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The map label for this gene is yfiS [H]

Identifier: 51893880

GI number: 51893880

Start: 2948439

End: 2949674

Strand: Reverse

Name: yfiS [H]

Synonym: STH2742

Alternate gene names: 51893880

Gene position: 2949674-2948439 (Counterclockwise)

Preceding gene: 51893881

Following gene: 51893879

Centisome position: 82.71

GC content: 66.59

Gene sequence:

>1236_bases
TTGGAGGTTGGTGTCATGCACGAAGAGCGGGGAGTACTGGCTCTGCTGCGTCATCGGAACTACATGCTCTACTGGTTCGG
CTTCCTCGTCTCCAACGCCGGGGCCTGGATTCAGTCCGTCGCCCAGGGATGGCTGGTCTACGACCTTTCCAACAGCGCAG
CCTGGCTGGGCACGGTTGGCTTTGTGCGGGCATTCCCGCTGATCTTCCTGTCGCTGATCGGCGGCACGGTGGCCGACCGG
CTGCCCAAGCGGAGGATTCTGTACGTCACCCAGACGGTGCAGATGATCAGCGCTGCGCTCCTGGGGACGCTGACGCTGCT
GGGGCACATCCAGGTCTGGCACGTGGTCCTGCTCTCGGCCGTCTCCGCCTGTGCGCAGGCGTTCGACCAGCCGGCCCGCC
ACGCGCTGGTCCCGCACCTGGTGCCCCGCCACAACCTGCACGCCGCCATCTCGTTCAACTCCATCGCCTTCAACGGCGCC
GCCCTGTTCGGGCCGTCGCTGACGGGGGTGCTGGTGCCGCTGATCGGGTTTGCCGGCTGCTTCTACGTGAACGCGGTCAG
CTTTGTCGCGGTGTTCATCGCGCTGGCGCTCATGGAGTTTCCGCCCCACGCGCCCGGGGGTGGGAAGACGTCGATGCTCG
AGGACCTGCGGGCCGGCCTCTCGTTCATCGGGCACAACCAGGTCATCCTGGCGCTCATCTCCATGGCCGCGGTGACGTCC
TTCTTCGCCCGGCCGTATCAGCAGTTCATCACGGTGTTCGCCCGGGACGTGGTGCACGGCGACGTGGACACGGCCGGCCT
CATGCAGGCCGCCCCGGCCCTGGGCACCGTGATCTTCATGCTGGCCATCGCCTCCGCGACCAACATTCAGTGGAAAGGGA
AGCTGCTGCTGGGCGCGGGCATTCTGTTCCCCGCCTCGCTGATCGCCTTCAGCTGGTCGACCAACCTGTACGTGTCGCTG
GCGCTGCTGGTGCTGGTCGGCGGGCTGAACATGACCTGGCAGACGACGCTGAACACCCTGCTGCAGACCAACGTGGGCGA
CGAGATGCGCGGCCGGGTCATGTCGGCCTACACCATGACGGCCCTGGCGATGATGCCCCTGGGCCAGGGACCGATGGGGA
TGGCCTTCGACTACCTCGGCCCCTCCCTGGCCCTGACCCTGAACGCGCTGATCGCGCTCGCCTGGACCGTCTACATGGGA
CTCATCCGGGTGAAGGCGATTCGCACCCTCCCCTAG

Upstream 100 bases:

>100_bases
TGGGTGAGCCCCTTTTGGCGCCGACCACGGAGCTTGCGGAAGGAATGCGAAAGGATCACGGCAAATACTTAATGAGATGA
AGTAAACGCTGCGGCCCCTG

Downstream 100 bases:

>100_bases
CCGCTTCAGGAAAATTGCAGCCTATTCTTGCAGGAAGCGGGGCCGCCTTCACGGAATATGCATGATTGCATACCGAGTGA
AGGAGGTTGGTGCTCATGGC

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MEVGVMHEERGVLALLRHRNYMLYWFGFLVSNAGAWIQSVAQGWLVYDLSNSAAWLGTVGFVRAFPLIFLSLIGGTVADR
LPKRRILYVTQTVQMISAALLGTLTLLGHIQVWHVVLLSAVSACAQAFDQPARHALVPHLVPRHNLHAAISFNSIAFNGA
ALFGPSLTGVLVPLIGFAGCFYVNAVSFVAVFIALALMEFPPHAPGGGKTSMLEDLRAGLSFIGHNQVILALISMAAVTS
FFARPYQQFITVFARDVVHGDVDTAGLMQAAPALGTVIFMLAIASATNIQWKGKLLLGAGILFPASLIAFSWSTNLYVSL
ALLVLVGGLNMTWQTTLNTLLQTNVGDEMRGRVMSAYTMTALAMMPLGQGPMGMAFDYLGPSLALTLNALIALAWTVYMG
LIRVKAIRTLP

