Click here to switch to the map view.

The map label for this gene is yknX [H]

Identifier: 52140308

GI number: 52140308

Start: 5046078

End: 5047271

Strand: Reverse

Name: yknX [H]

Synonym: BCZK4952

Alternate gene names: 52140308

Gene position: 5047271-5046078 (Counterclockwise)

Preceding gene: 52140305

Following gene: 52140309

Centisome position: 95.22

GC content: 38.78

Gene sequence:

>1194_bases
ATGGTACCAAATACGGTTCGTACTCCAAACAAGAAGAAGAAATGGATTATTATCGGGGTTATTGCACTAATTGTTATTGT
AGCAGCAGTTAATATTTTTGTTATGCAAGGGAAGAAGAAGGGAGCATCAACATCGGCTGATGCTGTAAGTTTTGAGAAGG
TAACGGAGCGAAAGCTGAATAATACGAAGTTAATTTCTGGTCAGGTGAAGCCTGGGAATATCGAAAGTTTTTATGCGGAT
CCGGCCAAAGGGAAAGTGAAAGATATTGAGGTAAAAGAAGGCCAAGAGGTAGAGAAAGGTGCGAAGTTATTCTCTTATGA
TAATGAAGAGATTAATTTGCAAATGAAGCAAGCTGATCTTGATCAGAAGATGGCTGATATGCGTTATGATCAAGGGAAGA
AGAAGATTGATTCGCTGAAAAAAGAAATTAAGAAAGCGAAAGATAGCGGAGCTGGGAAAGAAGTAACAGATCCGATGGAA
GAGCAAGTAAGTGAGTTAGAGATAGCGCAAAAGACAACTGATCTGGAGAAAGAGAAAGGGAAGTTGCAGAAAGAAGAGTT
AAGTAAAAAGCAGAAAGAGCTTACGATTTATAGTAACTTTGCTGGTGTTGTTCAAAAGTTAGATAAAGATGCGGCACAAA
GTTCATCTCAAGCGTTAGGTGGTCAAGGGAAAGCCTTCTTACAAGTGGCTTCTAAAGATCCGTTCCAAATTCAAGGGACG
TTAACTGAGCTTCAAAAGTCACAAATTCAAAAAGATCAAACATTTACTGTTACTGCGAAAGCAAATAATAAGAAGAAGTG
GACAGGTAAGATTACAGAAGTAAGTGAATTCCCAACGAGTACAGAGATGGCGCAAGCTGGTGGTATGGGTGAAGCGACTC
AAAATATGTCTCAATATACATATAAAGCAAGCCTTGATAGTCAAGATGGTTTATCTCCAGGTTATCATGTTTCTCTGCAA
GTAAATTTAGAGAATAAGACGATGGTTGCTGTTCCGACTAAGAGCATTGTAGAAAAAGATGATGATGCATTTGTTTATGT
TGAGGATAAAGGAAAGCTTCGTAAACAAAATGTGAAAAAAGGTTCTACTGATGGAGACTGGACAGAGATTACTGAAGGCG
TAACAGTGGGGCAAAAGGTGGTTAAAAATCCTTCCGACGATGTGTATGACGGAATGGAAGTGAAAGAGAAATGA

Upstream 100 bases:

>100_bases
GTAAAACTTTGTAAAAAGAATGTAATAATATGTAATTCATTTTCAGAAAGTTTTATACAATTTTTATATTAAACTATTAA
GTTATAAAAGGAGAGAGAAT

Downstream 100 bases:

>100_bases
TTACGCTAAATCATATTGCTAAAACGTATTATCAAGGAAAATTGGCAGTGCCGATTTTGCACGGTATTAGTTTAACGATT
CAGAGCGGCGAGTTCGTTTC

Product: efflux system, periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLNNTKLISGQVKPGNIESFYAD
PAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADLDQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPME
EQVSELEIAQKTTDLEKEKGKLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSTEMAQAGGMGEATQNMSQYTYKASLDSQDGLSPGYHVSLQ
VNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKKGSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK

Sequences:

>Translated_397_residues
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLNNTKLISGQVKPGNIESFYAD
PAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADLDQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPME
EQVSELEIAQKTTDLEKEKGKLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSTEMAQAGGMGEATQNMSQYTYKASLDSQDGLSPGYHVSLQ
VNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKKGSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK
>Mature_397_residues
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLNNTKLISGQVKPGNIESFYAD
PAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADLDQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPME
EQVSELEIAQKTTDLEKEKGKLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSTEMAQAGGMGEATQNMSQYTYKASLDSQDGLSPGYHVSLQ
VNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKKGSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43825; Mature: 43825

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLN
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCC
NTKLISGQVKPGNIESFYADPAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADL
CCEEEECCCCCCCCHHEECCCCCCCEEEEECCCCCCHHHCCHHHCCCCCEEEEEEEHHHH
DQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPMEEQVSELEIAQKTTDLEKEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
KLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
CCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHH
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSTEMAQAGGMGEATQNMSQYT
HHHHHHHHHCCCCEEEEEEECCCCCEECCCCEEHHHCCCHHHHHHCCCCCHHHHHHHHEE
YKASLDSQDGLSPGYHVSLQVNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKK
EEECCCCCCCCCCCEEEEEEEEECCCEEEEECCHHHHCCCCCEEEEECCCCCHHHHHCCC
GSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLN
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCC
NTKLISGQVKPGNIESFYADPAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADL
CCEEEECCCCCCCCHHEECCCCCCCEEEEECCCCCCHHHCCHHHCCCCCEEEEEEEHHHH
DQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPMEEQVSELEIAQKTTDLEKEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
KLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
CCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHH
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSTEMAQAGGMGEATQNMSQYT
HHHHHHHHHCCCCEEEEEEECCCCCEECCCCEEHHHCCCHHHHHHCCCCCHHHHHHHHEE
YKASLDSQDGLSPGYHVSLQVNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKK
EEECCCCCCCCCCCEEEEEEEEECCCEEEEECCHHHHCCCCCEEEEECCCCCHHHHHCCC
GSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]