| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is phoP [H]
Identifier: 51893829
GI number: 51893829
Start: 2881368
End: 2881736
Strand: Reverse
Name: phoP [H]
Synonym: STH2691
Alternate gene names: 51893829
Gene position: 2881736-2881368 (Counterclockwise)
Preceding gene: 51893830
Following gene: 51893828
Centisome position: 80.81
GC content: 65.85
Gene sequence:
>369_bases TTGGTTAAGAAAATCCTCATCGCTGACGCAGACCCTTCGCGACGCACCCTGCTCCGCGCCACCCTTCAGGATCCGCGCTA CGAGATCATCGAGGCTTCGGGCGGCGTACAGGCTCTCGCGCTTCGGGAGAGGCACCGGCCTGACCTGGTCATCCTCGACG AGGCGATGCCCGGTGTCAGCGGCATGGAGGTGTGCCGTGCGATCAAGCGCGACAGGGGAGCCGGCAACACCCCGGTGATC CTGCTGACGGAGCAGGAGACCTCCACGGCGATCGGTGAGGCCGGCCCCGACGTTTTCCTGCCGAAGCCATACAGCCCGCT GCGCCTGCTGGAAGCCGTCGAGAAACTGCTCTCGCAGGCGGAGGGCTAA
Upstream 100 bases:
>100_bases GGGTTCATTCAGACGGGAAACGGTCCCGGACTAGCAGGATTTCCACAGCGCGGGAGCGAACAGCAGAAATTGGCGTAACC CCCGCAAGGAGGAAAGCCGA
Downstream 100 bases:
>100_bases GCCGATGCATGACGACATCGCCGGGCTGACACGGGCCGAGCTGGAACGGGAGGTCCGCTACTGGCGCACCCAGAGCCTGC TCCTCGCCAGAGACTTTGGC
Product: two-component response regulator variant
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MVKKILIADADPSRRTLLRATLQDPRYEIIEASGGVQALALRERHRPDLVILDEAMPGVSGMEVCRAIKRDRGAGNTPVI LLTEQETSTAIGEAGPDVFLPKPYSPLRLLEAVEKLLSQAEG
Sequences:
>Translated_122_residues MVKKILIADADPSRRTLLRATLQDPRYEIIEASGGVQALALRERHRPDLVILDEAMPGVSGMEVCRAIKRDRGAGNTPVI LLTEQETSTAIGEAGPDVFLPKPYSPLRLLEAVEKLLSQAEG >Mature_122_residues MVKKILIADADPSRRTLLRATLQDPRYEIIEASGGVQALALRERHRPDLVILDEAMPGVSGMEVCRAIKRDRGAGNTPVI LLTEQETSTAIGEAGPDVFLPKPYSPLRLLEAVEKLLSQAEG
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13287; Mature: 13287
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKILIADADPSRRTLLRATLQDPRYEIIEASGGVQALALRERHRPDLVILDEAMPGVS CCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEHHHCCCCCEEEECCCCCCCC GMEVCRAIKRDRGAGNTPVILLTEQETSTAIGEAGPDVFLPKPYSPLRLLEAVEKLLSQA HHHHHHHHHHCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC EG CC >Mature Secondary Structure MVKKILIADADPSRRTLLRATLQDPRYEIIEASGGVQALALRERHRPDLVILDEAMPGVS CCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEHHHCCCCCEEEECCCCCCCC GMEVCRAIKRDRGAGNTPVILLTEQETSTAIGEAGPDVFLPKPYSPLRLLEAVEKLLSQA HHHHHHHHHHCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC EG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]