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The map label for this gene is spoVB [H]

Identifier: 51893832

GI number: 51893832

Start: 2883476

End: 2885047

Strand: Reverse

Name: spoVB [H]

Synonym: STH2694

Alternate gene names: 51893832

Gene position: 2885047-2883476 (Counterclockwise)

Preceding gene: 51893835

Following gene: 51893830

Centisome position: 80.9

GC content: 73.92

Gene sequence:

>1572_bases
GTGCTGAAGGGCGCCGCCGCCCTCGCGCTGGCGGGGCTCATCATCAAGGTGGGCAACCTGCTGGTCCGGCTTCCCCTCAC
CCGCATGGTGGGCTCGGAGGGCCTGGGCATCTACCAGATGGCCCTGCCGGCCTACAACGCCCTGCTCCACCTGGCGGTGG
GCGGCGTGCCCGTCGCCGTGCAGAACCTGGTGGCCGAGTACAACGCCCGGGGGCGGCGGGACGTGATGCACCGGGTCCTG
CACCTGGCCCTGACCTACGCGCTCCTCGCCGGCGCCGCCGCCGCGTGTCTGCTGCTCATCGGGGCGCCGTTCCTGGCCCG
GGCCCTGGGCGACGCCCGGTCCTACTGGCCGCTGGTGGCCCTGGCCCCGGCGATCATCCTGAACGGCCTGGACTCCGTCT
TCCGGCACTACATGCAGGGCCAGAAGCAGATGACCCCCAGCGCCGTCGCCTCGGTGCTGGAGCAGGGTACCAAGATCGCC
GTCACCATGGGCGCGGCCGTCCTGCTGCTGCCGCTGGGGCTGGAGTACGCCGCGGCCGGGGCGGCGCTGGGCATCACGGT
GGGGGCCCTGGCCTCGGTGCTCTTCATGCTCTGGCGGGTCCGCCGGGAGCGGGAGGAGGACGAGGCGGGGGATGCCCCCC
GGGAGGAACGGCAGATGCCCCGGGGGCTCGGGGTGCGGATGCTGCGGCTGGCGTGGCCGGTCACCCTGGGGTCGGTGACC
ATGCCCCTGCTGAATGTGCTGGACGTCTCCATCGTGCAGCGGGGGTTCCTGAAGGCCGGCTACCCGCCTGCGCAGGCCAC
CGCGCTCTACGGCGCCTTCGCCGGCATCGCCGTCCAGGTGGTGTGGTTCCCCTTCGTGCTCACCAACGCGGTCGCCAACG
CGACGGTGCCGACGCTCACTGCCGCCCAGGCCCGGGGCGACATGGAGGCCGTGCGGCAGCGGGTGGTGATGGGGCTCCGG
ACGGCCAGCCTGATCTGCCTGCCGGTGGCCATCGGCGCGATGGTGCTCGCGGCCCCCATCGCCCTGCTCTTCGGCGAGCC
GCTGGCCGCCGACCCGCTGCGCCACCTGGGGCCGGTGGCGCTGCTCGGGCCGCTCACCTGGATGACCGTGGCGCAGCTGC
AGGCCCTGGGAGAGACCGGCGCGCCGATGCGCAACCTCACCCTGGCCATGGGGCTGAAGTTGGCCCTGGATGGCCTGCTC
GCACCCATCCGGGGCATCGACGTCAACGGGGTGGCCACGGCCTCGGTGGCGATGTTCTTCACCGCCCTGTGGTTCAACGC
CCGGGAGCTGGAGCGGCTGTTGCAGGAGCCGGTCCCCTGGGGCCGCATCCTGATGGGGCCGACGGTCGCCTCGCTGGTGA
TGGGCGCGGGCCTGGCGGGGCTGATCGCCGCCCTGTGGGGCACCGCGGGCCGGGTGGAGGCCCTGGCCGTGGCCGCGGTG
GTGGCGCCGCTGCTCTACGGCGGGACCCTGGTCGCCACCCGCAGCATCACCCGGACCGAGCTGCTCGCGATGGCGGGGCC
CCTCGCCCCGCGCCTGGAGCGGTGGCTGGCGATCCTCTGGCCCTGGAGCTAA

Upstream 100 bases:

>100_bases
GAACTCCTGCCGCGGCCTGCAGCTCCAAGTCCGGCATGTCCCCCGCGCCCCGCGCATACGTTGCTTCGGAGGGGGGACGA
GCATGAGCCGGAGAGAGTCG

Downstream 100 bases:

>100_bases
GACACAGGGACCACCTGGCGATCCCCAGGTGGTCCCTGTCTACATCGCTTCGGTGGCCGGCTTCTCGCCGGTCGGCTTGA
CCGCCTCCCCCTTGAGCTCG

Product: stage V sporulation protein B

Products: NA

Alternate protein names: Stage III sporulation protein F [H]

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MLKGAAALALAGLIIKVGNLLVRLPLTRMVGSEGLGIYQMALPAYNALLHLAVGGVPVAVQNLVAEYNARGRRDVMHRVL
HLALTYALLAGAAAACLLLIGAPFLARALGDARSYWPLVALAPAIILNGLDSVFRHYMQGQKQMTPSAVASVLEQGTKIA
VTMGAAVLLLPLGLEYAAAGAALGITVGALASVLFMLWRVRREREEDEAGDAPREERQMPRGLGVRMLRLAWPVTLGSVT
MPLLNVLDVSIVQRGFLKAGYPPAQATALYGAFAGIAVQVVWFPFVLTNAVANATVPTLTAAQARGDMEAVRQRVVMGLR
TASLICLPVAIGAMVLAAPIALLFGEPLAADPLRHLGPVALLGPLTWMTVAQLQALGETGAPMRNLTLAMGLKLALDGLL
APIRGIDVNGVATASVAMFFTALWFNARELERLLQEPVPWGRILMGPTVASLVMGAGLAGLIAALWGTAGRVEALAVAAV
VAPLLYGGTLVATRSITRTELLAMAGPLAPRLERWLAILWPWS

