| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893859
Identifier: 51893859
GI number: 51893859
Start: 2919129
End: 2919743
Strand: Reverse
Name: 51893859
Synonym: STH2721
Alternate gene names: NA
Gene position: 2919743-2919129 (Counterclockwise)
Preceding gene: 51893860
Following gene: 51893858
Centisome position: 81.87
GC content: 65.53
Gene sequence:
>615_bases ATGTGTATCTTACTTCCCCTGGGTCAGAACGTCCAGACCTATCTTCGCAAATATGGCACTTGCGGGCCGGACCTGCCCCT GCACTGCCCAGGTTGCGGTGGTCGAATGCGGCGGCATGGGCGGTACTGGCGCTGGGTCTTTACTGCGCACCAGAAGGCGT ACATCCCGATCTACCGCTGGTGGTGTCCAGGGTGCCGTAAGACGTGCGCCATCTTGCCTGACTTTCTGAAACCGTACGCC CGATTCATCACGCTGGTGCGAGAAGCCGTGGTTCGCGGGCGGGTGCGGCGGGGGCTGCCCTGGAGCACCCTGGCCCGGCG ACTGAGCAGCCCGACGGTCAGCTGGCTCTCGGAGAAGACGCTCAGACGCTGGCTTGTCAGGGCGAGAGCGCTGGCCGGAG AGTGGAGCCAGTACCTTGCCGAACGGGTTCTGCGCTTCTGGCCGGACACAGACCTCGATGCCCTCACCCCCCGGCGGGAA GGTCCGGACGCCACGCTCCACTTCCTGCTGGATGTGGGGGACTGGTACCGCCGTCAGATGGGGCGGCGGCCGGAGGAACA CGGCGGAGTGTTTGCTGCGCTGAACCGGCTGGGTGAAGGCACGGCTTCCCTCTAG
Upstream 100 bases:
>100_bases GTTTTCGTACGACAGGGGACAAATATGAGAGCCTGCCCAGGCCTGTGACTTGGCGGTCCACCTGGGCAGGCTCTCCCCAC AGGGCGGAGTGCACCTGTGT
Downstream 100 bases:
>100_bases CACACCACAGAGTCTGTCCGTCGCCTTCCCGCAGGCTGGCGTGCCACAATGGCGCCAACTTGGCAAGGGAGGGACTCACC ATGGACGAACAGCAGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRWWCPGCRKTCAILPDFLKPYA RFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKTLRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRRE GPDATLHFLLDVGDWYRRQMGRRPEEHGGVFAALNRLGEGTASL
Sequences:
>Translated_204_residues MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRWWCPGCRKTCAILPDFLKPYA RFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKTLRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRRE GPDATLHFLLDVGDWYRRQMGRRPEEHGGVFAALNRLGEGTASL >Mature_204_residues MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRWWCPGCRKTCAILPDFLKPYA RFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKTLRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRRE GPDATLHFLLDVGDWYRRQMGRRPEEHGGVFAALNRLGEGTASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23737; Mature: 23737
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRW CEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHH WCPGCRKTCAILPDFLKPYARFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH LRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRREGPDATLHFLLDVGDWYRRQM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH GRRPEEHGGVFAALNRLGEGTASL CCCCCHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure MCILLPLGQNVQTYLRKYGTCGPDLPLHCPGCGGRMRRHGRYWRWVFTAHQKAYIPIYRW CEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHH WCPGCRKTCAILPDFLKPYARFITLVREAVVRGRVRRGLPWSTLARRLSSPTVSWLSEKT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH LRRWLVRARALAGEWSQYLAERVLRFWPDTDLDALTPRREGPDATLHFLLDVGDWYRRQM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH GRRPEEHGGVFAALNRLGEGTASL CCCCCHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA