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The map label for this gene is ypvA [H]

Identifier: 51893878

GI number: 51893878

Start: 2944650

End: 2946620

Strand: Reverse

Name: ypvA [H]

Synonym: STH2740

Alternate gene names: 51893878

Gene position: 2946620-2944650 (Counterclockwise)

Preceding gene: 51893879

Following gene: 51893877

Centisome position: 82.63

GC content: 70.83

Gene sequence:

>1971_bases
TTGCAGATTCGCTGGACCAAGCTGCCGTTTACAGCGCACAACGAGTCCGAATACCGGCAGGGGCTGAACGACTGGCTGGG
GCGCGTCTTCTACGACGTGCTGCCCGAGCACGGCTTTGAGGTGCGGGAAGAGCAGATCTACACCGCCTTCCGCATTGCCC
GCGCGCTGACCGAAGGCTCCACCCTGCTGGCGGAGGCCGGACCCGGCACCGGCAAGACCTTCGCGTACCTCCTGCCCGCC
GTCTGCCACGCGCGGATGCGCGGCCGGCCGGTCGTGGTGGCCAGCGCCTCCAGCGTGCTGAAGGCGCAGCTCACTGGTCC
CGACGGCGACATCCAGACGCTGTCCCGGCTGCTGAACCTGGACATCGATGTGCGGGTGGCCGGCAATCCGGCCGATTATG
TGTGCGAGATGAAGGTGGAGGCCGGCGACTTCGGATCCGGCGAGGAACCCGAGGGCTGGTCCGAGCTCATCCACTGGGCC
AGGCGCACCGGCACCGGGGCCCGCTCCGAGGTTCCCGGAGTGCCCGACGATCTGTGGGAACTGGTGAGCTGGGATCCGTC
GCTGAACTGCGACACCTGCCCCCGCCGGGGCCACTGCCTGATGGTCGCCGCCCGCCGGCAGCACCGCGCGGCCGCGGACC
TGGTCGTCTGCGACCACCGGCTCTTCGCCCAGGACCTGCTTACCCGCAACGACCTGCTGGAAGGCGGGATGCTGCCGATT
CTGCCCAGCTACTCGGCGGTGATCTTCGACGAGGGCCACCACTTTCCCGAGACCTGGCAGCGGGCCCAAGGCTGGTCCCT
GAGCCAGCGCCGGCTGAGGCGGACCCTGGAGCGGCTGGAGTACTGGCACGCCCGGGAGCAGGTGGCGTGGCGGCTGGAGG
CGGCCCTTGTCGCCGCGGACAGTTTCATGCAGGCGCTGGATGTGCACACCAGGCCCGGTGAGGGCAAGCGGGATGTGGAT
CGCAGCGAGCTGCTCCTGAAGGCCGCCGCCCGGCTGGACCAGGCCCTCGACCTGCTGCAGACCGAACTGGTCACCGAGGA
GGCGATGAGCGAGGGGCAGTCCAGCGAGACCGAACTGCAGGCCTATCAGAATCGGATTGACGAACTGCGGGCCGCACTGC
GGCTGTTCCGCAGGCCCGAGTCGGTGGTCTGGCGGGAGGGGGACGAGCTGTGGGTCGTGCCCCGCCGGCCGAAGCCGCTC
TTCGGTGGCGACCTCCTGAAGCCCGGAACGCCGGTGGTCTTCTCCTCGGCCACCCTGGAGCCGGACTACCAGGCCCGGGT
GCTGGGGCTCAGCCGTTTCGACCAGAGCCGGGTGGGCGTGCCTTTCGACCTGGGCCGGCAGTCGCTGGTCTACCTGCCGC
CGGACGAAGGCTCCGGTATGAATGCCGCCGGCCCGGATGCTGCTGTCGACGCCGTGGTGGACGAGGCGGTGCGGGTGCTG
CATGCCACCGGTGGCCGGGCGCTCATCCTGGTGCGGTCGCTGGCGGAGGTGCGGCGCTGGCGGCAGGCGCTGGCGGCGCA
CCACCTTCCGTGGCCCGTGATCTACGAGGGAGACGGCGACCGGGGGGCGCAGCTGGAGCGGTTCCGGGCCGAGGTGGACT
CGGTGCTGGTCGGTGCCGGCTTCTGGGAGGGCGTCGACGTGCGCGGCGAGGCGCTGTCCTGCGTCATCCTTCCGTACCTG
CCCTTCCCCGAGCACGACCCGCTGATCCGTGAACGGCGTGGGCAGGCGCAGGCGGCCGGGCAGGACCCCTTCCGGGCCGT
CGACCTGCCCGAGATGCTGATCAAGCTGAAGCAGGGGATGGGCCGGCTCATCCGTACCGCCGAGGACCGGGGGGTCATCG
CCCTGCTGGACCGGTCCTACCGGGGCGCCGACTGGGCCGGGGCGGTGGAGGAGGCCTTCCCCGAGGGCGCACGGCGGGTC
ACCGATCTGGCGGAGGTGAAGGCGTTTCTCGCCGGCACCGGTCGAGGCTGA