Sequences:

>Translated_523_residues
MLKGAAALALAGLIIKVGNLLVRLPLTRMVGSEGLGIYQMALPAYNALLHLAVGGVPVAVQNLVAEYNARGRRDVMHRVL
HLALTYALLAGAAAACLLLIGAPFLARALGDARSYWPLVALAPAIILNGLDSVFRHYMQGQKQMTPSAVASVLEQGTKIA
VTMGAAVLLLPLGLEYAAAGAALGITVGALASVLFMLWRVRREREEDEAGDAPREERQMPRGLGVRMLRLAWPVTLGSVT
MPLLNVLDVSIVQRGFLKAGYPPAQATALYGAFAGIAVQVVWFPFVLTNAVANATVPTLTAAQARGDMEAVRQRVVMGLR
TASLICLPVAIGAMVLAAPIALLFGEPLAADPLRHLGPVALLGPLTWMTVAQLQALGETGAPMRNLTLAMGLKLALDGLL
APIRGIDVNGVATASVAMFFTALWFNARELERLLQEPVPWGRILMGPTVASLVMGAGLAGLIAALWGTAGRVEALAVAAV
VAPLLYGGTLVATRSITRTELLAMAGPLAPRLERWLAILWPWS
>Mature_523_residues
MLKGAAALALAGLIIKVGNLLVRLPLTRMVGSEGLGIYQMALPAYNALLHLAVGGVPVAVQNLVAEYNARGRRDVMHRVL
HLALTYALLAGAAAACLLLIGAPFLARALGDARSYWPLVALAPAIILNGLDSVFRHYMQGQKQMTPSAVASVLEQGTKIA
VTMGAAVLLLPLGLEYAAAGAALGITVGALASVLFMLWRVRREREEDEAGDAPREERQMPRGLGVRMLRLAWPVTLGSVT
MPLLNVLDVSIVQRGFLKAGYPPAQATALYGAFAGIAVQVVWFPFVLTNAVANATVPTLTAAQARGDMEAVRQRVVMGLR
TASLICLPVAIGAMVLAAPIALLFGEPLAADPLRHLGPVALLGPLTWMTVAQLQALGETGAPMRNLTLAMGLKLALDGLL
APIRGIDVNGVATASVAMFFTALWFNARELERLLQEPVPWGRILMGPTVASLVMGAGLAGLIAALWGTAGRVEALAVAAV
VAPLLYGGTLVATRSITRTELLAMAGPLAPRLERWLAILWPWS

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 54996; Mature: 54996

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGAAALALAGLIIKVGNLLVRLPLTRMVGSEGLGIYQMALPAYNALLHLAVGGVPVAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
QNLVAEYNARGRRDVMHRVLHLALTYALLAGAAAACLLLIGAPFLARALGDARSYWPLVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPAIILNGLDSVFRHYMQGQKQMTPSAVASVLEQGTKIAVTMGAAVLLLPLGLEYAAAG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHCHHHHHCC
AALGITVGALASVLFMLWRVRREREEDEAGDAPREERQMPRGLGVRMLRLAWPVTLGSVT
HHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
MPLLNVLDVSIVQRGFLKAGYPPAQATALYGAFAGIAVQVVWFPFVLTNAVANATVPTLT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AAQARGDMEAVRQRVVMGLRTASLICLPVAIGAMVLAAPIALLFGEPLAADPLRHLGPVA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHH
LLGPLTWMTVAQLQALGETGAPMRNLTLAMGLKLALDGLLAPIRGIDVNGVATASVAMFF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TALWFNARELERLLQEPVPWGRILMGPTVASLVMGAGLAGLIAALWGTAGRVEALAVAAV
HHHHCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
VAPLLYGGTLVATRSITRTELLAMAGPLAPRLERWLAILWPWS
HHHHHHCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKGAAALALAGLIIKVGNLLVRLPLTRMVGSEGLGIYQMALPAYNALLHLAVGGVPVAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
QNLVAEYNARGRRDVMHRVLHLALTYALLAGAAAACLLLIGAPFLARALGDARSYWPLVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPAIILNGLDSVFRHYMQGQKQMTPSAVASVLEQGTKIAVTMGAAVLLLPLGLEYAAAG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHCHHHHHCC
AALGITVGALASVLFMLWRVRREREEDEAGDAPREERQMPRGLGVRMLRLAWPVTLGSVT
HHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
MPLLNVLDVSIVQRGFLKAGYPPAQATALYGAFAGIAVQVVWFPFVLTNAVANATVPTLT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AAQARGDMEAVRQRVVMGLRTASLICLPVAIGAMVLAAPIALLFGEPLAADPLRHLGPVA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHH
LLGPLTWMTVAQLQALGETGAPMRNLTLAMGLKLALDGLLAPIRGIDVNGVATASVAMFF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TALWFNARELERLLQEPVPWGRILMGPTVASLVMGAGLAGLIAALWGTAGRVEALAVAAV
HHHHCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
VAPLLYGGTLVATRSITRTELLAMAGPLAPRLERWLAILWPWS
HHHHHHCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377 [H]