Sequences:

>Translated_411_residues
MEVGVMHEERGVLALLRHRNYMLYWFGFLVSNAGAWIQSVAQGWLVYDLSNSAAWLGTVGFVRAFPLIFLSLIGGTVADR
LPKRRILYVTQTVQMISAALLGTLTLLGHIQVWHVVLLSAVSACAQAFDQPARHALVPHLVPRHNLHAAISFNSIAFNGA
ALFGPSLTGVLVPLIGFAGCFYVNAVSFVAVFIALALMEFPPHAPGGGKTSMLEDLRAGLSFIGHNQVILALISMAAVTS
FFARPYQQFITVFARDVVHGDVDTAGLMQAAPALGTVIFMLAIASATNIQWKGKLLLGAGILFPASLIAFSWSTNLYVSL
ALLVLVGGLNMTWQTTLNTLLQTNVGDEMRGRVMSAYTMTALAMMPLGQGPMGMAFDYLGPSLALTLNALIALAWTVYMG
LIRVKAIRTLP
>Mature_411_residues
MEVGVMHEERGVLALLRHRNYMLYWFGFLVSNAGAWIQSVAQGWLVYDLSNSAAWLGTVGFVRAFPLIFLSLIGGTVADR
LPKRRILYVTQTVQMISAALLGTLTLLGHIQVWHVVLLSAVSACAQAFDQPARHALVPHLVPRHNLHAAISFNSIAFNGA
ALFGPSLTGVLVPLIGFAGCFYVNAVSFVAVFIALALMEFPPHAPGGGKTSMLEDLRAGLSFIGHNQVILALISMAAVTS
FFARPYQQFITVFARDVVHGDVDTAGLMQAAPALGTVIFMLAIASATNIQWKGKLLLGAGILFPASLIAFSWSTNLYVSL
ALLVLVGGLNMTWQTTLNTLLQTNVGDEMRGRVMSAYTMTALAMMPLGQGPMGMAFDYLGPSLALTLNALIALAWTVYMG
LIRVKAIRTLP

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44219; Mature: 44219

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVGVMHEERGVLALLRHRNYMLYWFGFLVSNAGAWIQSVAQGWLVYDLSNSAAWLGTVG
CCCCCEECCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCCCHHHHHHH
FVRAFPLIFLSLIGGTVADRLPKRRILYVTQTVQMISAALLGTLTLLGHIQVWHVVLLSA
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSACAQAFDQPARHALVPHLVPRHNLHAAISFNSIAFNGAALFGPSLTGVLVPLIGFAGC
HHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEECCEEECCCHHCCCCHHHHHHHHHHHHHH
FYVNAVSFVAVFIALALMEFPPHAPGGGKTSMLEDLRAGLSFIGHNQVILALISMAAVTS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FFARPYQQFITVFARDVVHGDVDTAGLMQAAPALGTVIFMLAIASATNIQWKGKLLLGAG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEECCH
ILFPASLIAFSWSTNLYVSLALLVLVGGLNMTWQTTLNTLLQTNVGDEMRGRVMSAYTMT
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ALAMMPLGQGPMGMAFDYLGPSLALTLNALIALAWTVYMGLIRVKAIRTLP
HHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEVGVMHEERGVLALLRHRNYMLYWFGFLVSNAGAWIQSVAQGWLVYDLSNSAAWLGTVG
CCCCCEECCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCCCHHHHHHH
FVRAFPLIFLSLIGGTVADRLPKRRILYVTQTVQMISAALLGTLTLLGHIQVWHVVLLSA
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSACAQAFDQPARHALVPHLVPRHNLHAAISFNSIAFNGAALFGPSLTGVLVPLIGFAGC
HHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEECCEEECCCHHCCCCHHHHHHHHHHHHHH
FYVNAVSFVAVFIALALMEFPPHAPGGGKTSMLEDLRAGLSFIGHNQVILALISMAAVTS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FFARPYQQFITVFARDVVHGDVDTAGLMQAAPALGTVIFMLAIASATNIQWKGKLLLGAG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEECCH
ILFPASLIAFSWSTNLYVSLALLVLVGGLNMTWQTTLNTLLQTNVGDEMRGRVMSAYTMT
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ALAMMPLGQGPMGMAFDYLGPSLALTLNALIALAWTVYMGLIRVKAIRTLP
HHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]