Upstream 100 bases:

>100_bases
GGCGAAGGCCCCCGGGAGGGTGGCTTCGGGCGCCTCTTTCCAAGGGTTGTCCGGTCGGGTACTCTAGAAGCTACCAGAGC
ACCGCCAGGAGGGGTCCTGT

Downstream 100 bases:

>100_bases
GGCGCCAGGCGCCGGGGCAGGAGGTCGGCGGTGGAACTCGAATTCATCGTTGCGGTAGAGCGGTAAAGGAGGGGCTGTGG
TTGGAGAAACAGACCATGCG

Product: ATP-dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 656; Mature: 656

Protein sequence:

>656_residues
MQIRWTKLPFTAHNESEYRQGLNDWLGRVFYDVLPEHGFEVREEQIYTAFRIARALTEGSTLLAEAGPGTGKTFAYLLPA
VCHARMRGRPVVVASASSVLKAQLTGPDGDIQTLSRLLNLDIDVRVAGNPADYVCEMKVEAGDFGSGEEPEGWSELIHWA
RRTGTGARSEVPGVPDDLWELVSWDPSLNCDTCPRRGHCLMVAARRQHRAAADLVVCDHRLFAQDLLTRNDLLEGGMLPI
LPSYSAVIFDEGHHFPETWQRAQGWSLSQRRLRRTLERLEYWHAREQVAWRLEAALVAADSFMQALDVHTRPGEGKRDVD
RSELLLKAAARLDQALDLLQTELVTEEAMSEGQSSETELQAYQNRIDELRAALRLFRRPESVVWREGDELWVVPRRPKPL
FGGDLLKPGTPVVFSSATLEPDYQARVLGLSRFDQSRVGVPFDLGRQSLVYLPPDEGSGMNAAGPDAAVDAVVDEAVRVL
HATGGRALILVRSLAEVRRWRQALAAHHLPWPVIYEGDGDRGAQLERFRAEVDSVLVGAGFWEGVDVRGEALSCVILPYL
PFPEHDPLIRERRGQAQAAGQDPFRAVDLPEMLIKLKQGMGRLIRTAEDRGVIALLDRSYRGADWAGAVEEAFPEGARRV
TDLAEVKAFLAGTGRG

Sequences:

>Translated_656_residues
MQIRWTKLPFTAHNESEYRQGLNDWLGRVFYDVLPEHGFEVREEQIYTAFRIARALTEGSTLLAEAGPGTGKTFAYLLPA
VCHARMRGRPVVVASASSVLKAQLTGPDGDIQTLSRLLNLDIDVRVAGNPADYVCEMKVEAGDFGSGEEPEGWSELIHWA
RRTGTGARSEVPGVPDDLWELVSWDPSLNCDTCPRRGHCLMVAARRQHRAAADLVVCDHRLFAQDLLTRNDLLEGGMLPI
LPSYSAVIFDEGHHFPETWQRAQGWSLSQRRLRRTLERLEYWHAREQVAWRLEAALVAADSFMQALDVHTRPGEGKRDVD
RSELLLKAAARLDQALDLLQTELVTEEAMSEGQSSETELQAYQNRIDELRAALRLFRRPESVVWREGDELWVVPRRPKPL
FGGDLLKPGTPVVFSSATLEPDYQARVLGLSRFDQSRVGVPFDLGRQSLVYLPPDEGSGMNAAGPDAAVDAVVDEAVRVL
HATGGRALILVRSLAEVRRWRQALAAHHLPWPVIYEGDGDRGAQLERFRAEVDSVLVGAGFWEGVDVRGEALSCVILPYL
PFPEHDPLIRERRGQAQAAGQDPFRAVDLPEMLIKLKQGMGRLIRTAEDRGVIALLDRSYRGADWAGAVEEAFPEGARRV
TDLAEVKAFLAGTGRG
>Mature_656_residues
MQIRWTKLPFTAHNESEYRQGLNDWLGRVFYDVLPEHGFEVREEQIYTAFRIARALTEGSTLLAEAGPGTGKTFAYLLPA
VCHARMRGRPVVVASASSVLKAQLTGPDGDIQTLSRLLNLDIDVRVAGNPADYVCEMKVEAGDFGSGEEPEGWSELIHWA
RRTGTGARSEVPGVPDDLWELVSWDPSLNCDTCPRRGHCLMVAARRQHRAAADLVVCDHRLFAQDLLTRNDLLEGGMLPI
LPSYSAVIFDEGHHFPETWQRAQGWSLSQRRLRRTLERLEYWHAREQVAWRLEAALVAADSFMQALDVHTRPGEGKRDVD
RSELLLKAAARLDQALDLLQTELVTEEAMSEGQSSETELQAYQNRIDELRAALRLFRRPESVVWREGDELWVVPRRPKPL
FGGDLLKPGTPVVFSSATLEPDYQARVLGLSRFDQSRVGVPFDLGRQSLVYLPPDEGSGMNAAGPDAAVDAVVDEAVRVL
HATGGRALILVRSLAEVRRWRQALAAHHLPWPVIYEGDGDRGAQLERFRAEVDSVLVGAGFWEGVDVRGEALSCVILPYL
PFPEHDPLIRERRGQAQAAGQDPFRAVDLPEMLIKLKQGMGRLIRTAEDRGVIALLDRSYRGADWAGAVEEAFPEGARRV
TDLAEVKAFLAGTGRG

