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The map label for this gene is rimP

Identifier: 52141671

GI number: 52141671

Start: 3709140

End: 3709610

Strand: Reverse

Name: rimP

Synonym: BCZK3576

Alternate gene names: 52141671

Gene position: 3709610-3709140 (Counterclockwise)

Preceding gene: 52141670

Following gene: 52141674

Centisome position: 69.98

GC content: 38.22

Gene sequence:

>471_bases
ATGGATAAGAAAGTCACAGAAGTTGTAGAAGCATTTGCGCAGCCAATCGTTGAAGAGTTAAATCTTGAACTTGTAGATGT
AGAGTATGTGAAAGAAGGACAAGACTGGTTCTTACGCGTATTCATCGATTCTGAAAAGGGAGTCGACATTGAAGAATGCG
GTGCGGTGAGTGAACGTTTAAGCGAAGCTTTAGATAAAGAGGATCCAATTCCTCATCTTTACTTTTTGGATGTGTCATCT
CCTGGAGCAGAACGTCCATTAAAGAAAGAGAAAGACTTCCAGCAAGCGGTAGGAAAACAAGTGGCAATTAAAACATATGA
GCCAATTGATGGTGAAAAGATGTTTGAAGGAAAAATGCTTTCCTACGATGGTACTACAATTACACTATTATTAACAATTA
AAACACGTAAAAAAGAAATCCAAATTCCAATGGACAAAGTTGCAAATGCGCGACTTGCTGTTACGTTTTAG

Upstream 100 bases:

>100_bases
CAGGGGCTTTTGTTAGCTAACGAGAAAGAATAAGATAGACCGTTCTATGGACGGGGTCTTTTCTTGTGAATGGTACATGG
CGGCAGGAAGGAGGCTGTTT

Downstream 100 bases:

>100_bases
TTAGAAGGGGGATCTTCATGAGCACTGAGTTGTTAGATGCCTTGCTCGTATTAGAGTCAGAAAAAGGAATTAGCAAAGAT
ATTATTATTGATGCGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSS
PGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKMLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF

Sequences:

>Translated_156_residues
MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSS
PGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKMLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF
>Mature_156_residues
MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSS
PGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKMLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=129, Percent_Identity=37.2093023255814, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_BACAA (C3P5L9)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002868055.1
- ProteinModelPortal:   C3P5L9
- SMR:   C3P5L9
- EnsemblBacteria:   EBBACT00000127612
- GeneID:   7850437
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_3978
- GeneTree:   EBGT00050000001558
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17697; Mature: 17697

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERL
CCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHH
SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKML
HHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCEECCCEEE
SYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF
EECCCEEEEEEEEECCCCEEECCHHHHCCCEEEEEC
>Mature Secondary Structure
MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERL
CCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHH
SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKML
HHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCEECCCEEE
SYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF
EECCCEEEEEEEEECCCCEEECCHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA