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The map label for this gene is ybfH [H]

Identifier: 52784076

GI number: 52784076

Start: 226413

End: 227321

Strand: Reverse

Name: ybfH [H]

Synonym: BLi00251

Alternate gene names: 52784076

Gene position: 227321-226413 (Counterclockwise)

Preceding gene: 52784077

Following gene: 52784075

Centisome position: 5.38

GC content: 49.72

Gene sequence:

>909_bases
ATGAAGACAAGACGCGAAACCGCCGGACACCTCGCAGCTGTGATCACGATCATCATCTGGGGTACTACTTTTGTCTCAAC
AAAGGTGCTGCTCGAGGATTTCCCGCCCGTAGATATATTGTTTTACCGTTTTCTCATCGGGTTGATTGTGCTGATCATGG
TGCATCCGCATGTGCTGACTTTCCGGAGCTGGAGGCAAGAAGCGCTGTTTGCGGGAGCAGGTTTATGCGGAGTGACGCTT
TACTTTCTGTTGGAAAACATCGCGCTTACTCTTACCTACGCCTCAAACGCCGGCATGATCGTCGCGGTTATTCCGATGAT
CACCGCGGTATTGGCGCATTTTCTCCTTTCGGGCGAAAAGCTGGAGCCCCGCTTTTTCATTGGGTTCGCCGCCGCTTTCA
CTGGACTTGCGCTCATTTTCTTTAATGGACAAATGATGCTTAAATTGAATCCGCTCGGCGACATTCTCGCTGCTGCCTCC
GCATTCGTCTGGGCGGCATATGCGATTTTGATGAAAAAAATCAGCACATTCGGTTACCATACAATCCAATGCACACAGCG
GATCTTTCTGTACGGTTTGCTATTCATGGTTCCCGCTCTGTTCCTGTTTGATTTCCGCTTCGACGCAAGCCCTTTTTCCT
CCCCCGTCAATTGGTTGAACATCCTATTCTTAGGCGCGGGCGCATCTGCGCTTTGCTTTGTGACATGGAACTGGTCGGTC
GGTGTGCTTGGAGCGGTAAAAACGAGCGCTTATATCTATATGGTGCCCGTCATCACTATTGCGGCATCCGTTATCATTCT
GCAAGAAAAACTGACATGGGTTGCTTTTTGCGGAGGAGCGCTCACATTGGCCGGCCTTTATATTTCTGAAACAAAACCAA
AACCGCAGCTGAAGGAGGAACAAATTTGA

Upstream 100 bases:

>100_bases
GTGATCAGAGCCATATGACGAAATTTTTCAAGCGGCAGGTCGGGCTGACGCCGAAACAATATATGAAAATTTTTGAATAT
GACAGGCAGGAGATCAAAGG

Downstream 100 bases:

>100_bases
GGGAAGAGACAAAATGCGCACTGATCATCGATGAAAGCCTGCCGCTCGGGCTAATCGCCAATACAGCTGCCATCCTGGGG
GCGGCCCTCGGCAAAAACAA

Product: YbfH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKTRRETAGHLAAVITIIIWGTTFVSTKVLLEDFPPVDILFYRFLIGLIVLIMVHPHVLTFRSWRQEALFAGAGLCGVTL
YFLLENIALTLTYASNAGMIVAVIPMITAVLAHFLLSGEKLEPRFFIGFAAAFTGLALIFFNGQMMLKLNPLGDILAAAS
AFVWAAYAILMKKISTFGYHTIQCTQRIFLYGLLFMVPALFLFDFRFDASPFSSPVNWLNILFLGAGASALCFVTWNWSV
GVLGAVKTSAYIYMVPVITIAASVIILQEKLTWVAFCGGALTLAGLYISETKPKPQLKEEQI

Sequences:

>Translated_302_residues
MKTRRETAGHLAAVITIIIWGTTFVSTKVLLEDFPPVDILFYRFLIGLIVLIMVHPHVLTFRSWRQEALFAGAGLCGVTL
YFLLENIALTLTYASNAGMIVAVIPMITAVLAHFLLSGEKLEPRFFIGFAAAFTGLALIFFNGQMMLKLNPLGDILAAAS
AFVWAAYAILMKKISTFGYHTIQCTQRIFLYGLLFMVPALFLFDFRFDASPFSSPVNWLNILFLGAGASALCFVTWNWSV
GVLGAVKTSAYIYMVPVITIAASVIILQEKLTWVAFCGGALTLAGLYISETKPKPQLKEEQI
>Mature_302_residues
MKTRRETAGHLAAVITIIIWGTTFVSTKVLLEDFPPVDILFYRFLIGLIVLIMVHPHVLTFRSWRQEALFAGAGLCGVTL
YFLLENIALTLTYASNAGMIVAVIPMITAVLAHFLLSGEKLEPRFFIGFAAAFTGLALIFFNGQMMLKLNPLGDILAAAS
AFVWAAYAILMKKISTFGYHTIQCTQRIFLYGLLFMVPALFLFDFRFDASPFSSPVNWLNILFLGAGASALCFVTWNWSV
GVLGAVKTSAYIYMVPVITIAASVIILQEKLTWVAFCGGALTLAGLYISETKPKPQLKEEQI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33300; Mature: 33300

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRRETAGHLAAVITIIIWGTTFVSTKVLLEDFPPVDILFYRFLIGLIVLIMVHPHVLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH
FRSWRQEALFAGAGLCGVTLYFLLENIALTLTYASNAGMIVAVIPMITAVLAHFLLSGEK
HHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCC
LEPRFFIGFAAAFTGLALIFFNGQMMLKLNPLGDILAAASAFVWAAYAILMKKISTFGYH
CCCHHHHHHHHHHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TIQCTQRIFLYGLLFMVPALFLFDFRFDASPFSSPVNWLNILFLGAGASALCFVTWNWSV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCEEEEEEECCCE
GVLGAVKTSAYIYMVPVITIAASVIILQEKLTWVAFCGGALTLAGLYISETKPKPQLKEE
EEHEEHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEEECCCCCCCCCCC
QI
CC
>Mature Secondary Structure
MKTRRETAGHLAAVITIIIWGTTFVSTKVLLEDFPPVDILFYRFLIGLIVLIMVHPHVLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH
FRSWRQEALFAGAGLCGVTLYFLLENIALTLTYASNAGMIVAVIPMITAVLAHFLLSGEK
HHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCC
LEPRFFIGFAAAFTGLALIFFNGQMMLKLNPLGDILAAASAFVWAAYAILMKKISTFGYH
CCCHHHHHHHHHHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TIQCTQRIFLYGLLFMVPALFLFDFRFDASPFSSPVNWLNILFLGAGASALCFVTWNWSV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCEEEEEEECCCE
GVLGAVKTSAYIYMVPVITIAASVIILQEKLTWVAFCGGALTLAGLYISETKPKPQLKEE
EEHEEHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEEECCCCCCCCCCC
QI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]