Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893859

Identifier: 51893859

GI number: 51893859

Start: 2919129

End: 2919743

Strand: Reverse

Name: 51893859

Synonym: STH2721

Alternate gene names: NA

Gene position: 2919743-2919129 (Counterclockwise)

Preceding gene: 51893860

Following gene: 51893858

Centisome position: 81.87

GC content: 65.53

Gene sequence:

>615_bases
ATGTGTATCTTACTTCCCCTGGGTCAGAACGTCCAGACCTATCTTCGCAAATATGGCACTTGCGGGCCGGACCTGCCCCT
GCACTGCCCAGGTTGCGGTGGTCGAATGCGGCGGCATGGGCGGTACTGGCGCTGGGTCTTTACTGCGCACCAGAAGGCGT
ACATCCCGATCTACCGCTGGTGGTGTCCAGGGTGCCGTAAGACGTGCGCCATCTTGCCTGACTTTCTGAAACCGTACGCC
CGATTCATCACGCTGGTGCGAGAAGCCGTGGTTCGCGGGCGGGTGCGGCGGGGGCTGCCCTGGAGCACCCTGGCCCGGCG
ACTGAGCAGCCCGACGGTCAGCTGGCTCTCGGAGAAGACGCTCAGACGCTGGCTTGTCAGGGCGAGAGCGCTGGCCGGAG
AGTGGAGCCAGTACCTTGCCGAACGGGTTCTGCGCTTCTGGCCGGACACAGACCTCGATGCCCTCACCCCCCGGCGGGAA
GGTCCGGACGCCACGCTCCACTTCCTGCTGGATGTGGGGGACTGGTACCGCCGTCAGATGGGGCGGCGGCCGGAGGAACA
CGGCGGAGTGTTTGCTGCGCTGAACCGGCTGGGTGAAGGCACGGCTTCCCTCTAG

Upstream 100 bases:

>100_bases
GTTTTCGTACGACAGGGGACAAATATGAGAGCCTGCCCAGGCCTGTGACTTGGCGGTCCACCTGGGCAGGCTCTCCCCAC
AGGGCGGAGTGCACCTGTGT

Downstream 100 bases:

>100_bases
CACACCACAGAGTCTGTCCGTCGCCTTCCCGCAGGCTGGCGTGCCACAATGGCGCCAACTTGGCAAGGGAGGGACTCACC
ATGGACGAACAGCAGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRWWCPGCRKTCAILPDFLKPYA
RFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKTLRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRRE
GPDATLHFLLDVGDWYRRQMGRRPEEHGGVFAALNRLGEGTASL

Sequences:

>Translated_204_residues
MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRWWCPGCRKTCAILPDFLKPYA
RFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKTLRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRRE
GPDATLHFLLDVGDWYRRQMGRRPEEHGGVFAALNRLGEGTASL
>Mature_204_residues
MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRWWCPGCRKTCAILPDFLKPYA
RFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKTLRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRRE
GPDATLHFLLDVGDWYRRQMGRRPEEHGGVFAALNRLGEGTASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23737; Mature: 23737

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRW
CEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHH
WCPGCRKTCAILPDFLKPYARFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
LRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRREGPDATLHFLLDVGDWYRRQM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
GRRPEEHGGVFAALNRLGEGTASL
CCCCCHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRW
CEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHH
WCPGCRKTCAILPDFLKPYARFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
LRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRREGPDATLHFLLDVGDWYRRQM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
GRRPEEHGGVFAALNRLGEGTASL
CCCCCHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA