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The map label for this gene is tlpC [H]

Identifier: 52784214

GI number: 52784214

Start: 367079

End: 367582

Strand: Reverse

Name: tlpC [H]

Synonym: BLi00392

Alternate gene names: 52784214

Gene position: 367582-367079 (Counterclockwise)

Preceding gene: 52784215

Following gene: 52784211

Centisome position: 8.71

GC content: 44.84

Gene sequence:

>504_bases
TTGAACGCTTCAATAGAAGCTGCAAGAGCAGGAGAACACGGAAAAGGATTCGCCGTCGTTGCGGAAGAAGTTCGCCGTCT
TGCCGAACAGTCGCAGCAATCAGCCAATCAGATCTCCCACCTCATTTCAGGGATTCAATCAGAAATCGCAACCACAACCG
ATTCAATCATGACAGTGAAAACGGAAGCGGTCAACGGCGTCAAAATGATCGAAAAGAACAAAAGGACATTTGAATCTATT
GACGGCTTAATGGAAGAGTTCAGCGTAAGAATTTCCGACTTGTCTTCCGACGCCCGGCATATATCGCAAAGCATTCAAAA
CATCACAACATCATTTACAGCAATCTCAAAAGAAGTTCAGGAAACATCTGATTATTCACAACAAGTCGCAGGTCTGACAG
AAGAGCAGTTTGCGGCTATGGAAGAAGTCACCGCCTCTGCAAATGAACTCTCCAAACTGGCTGAAGATTTGCATCAGCTC
ATCGGTGAAGTCAAAATGAAATAG

Upstream 100 bases:

>100_bases
GCGGAGAAATCATTGAAATGCTTAAAATACAAGATCATATGAAATCGGCAGCATTTCAAAAGCGATCACGGAGATTGCCG
ATCAAACCAACCTGCTCGCT

Downstream 100 bases:

>100_bases
CAGGGAAAAAGGGCTGCCGTTAAAACGGCAGCTTCTTCTTTTCCGCCGTACAGGAAATCAAATCGCCGATAATGTCTTCT
GCACGCTCATACGGGAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNASIEAARAGEHGKGFAVVAEEVRRLAEQSQQSANQISHLISGIQSEIATTTDSIMTVKTEAVNGVKMIEKNKRTFESI
DGLMEEFSVRISDLSSDARHISQSIQNITTSFTAISKEVQETSDYSQQVAGLTEEQFAAMEEVTASANELSKLAEDLHQL
IGEVKMK

Sequences:

>Translated_167_residues
MNASIEAARAGEHGKGFAVVAEEVRRLAEQSQQSANQISHLISGIQSEIATTTDSIMTVKTEAVNGVKMIEKNKRTFESI
DGLMEEFSVRISDLSSDARHISQSIQNITTSFTAISKEVQETSDYSQQVAGLTEEQFAAMEEVTASANELSKLAEDLHQL
IGEVKMK
>Mature_167_residues
MNASIEAARAGEHGKGFAVVAEEVRRLAEQSQQSANQISHLISGIQSEIATTTDSIMTVKTEAVNGVKMIEKNKRTFESI
DGLMEEFSVRISDLSSDARHISQSIQNITTSFTAISKEVQETSDYSQQVAGLTEEQFAAMEEVTASANELSKLAEDLHQL
IGEVKMK

Specific function: Signal Transducer For Aerotaxis. The Aerotactic Response Is The Accumulation Of Cells Around Air Bubbles. The Nature Of The Sensory Stimulus Detected By This Protein Is The Proton Motive Force Or Cellular Redox State. It Uses A FAD Prosthetic Group As A R

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 18223; Mature: 18223

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASIEAARAGEHGKGFAVVAEEVRRLAEQSQQSANQISHLISGIQSEIATTTDSIMTVK
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEAVNGVKMIEKNKRTFESIDGLMEEFSVRISDLSSDARHISQSIQNITTSFTAISKEVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETSDYSQQVAGLTEEQFAAMEEVTASANELSKLAEDLHQLIGEVKMK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNASIEAARAGEHGKGFAVVAEEVRRLAEQSQQSANQISHLISGIQSEIATTTDSIMTVK
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEAVNGVKMIEKNKRTFESIDGLMEEFSVRISDLSSDARHISQSIQNITTSFTAISKEVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETSDYSQQVAGLTEEQFAAMEEVTASANELSKLAEDLHQLIGEVKMK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921238; 7704255; 8969502; 9384377 [H]