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=649, Percent_Identity=30.9707241910632, Blast_Score=209, Evalue=6e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: NA

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 73012; Mature: 73012

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIRWTKLPFTAHNESEYRQGLNDWLGRVFYDVLPEHGFEVREEQIYTAFRIARALTEGS
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
TLLAEAGPGTGKTFAYLLPAVCHARMRGRPVVVASASSVLKAQLTGPDGDIQTLSRLLNL
EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCC
DIDVRVAGNPADYVCEMKVEAGDFGSGEEPEGWSELIHWARRTGTGARSEVPGVPDDLWE
CEEEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
LVSWDPSLNCDTCPRRGHCLMVAARRQHRAAADLVVCDHRLFAQDLLTRNDLLEGGMLPI
HHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LPSYSAVIFDEGHHFPETWQRAQGWSLSQRRLRRTLERLEYWHAREQVAWRLEAALVAAD
CCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFMQALDVHTRPGEGKRDVDRSELLLKAAARLDQALDLLQTELVTEEAMSEGQSSETELQ
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AYQNRIDELRAALRLFRRPESVVWREGDELWVVPRRPKPLFGGDLLKPGTPVVFSSATLE
HHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCC
PDYQARVLGLSRFDQSRVGVPFDLGRQSLVYLPPDEGSGMNAAGPDAAVDAVVDEAVRVL
CCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
HATGGRALILVRSLAEVRRWRQALAAHHLPWPVIYEGDGDRGAQLERFRAEVDSVLVGAG
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHEEEECC
FWEGVDVRGEALSCVILPYLPFPEHDPLIRERRGQAQAAGQDPFRAVDLPEMLIKLKQGM
CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
GRLIRTAEDRGVIALLDRSYRGADWAGAVEEAFPEGARRVTDLAEVKAFLAGTGRG
HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIRWTKLPFTAHNESEYRQGLNDWLGRVFYDVLPEHGFEVREEQIYTAFRIARALTEGS
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
TLLAEAGPGTGKTFAYLLPAVCHARMRGRPVVVASASSVLKAQLTGPDGDIQTLSRLLNL
EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCC
DIDVRVAGNPADYVCEMKVEAGDFGSGEEPEGWSELIHWARRTGTGARSEVPGVPDDLWE
CEEEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
LVSWDPSLNCDTCPRRGHCLMVAARRQHRAAADLVVCDHRLFAQDLLTRNDLLEGGMLPI
HHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LPSYSAVIFDEGHHFPETWQRAQGWSLSQRRLRRTLERLEYWHAREQVAWRLEAALVAAD
CCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFMQALDVHTRPGEGKRDVDRSELLLKAAARLDQALDLLQTELVTEEAMSEGQSSETELQ
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AYQNRIDELRAALRLFRRPESVVWREGDELWVVPRRPKPLFGGDLLKPGTPVVFSSATLE
HHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCC
PDYQARVLGLSRFDQSRVGVPFDLGRQSLVYLPPDEGSGMNAAGPDAAVDAVVDEAVRVL
CCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
HATGGRALILVRSLAEVRRWRQALAAHHLPWPVIYEGDGDRGAQLERFRAEVDSVLVGAG
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHEEEECC
FWEGVDVRGEALSCVILPYLPFPEHDPLIRERRGQAQAAGQDPFRAVDLPEMLIKLKQGM
CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
GRLIRTAEDRGVIALLDRSYRGADWAGAVEEAFPEGARRVTDLAEVKAFLAGTGRG
HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]