Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893896

Identifier: 51893896

GI number: 51893896

Start: 2977137

End: 2978072

Strand: Reverse

Name: 51893896

Synonym: STH2758

Alternate gene names: NA

Gene position: 2978072-2977137 (Counterclockwise)

Preceding gene: 51893897

Following gene: 51893895

Centisome position: 83.51

GC content: 68.91

Gene sequence:

>936_bases
GTGGACAAGGGGGCCGGCCCGTCGGACGGGTCACAGGCCACAGCCCCGGAACGCGACTGGGAGGAGCAGGCGCGCAGGGC
GGACGAGCGGCTGGCCGAGTTGCGCCGGGAGCTCAGTCATCCCGTCTTCGTGCCCACGCAGGTGCCCGAAGGTCTCCACC
CCCAGATGCCGTCGCAGAGCGATCGGCTGGTGAGCATCGCCTACGTCGACGATGACCTCAACCGAGTGCTCAGAGTGTCC
AGCGGTCCCCTGGGGTGCTGCATCGACGCCGACCCGAACAAGATGGTCGCCGGCGGCACGCCCATCCGCGACGGCCGTGA
GGCGCGCTTTATCCCATACCAGCCCGAGTTCGGCGGGAACATCCTCTGGTGGCAGGAGGACGGGGCCTACGTCGCGCTTT
CCGGCCCGCACCTGACGGAGGAGGACCTCTTCGCCATCGCCGAGTTCCTGTCGCCTACGGCGACCCTGACAGGCCCGCCG
GACGCGCTGCCTCCCGACGTCTACCCGCCGGACTACCGCACGGAGGTTCCCCAAGTCGACGCGGTGATCGACGCCTTCCT
GGCCAAGGATGTCCACCGTCTGGCATCCTGCGACATGCTCCGCTGCGAGGAGGGCGCGGAAGGCGCGCTGGAGCCCGTGG
TGACGTGGGGGTCCTGTGAGGTCAACAACACCTGGACGGGATGGGACACCGTCCGCAGCCTGGTGGAGGGCTGGGTGGGG
GAACCGCGCCTGCTCTACGCTGCCTACCGCGTGCAGGGCATCGGGGACTGGGCCTATCTCGTGCAGTTCGCGAAGTACCG
CCACGACCAACGGCCCAAGTCTGCGGTCCTGGACGGCGAGGGACGGATCCTGCAGCTGTGGATGGGCTGCGGCGCGCTGT
TCGACATGCAGGCTGACCATTATGAGCCCATCGCACCGCCGCGCACCGGTCTGTAG

Upstream 100 bases:

>100_bases
CACCAGTCCGACGGATGGTCAGGGGGCGGCGCCGCCGGCCGCGCCCGAAGGCACGGCGGCGCCACCGGGGGAGGCGCAGG
CGCCCGGGTTCTCAGGGGGC

Downstream 100 bases:

>100_bases
TCTGTCCCGGCTTTCTGCCGAACACCCCGTGCCGCGGCATGAAGGCCACCGACCGCGCGGCATCCCGTTGCCTTCCCGAA
ATTGCCGGAACCTTTCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQSDRLVSIAYVDDDLNRVLRVS
SGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGNILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPP
DALPPDVYPPDYRTEVPQVDAVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG
EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADHYEPIAPPRTGL

Sequences:

>Translated_311_residues
MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQSDRLVSIAYVDDDLNRVLRVS
SGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGNILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPP
DALPPDVYPPDYRTEVPQVDAVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG
EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADHYEPIAPPRTGL
>Mature_311_residues
MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQSDRLVSIAYVDDDLNRVLRVS
SGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGNILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPP
DALPPDVYPPDYRTEVPQVDAVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG
EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADHYEPIAPPRTGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34416; Mature: 34416

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
DRLVSIAYVDDDLNRVLRVSSGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGN
CCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCCCC
ILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPPDALPPDVYPPDYRTEVPQVD
EEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG
HHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHCC
EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADH
CCCEEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHCCHHCCCCCCC
YEPIAPPRTGL
CCCCCCCCCCC
>Mature Secondary Structure
MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
DRLVSIAYVDDDLNRVLRVSSGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGN
CCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCCCC
ILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPPDALPPDVYPPDYRTEVPQVD
EEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG
HHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHCC
EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADH
CCCEEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHCCHHCCCCCCC
YEPIAPPRTGL
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA