTVTIFQYDTRVSTNVTVDGKRAVGTKVSSEVANAVLKEGKNFYGKADVAGKTYQTAYMPIKDKSGEVIGIFY
TGADQDMITSTLQSFLKIFAIVLTASIIISILLVLIFTKRIGGRLRMLTHAFEQAGSGNLTTEIQDDSTDELGDLSHHFN
QMNDSLNRLMQKISQSSHSVAAASDQLTSGAEETSLASEKITEAVQHIASSSEMQTSGIAGSKQAVEQVSADIQNISENA
AILNEKSQYARKKAKQGAKDISETMRQIHTMHQSVHESGEIIEMLKIQDHMKSAAFQKRSRRLPIKPTCSL

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 43125; Mature: 42993

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKINLLVLAVILIFSSALGIFIIKELSKELEQMATEKAKSDLKLSYRYLNESLEGDWE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VKEDRLYKGSTLINGNEELVDQIGNDTKDTVTIFQYDTRVSTNVTVDGKRAVGTKVSSEV
CCCCCEECCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCHHHCHHHHHHH
ANAVLKEGKNFYGKADVAGKTYQTAYMPIKDKSGEVIGIFYTGADQDMITSTLQSFLKIF
HHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
AIVLTASIIISILLVLIFTKRIGGRLRMLTHAFEQAGSGNLTTEIQDDSTDELGDLSHHF
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
NQMNDSLNRLMQKISQSSHSVAAASDQLTSGAEETSLASEKITEAVQHIASSSEMQTSGI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCC
AGSKQAVEQVSADIQNISENAAILNEKSQYARKKAKQGAKDISETMRQIHTMHQSVHESG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCH
EIIEMLKIQDHMKSAAFQKRSRRLPIKPTCSL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GTKINLLVLAVILIFSSALGIFIIKELSKELEQMATEKAKSDLKLSYRYLNESLEGDWE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VKEDRLYKGSTLINGNEELVDQIGNDTKDTVTIFQYDTRVSTNVTVDGKRAVGTKVSSEV
CCCCCEECCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCHHHCHHHHHHH
ANAVLKEGKNFYGKADVAGKTYQTAYMPIKDKSGEVIGIFYTGADQDMITSTLQSFLKIF
HHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
AIVLTASIIISILLVLIFTKRIGGRLRMLTHAFEQAGSGNLTTEIQDDSTDELGDLSHHF
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
NQMNDSLNRLMQKISQSSHSVAAASDQLTSGAEETSLASEKITEAVQHIASSSEMQTSGI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCC
AGSKQAVEQVSADIQNISENAAILNEKSQYARKKAKQGAKDISETMRQIHTMHQSVHESG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCH
EIIEMLKIQDHMKSAAFQKRSRRLPIKPTCSL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7921238; 7704255; 8969502; 9384377 [H]