| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is nuoI2
Identifier: 51893910
GI number: 51893910
Start: 2992055
End: 2992777
Strand: Reverse
Name: nuoI2
Synonym: STH2772
Alternate gene names: 51893910
Gene position: 2992777-2992055 (Counterclockwise)
Preceding gene: 51893911
Following gene: 51893909
Centisome position: 83.92
GC content: 66.67
Gene sequence:
>723_bases ATGGGCGTTACCAACTTCTTCGGGGAGGCATGGCGCACCGGGAAGTCCATCGTCACCGGACTCGGCATCACGTTCCGGGA GATGATGTTCCGGCCGGCCATCACCGTGTTCTACCCCGAGCAGCGTGACGACGTGCCCCCCTGGTTCCGGGGCATCCCGG TCCTGAAGACCGACCTGCGCACCGGCGAGTACAAGTGCACGTCCTGCATGCAGTGCGCGCAGGCCTGTCCGGTGAACGTC ATCACGATCGAGTGGCACCAGGACCCGGAGACCAAGAAGAAGGTCTGTGACCGGTTCGCCATCGACATGTCCCGGTGCAT GCTCTGCAACTTCTGCGTCGAGGCGTGCCCCTTCGACTCCCTGGTCATGGGTTACGACTACGAGCTCTGCAAGGTGAACC CGGAGAACCTGGTCTTCGAGTTCGAGGACCTGCTCAGGCTCGGGCTGAAGTACTCGAAGGCCGAGGAGCCCGGCCCCAAG GCCACCCGCTCGTCCACGCCGCCCTGGGTCTTCCACGGGCTGACCAACGCCACGGAGGACGACATTCAGGACATCCACGG GTACCTGGGGCGTCCGCCCCTGCCCAAGGGATACGAGCCTGAGCTGAAGCCGCAGTTCCGGAAGCCGGCCGAGGAGGCCG CGGAGGCGCAGCAGGCGGAGGCCGCGGGCCAGCCGGCAGCGGAGCCGGGCAAGACCAACGGGGAGGAGGCCGGGCAGCCG TGA
Upstream 100 bases:
>100_bases TCCGGTACCTCGCCGTCGCGTTCGACGGGGTGCCGATCTCCATCGGATCCTTCACGCTGCGGCTCCTGGGCTGGTGGCTC TAAGGGAGGTGTGAACCTGC
Downstream 100 bases:
>100_bases CAACAGACCTGCTCATGAGCGGCCAGTTCTGGACCTTCATCATCCTCGCGGTGGTCACCCTGGTGTCGACCTACCGCATG GTCACCACGCCGCTCATCAC
Product: NADH dehydrogenase I subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I 2; NDH-1 subunit I 2
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGVTNFFGEAWRTGKSIVTGLGITFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNV ITIEWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENLVFEFEDLLRLGLKYSKAEEPGPK ATRSSTPPWVFHGLTNATEDDIQDIHGYLGRPPLPKGYEPELKPQFRKPAEEAAEAQQAEAAGQPAAEPGKTNGEEAGQP
Sequences:
>Translated_240_residues MGVTNFFGEAWRTGKSIVTGLGITFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNV ITIEWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENLVFEFEDLLRLGLKYSKAEEPGPK ATRSSTPPWVFHGLTNATEDDIQDIHGYLGRPPLPKGYEPELKPQFRKPAEEAAEAQQAEAAGQPAAEPGKTNGEEAGQP >Mature_239_residues GVTNFFGEAWRTGKSIVTGLGITFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNVI TIEWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENLVFEFEDLLRLGLKYSKAEEPGPKA TRSSTPPWVFHGLTNATEDDIQDIHGYLGRPPLPKGYEPELKPQFRKPAEEAAEAQQAEAAGQPAAEPGKTNGEEAGQP
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI4505371, Length=135, Percent_Identity=35.5555555555556, Blast_Score=88, Evalue=7e-18, Organism=Escherichia coli, GI1788617, Length=144, Percent_Identity=36.8055555555556, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17555194, Length=148, Percent_Identity=33.7837837837838, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI17864306, Length=148, Percent_Identity=35.1351351351351, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NUOI2_SYMTH (Q67KP1)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076601.1 - ProteinModelPortal: Q67KP1 - SMR: Q67KP1 - GeneID: 2979666 - GenomeReviews: AP006840_GR - KEGG: sth:STH2772 - NMPDR: fig|292459.1.peg.2649 - OMA: VITIEWH - BioCyc: STHE292459:STH2772-MONOMER - BRENDA: 1.6.99.5 - HAMAP: MF_01351 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR010226
Pfam domain/function: PF00037 Fer4
EC number: =1.6.99.5
Molecular weight: Translated: 26924; Mature: 26793
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTNFFGEAWRTGKSIVTGLGITFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLR CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCHHHHCCC TGEYKCTSCMQCAQACPVNVITIEWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDS CCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LVMGYDYELCKVNPENLVFEFEDLLRLGLKYSKAEEPGPKATRSSTPPWVFHGLTNATED HHHCCCCEEEEECHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCHH DIQDIHGYLGRPPLPKGYEPELKPQFRKPAEEAAEAQQAEAAGQPAAEPGKTNGEEAGQP HHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GVTNFFGEAWRTGKSIVTGLGITFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLR CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCHHHHCCC TGEYKCTSCMQCAQACPVNVITIEWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDS CCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LVMGYDYELCKVNPENLVFEFEDLLRLGLKYSKAEEPGPKATRSSTPPWVFHGLTNATED HHHCCCCEEEEECHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCHH DIQDIHGYLGRPPLPKGYEPELKPQFRKPAEEAAEAQQAEAAGQPAAEPGKTNGEEAGQP HHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA