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The map label for this gene is yacP [H]

Identifier: 52783953

GI number: 52783953

Start: 114781

End: 115293

Strand: Direct

Name: yacP [H]

Synonym: BLi00115

Alternate gene names: 52783953

Gene position: 114781-115293 (Clockwise)

Preceding gene: 52783952

Following gene: 52783954

Centisome position: 2.72

GC content: 46.98

Gene sequence:

>513_bases
ATGGACATCCTGTTGGTCGACGGTTATAACATGATTGGGGCTTGGCCTCAGCTGAAAGATTTAAAAGAAAACAGTTTTGA
AGAAGCAAGGGACCTGTTGATTCAGAAGATGGCGGAATATCAATCGTATACAGGGTTTCGGGTAATCGTTGTCTTTGATG
CGCATCTCGTTAAAGGAATCGAGAAAAAGAAGGTCAATCATCGCGTAGAAGTGATATTCACAAGGGAAAATGAAACGGCT
GATGAACGGATCGAGAAACTGGTGTCAGACTTGAATAGTATTCAGACGCAGATCCATGTTGCCACATCCGATTACACAGA
GCAGTGGGCGATTTTTGGCCAGGGGGCCCTGCGCAAATCGGCCAGAGAGCTGCTCAGGGAGGTCGAAGCGATCGAAAGGC
AAATTGAAAACAGGGTGAAACAAATCACCTCAGAGCGTCCCGCAGGGAAAATTCCATTGTCAGAAGACGTCTTGAGGATC
TTCGAAAAATGGCGGCGTGGCGACTTGGATTAG

Upstream 100 bases:

>100_bases
CGATGGCGGGAAAGGTCACATCCCTGAACGCCTCAGTTGCAGCCGGCCTGCTGATGTATGAAGTGTACCGGAAACGAAGC
CCTCTGGGAGAATAGACGGA

Downstream 100 bases:

>100_bases
GTTGACGCTTTTTTGTCCATTACTGTATAATATTTCTATCTACGTGCGGTCGGGGGGATCGGAGTGAACTTACAAAACAA
CCAGGGAAAATTCAGCAAAG

Product: YacP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MDILLVDGYNMIGAWPQLKDLKENSFEEARDLLIQKMAEYQSYTGFRVIVVFDAHLVKGIEKKKVNHRVEVIFTRENETA
DERIEKLVSDLNSIQTQIHVATSDYTEQWAIFGQGALRKSARELLREVEAIERQIENRVKQITSERPAGKIPLSEDVLRI
FEKWRRGDLD

Sequences:

>Translated_170_residues
MDILLVDGYNMIGAWPQLKDLKENSFEEARDLLIQKMAEYQSYTGFRVIVVFDAHLVKGIEKKKVNHRVEVIFTRENETA
DERIEKLVSDLNSIQTQIHVATSDYTEQWAIFGQGALRKSARELLREVEAIERQIENRVKQITSERPAGKIPLSEDVLRI
FEKWRRGDLD
>Mature_170_residues
MDILLVDGYNMIGAWPQLKDLKENSFEEARDLLIQKMAEYQSYTGFRVIVVFDAHLVKGIEKKKVNHRVEVIFTRENETA
DERIEKLVSDLNSIQTQIHVATSDYTEQWAIFGQGALRKSARELLREVEAIERQIENRVKQITSERPAGKIPLSEDVLRI
FEKWRRGDLD

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 19817; Mature: 19817

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILLVDGYNMIGAWPQLKDLKENSFEEARDLLIQKMAEYQSYTGFRVIVVFDAHLVKGI
CCEEEECCCHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHH
EKKKVNHRVEVIFTRENETADERIEKLVSDLNSIQTQIHVATSDYTEQWAIFGQGALRKS
HHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHHHH
ARELLREVEAIERQIENRVKQITSERPAGKIPLSEDVLRIFEKWRRGDLD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDILLVDGYNMIGAWPQLKDLKENSFEEARDLLIQKMAEYQSYTGFRVIVVFDAHLVKGI
CCEEEECCCHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHH
EKKKVNHRVEVIFTRENETADERIEKLVSDLNSIQTQIHVATSDYTEQWAIFGQGALRKS
HHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHHHH
ARELLREVEAIERQIENRVKQITSERPAGKIPLSEDVLRIFEKWRRGDLD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]