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The map label for this gene is yhfW [H]

Identifier: 52142381

GI number: 52142381

Start: 2983377

End: 2984954

Strand: Direct

Name: yhfW [H]

Synonym: BCZK2861

Alternate gene names: 52142381

Gene position: 2983377-2984954 (Clockwise)

Preceding gene: 52142383

Following gene: 52142371

Centisome position: 56.28

GC content: 36.06

Gene sequence:

>1578_bases
GTGAAGAATAACGATAATTATGGTGGAAAATTACCACCTAATGCTGAATCTTACTGGACGAGCAGTATTCATTTACCTGA
ATACCCTTCCTTAGAAAATGACATGCAGGTCGATGTTATTATTGTAGGAGGAGGAATTACTGGCATTACTTCTGCCTATC
TTTTAGTAAATGAAGGTCTAAAAGTCGCTGTTATAGAGGCAGACAAATTATTAAATGGAACGACTGGGCATACGACAGCT
AAAATTACTGCTCAACATGATATGATTTATGACGAGCTTATCAGATATACCGGAAGAACTACCGCAAGATTGTATTACGA
AGCAAACATCGATGCTTTAAAATTCATTCAAACCACAATTAATAAACATCAAATCGATTGCGATTTCACTCAACAAGATG
CTTATCTGTATGCCACAACAGAAGAATATGCATATAAGTTAGAAAAAGAAGCAGAAGCTTATAAAGAGCTTCATATTGAA
GGTGAGCTTGTAAACAAACTTCCTATTGATTTAAAAATACATAATGCACTTGTTATGAGAAATCAGGCACAATTCCATCC
ACTTAAATATTTAGCCCATCTTTCAAATATAATTACAGAAAAAGGTGGATACATCTTTGAAAATACCACAGCAGTAAATA
TAAAAACAGGCGAGCAACCTGTGGTTCTTACCCGTGGAGGAGCTCAAATTACAGGGAAGTATATTCTCTCTTGTTCCCAT
TTCCCTTTTTATGAAGGTGCAGGACTTTACTCTACAAGAATGCATGCAGACCGCTCTTATATAATTGCCGCTAAGACAAG
AACAGATTATCCAGGTGGTATGTATATTAGTGTAGATGAACCGACACGTTCTCTCCGTTCCACAACAATTAATGGAGAAG
AATTTATTCTTATCTCTGGAGAAAGTCATAAAACAGGACAGGGTGGAGAAACACTAAAGCATTATGAGGCCTTGGAAATA
TTTGGCCAACAAGTTTTTGGACTTGAAAGAATTGCATATCGTTGGTCAGCCCAAGATTTAATTACACTAGACAAAATTCC
TTATATCGGTGAAATCACATCTGATCAAAAAAACATATTAATTGCCACTGGATACAGAAAATGGGGTATGACTAATGGAA
CTGCAGCTGCTCTTTTATTCCGAGATATCATATTAAAAGAAAAGAACAAATTTCGGGAATTATATACTCCCTCCCGTTTC
CATATGAATCCAAGTTTAAAGAACTTCTTAGTCGAAAATGCCAATGTTGTTGGTCACTTAATTAAAGGAAAGTTAGAAAT
TCCACAAAAATGTATTCGTGATTTATCTAACGATGAAGGGGCTGTCGTTGATATTGATGGACATAGAAAAGGAGCTTATA
AAGATGCAGAAGGTAAGCTTCATATTGTAGATACAACTTGTACCCATATTGGATGTGAAGTTGAATGGAACAATGGAGAA
CGTTCTTGGGATTGTCCGTGCCATGGTTCGCGATTCTCATATACAGGAGAAGTACTTGAAGGGCCTGCTGAGAAACCATT
ACAAAAATACGATTATAAAATGATAGATAACCTTACTTCAGAAGACTCTGGTTACTAA

Upstream 100 bases:

>100_bases
ATACGCGTCCAATCACAAGTTGCTATTTTCTAAGCTCAAAGTTTACCTCTTCAATAAGTGGAAATAATAGAACTATAAAA
CTTTGGATGGAGGATTTATA

Downstream 100 bases:

