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The map label for this gene is ygdL [H]

Identifier: 52141725

GI number: 52141725

Start: 3651001

End: 3651897

Strand: Direct

Name: ygdL [H]

Synonym: BCZK3522

Alternate gene names: 52141725

Gene position: 3651001-3651897 (Clockwise)

Preceding gene: 52141728

Following gene: 52141724

Centisome position: 68.87

GC content: 38.35

Gene sequence:

>897_bases
ATGTTAAAGCAAAACGAAAGACTTATGTACAAATCTGAAGCATTTGATAACGAGATGTATTGGGAACGCGTAAACCGAAG
CCTTGGATGGTTAGGTAGCACCGAGGAAGAACAAGTACAAAGACAGAAAAAACTACGTGATGCTGTTGTTGGAATTACTG
GAACTGGTGGTATTGGAGGAGCACTTGCTGCACGCCTTGTTAGAATGGGAGTAAGAAATTTAAAACTTGCAGATCCAGAT
ACATTTGATGTTACGAATATGAATAGACAAATGGGTGCTGATTTGGATCATCTAGGAAAAAATAAAGCTGAAGTTGTTGC
TGAAATGACTTACAATCTTACGAAAGATGTAAACATAGAGGTATATCCAGAGGGGATTACTCCTGAAAGTGCTGAAGAAT
TTATGAAGGATTGTGATTACGTTTTAGACCAGATGGATTTTTACGAAGTTCGTAATCGATATGCCTTACATCGTGCTTTT
CGAAAATCAGACCGTTGTAAATTCATGTTAAAGGTTCCTACAGTTGCTCATGGTACATATATTTATAAATACACAAAAGA
TTCTATGCCTATCGAAGAAGTATATGGAATTCCTGAAGATGCTGCAATGACTCCAGAGGTTATTAAACGACTTATGGAAC
GCCTTATCCCTGAAATGCCTTCATATCCAAGTAAAGAAATGTTAGACCATTGGTTTGTCGACTTAGAGAGAATGCCTATT
TTTGCTGGATGCCCACCGCTTGCAGAAGGTGTTTTAGCAGAACGATTAGCATTAGCTATTACAGAACTTGATCAATTGCC
AGGTGCTCAACAATTACCAGTTCAACCGGGATACGCTATGTTTGATACTATGGCTTGGCAATCTAAAATTGTTCATGGTA
AGTGGTGGTCTGAATGA

Upstream 100 bases:

>100_bases
CTCCTTAAACGATTTGATAAAAACGAAATCGATAGATTATTAAGATAATTTTATTTTATCATTACATTGAAAGTAAAAAC
ACTTAAGGGGGAAATTTATT

Downstream 100 bases:

>100_bases
TTCGACCTGTAAAGAAAGTCATTTTATTCTCAGAAGTTAATTCAAAATTTGGTTTACCGTTTCTTCAGGAATTAATACAA
GAGCCTTCTATTTCCGTAGA

Product: molybdopterin and thiamine biosynthesis dinucleotide-utilizing enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MLKQNERLMYKSEAFDNEMYWERVNRSLGWLGSTEEEQVQRQKKLRDAVVGITGTGGIGGALAARLVRMGVRNLKLADPD
TFDVTNMNRQMGADLDHLGKNKAEVVAEMTYNLTKDVNIEVYPEGITPESAEEFMKDCDYVLDQMDFYEVRNRYALHRAF
RKSDRCKFMLKVPTVAHGTYIYKYTKDSMPIEEVYGIPEDAAMTPEVIKRLMERLIPEMPSYPSKEMLDHWFVDLERMPI
FAGCPPLAEGVLAERLALAITELDQLPGAQQLPVQPGYAMFDTMAWQSKIVHGKWWSE

Sequences:

>Translated_298_residues
MLKQNERLMYKSEAFDNEMYWERVNRSLGWLGSTEEEQVQRQKKLRDAVVGITGTGGIGGALAARLVRMGVRNLKLADPD
TFDVTNMNRQMGADLDHLGKNKAEVVAEMTYNLTKDVNIEVYPEGITPESAEEFMKDCDYVLDQMDFYEVRNRYALHRAF
RKSDRCKFMLKVPTVAHGTYIYKYTKDSMPIEEVYGIPEDAAMTPEVIKRLMERLIPEMPSYPSKEMLDHWFVDLERMPI
FAGCPPLAEGVLAERLALAITELDQLPGAQQLPVQPGYAMFDTMAWQSKIVHGKWWSE
>Mature_298_residues
MLKQNERLMYKSEAFDNEMYWERVNRSLGWLGSTEEEQVQRQKKLRDAVVGITGTGGIGGALAARLVRMGVRNLKLADPD
TFDVTNMNRQMGADLDHLGKNKAEVVAEMTYNLTKDVNIEVYPEGITPESAEEFMKDCDYVLDQMDFYEVRNRYALHRAF
RKSDRCKFMLKVPTVAHGTYIYKYTKDSMPIEEVYGIPEDAAMTPEVIKRLMERLIPEMPSYPSKEMLDHWFVDLERMPI
FAGCPPLAEGVLAERLALAITELDQLPGAQQLPVQPGYAMFDTMAWQSKIVHGKWWSE

Specific function: Unknown

COG id: COG0476

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Homo sapiens, GI4885649, Length=160, Percent_Identity=30.625, Blast_Score=68, Evalue=8e-12,
Organism=Escherichia coli, GI1789177, Length=133, Percent_Identity=33.8345864661654, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24660640, Length=142, Percent_Identity=30.9859154929577, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 34221; Mature: 34221

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQNERLMYKSEAFDNEMYWERVNRSLGWLGSTEEEQVQRQKKLRDAVVGITGTGGIGG
CCCCCCCCEEHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHH
ALAARLVRMGVRNLKLADPDTFDVTNMNRQMGADLDHLGKNKAEVVAEMTYNLTKDVNIE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCEE
VYPEGITPESAEEFMKDCDYVLDQMDFYEVRNRYALHRAFRKSDRCKFMLKVPTVAHGTY
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCE
IYKYTKDSMPIEEVYGIPEDAAMTPEVIKRLMERLIPEMPSYPSKEMLDHWFVDLERMPI
EEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCE
FAGCPPLAEGVLAERLALAITELDQLPGAQQLPVQPGYAMFDTMAWQSKIVHGKWWSE
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKQNERLMYKSEAFDNEMYWERVNRSLGWLGSTEEEQVQRQKKLRDAVVGITGTGGIGG
CCCCCCCCEEHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHH
ALAARLVRMGVRNLKLADPDTFDVTNMNRQMGADLDHLGKNKAEVVAEMTYNLTKDVNIE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCEE
VYPEGITPESAEEFMKDCDYVLDQMDFYEVRNRYALHRAFRKSDRCKFMLKVPTVAHGTY
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCE
IYKYTKDSMPIEEVYGIPEDAAMTPEVIKRLMERLIPEMPSYPSKEMLDHWFVDLERMPI
EEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCE
FAGCPPLAEGVLAERLALAITELDQLPGAQQLPVQPGYAMFDTMAWQSKIVHGKWWSE
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]