>100_bases
TTAAATTTATGTAAGCCAAAACAGCTACATAGTATGTAGCTGTTTTGGCTTTTTTAACCTCGTATTGTCTGTAATCTCAA
ATCGAAATATAATCTGTTCT

Product: Rieske 2Fe-2S iron-sulfur protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MKNNDNYGGKLPPNAESYWTSSIHLPEYPSLENDMQVDVIIVGGGITGITSAYLLVNEGLKVAVIEADKLLNGTTGHTTA
KITAQHDMIYDELIRYTGRTTARLYYEANIDALKFIQTTINKHQIDCDFTQQDAYLYATTEEYAYKLEKEAEAYKELHIE
GELVNKLPIDLKIHNALVMRNQAQFHPLKYLAHLSNIITEKGGYIFENTTAVNIKTGEQPVVLTRGGAQITGKYILSCSH
FPFYEGAGLYSTRMHADRSYIIAAKTRTDYPGGMYISVDEPTRSLRSTTINGEEFILISGESHKTGQGGETLKHYEALEI
FGQQVFGLERIAYRWSAQDLITLDKIPYIGEITSDQKNILIATGYRKWGMTNGTAAALLFRDIILKEKNKFRELYTPSRF
HMNPSLKNFLVENANVVGHLIKGKLEIPQKCIRDLSNDEGAVVDIDGHRKGAYKDAEGKLHIVDTTCTHIGCEVEWNNGE
RSWDCPCHGSRFSYTGEVLEGPAEKPLQKYDYKMIDNLTSEDSGY

Sequences:

>Translated_525_residues
MKNNDNYGGKLPPNAESYWTSSIHLPEYPSLENDMQVDVIIVGGGITGITSAYLLVNEGLKVAVIEADKLLNGTTGHTTA
KITAQHDMIYDELIRYTGRTTARLYYEANIDALKFIQTTINKHQIDCDFTQQDAYLYATTEEYAYKLEKEAEAYKELHIE
GELVNKLPIDLKIHNALVMRNQAQFHPLKYLAHLSNIITEKGGYIFENTTAVNIKTGEQPVVLTRGGAQITGKYILSCSH
FPFYEGAGLYSTRMHADRSYIIAAKTRTDYPGGMYISVDEPTRSLRSTTINGEEFILISGESHKTGQGGETLKHYEALEI
FGQQVFGLERIAYRWSAQDLITLDKIPYIGEITSDQKNILIATGYRKWGMTNGTAAALLFRDIILKEKNKFRELYTPSRF
HMNPSLKNFLVENANVVGHLIKGKLEIPQKCIRDLSNDEGAVVDIDGHRKGAYKDAEGKLHIVDTTCTHIGCEVEWNNGE
RSWDCPCHGSRFSYTGEVLEGPAEKPLQKYDYKMIDNLTSEDSGY
>Mature_525_residues
MKNNDNYGGKLPPNAESYWTSSIHLPEYPSLENDMQVDVIIVGGGITGITSAYLLVNEGLKVAVIEADKLLNGTTGHTTA
KITAQHDMIYDELIRYTGRTTARLYYEANIDALKFIQTTINKHQIDCDFTQQDAYLYATTEEYAYKLEKEAEAYKELHIE
GELVNKLPIDLKIHNALVMRNQAQFHPLKYLAHLSNIITEKGGYIFENTTAVNIKTGEQPVVLTRGGAQITGKYILSCSH
FPFYEGAGLYSTRMHADRSYIIAAKTRTDYPGGMYISVDEPTRSLRSTTINGEEFILISGESHKTGQGGETLKHYEALEI
FGQQVFGLERIAYRWSAQDLITLDKIPYIGEITSDQKNILIATGYRKWGMTNGTAAALLFRDIILKEKNKFRELYTPSRF
HMNPSLKNFLVENANVVGHLIKGKLEIPQKCIRDLSNDEGAVVDIDGHRKGAYKDAEGKLHIVDTTCTHIGCEVEWNNGE
RSWDCPCHGSRFSYTGEVLEGPAEKPLQKYDYKMIDNLTSEDSGY

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=392, Percent_Identity=23.9795918367347, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 59062; Mature: 59062

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNDNYGGKLPPNAESYWTSSIHLPEYPSLENDMQVDVIIVGGGITGITSAYLLVNEGL
CCCCCCCCCCCCCCCHHHEECEECCCCCCCCCCCCEEEEEEECCCHHHHHHEEEEEECCC
KVAVIEADKLLNGTTGHTTAKITAQHDMIYDELIRYTGRTTARLYYEANIDALKFIQTTI
EEEEEEHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH
NKHQIDCDFTQQDAYLYATTEEYAYKLEKEAEAYKELHIEGELVNKLPIDLKIHNALVMR
CCEEECCCEECCCEEEEEECHHHHHHHHHHHHHHHHEECCCEECCCCCCEEEECCEEEEC
NQAQFHPLKYLAHLSNIITEKGGYIFENTTAVNIKTGEQPVVLTRGGAQITGKYILSCSH
CCCCCCHHHHHHHHHHHHHCCCCEEEECEEEEEEECCCCCEEEECCCCEEEEEEEEEECC
FPFYEGAGLYSTRMHADRSYIIAAKTRTDYPGGMYISVDEPTRSLRSTTINGEEFILISG
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHEECCCCEEEEEEC
ESHKTGQGGETLKHYEALEIFGQQVFGLERIAYRWSAQDLITLDKIPYIGEITSDQKNIL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCCEECCCCCCEE
IATGYRKWGMTNGTAAALLFRDIILKEKNKFRELYTPSRFHMNPSLKNFLVENANVVGHL
EEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCHHEEHH
IKGKLEIPQKCIRDLSNDEGAVVDIDGHRKGAYKDAEGKLHIVDTTCTHIGCEVEWNNGE
HCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCC
RSWDCPCHGSRFSYTGEVLEGPAEKPLQKYDYKMIDNLTSEDSGY
CCCCCCCCCCCCEECCHHHCCCCCCHHHHHCHHHHHCCCCCCCCC
>Mature Secondary Structure
MKNNDNYGGKLPPNAESYWTSSIHLPEYPSLENDMQVDVIIVGGGITGITSAYLLVNEGL
CCCCCCCCCCCCCCCHHHEECEECCCCCCCCCCCCEEEEEEECCCHHHHHHEEEEEECCC
KVAVIEADKLLNGTTGHTTAKITAQHDMIYDELIRYTGRTTARLYYEANIDALKFIQTTI
EEEEEEHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH
NKHQIDCDFTQQDAYLYATTEEYAYKLEKEAEAYKELHIEGELVNKLPIDLKIHNALVMR
CCEEECCCEECCCEEEEEECHHHHHHHHHHHHHHHHEECCCEECCCCCCEEEECCEEEEC
NQAQFHPLKYLAHLSNIITEKGGYIFENTTAVNIKTGEQPVVLTRGGAQITGKYILSCSH
CCCCCCHHHHHHHHHHHHHCCCCEEEECEEEEEEECCCCCEEEECCCCEEEEEEEEEECC
FPFYEGAGLYSTRMHADRSYIIAAKTRTDYPGGMYISVDEPTRSLRSTTINGEEFILISG
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHEECCCCEEEEEEC
ESHKTGQGGETLKHYEALEIFGQQVFGLERIAYRWSAQDLITLDKIPYIGEITSDQKNIL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCCEECCCCCCEE
IATGYRKWGMTNGTAAALLFRDIILKEKNKFRELYTPSRFHMNPSLKNFLVENANVVGHL
EEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCHHEEHH
IKGKLEIPQKCIRDLSNDEGAVVDIDGHRKGAYKDAEGKLHIVDTTCTHIGCEVEWNNGE
HCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCC
RSWDCPCHGSRFSYTGEVLEGPAEKPLQKYDYKMIDNLTSEDSGY
CCCCCCCCCCCCEECCHHHCCCCCCHHHHHCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]