| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is yitG [H]
Identifier: 51893785
GI number: 51893785
Start: 2840133
End: 2841554
Strand: Reverse
Name: yitG [H]
Synonym: STH2647
Alternate gene names: 51893785
Gene position: 2841554-2840133 (Counterclockwise)
Preceding gene: 51893789
Following gene: 51893784
Centisome position: 79.68
GC content: 71.8
Gene sequence:
>1422_bases GTGTCGCAGGCCCGCCGTTCGGGGACGATAAACGTGATCGTCTCAGGGAGGGATGTGCCGGTGGACCAGTCAAACGCGCC GGCGGCGCAGGCCGTGACGAACCTCTGGCTGCAGCTGGCGGCGCTCTGCACCGTGCCGCTGATCATGGTCCTGGGCAACT CGATGCTGATCCCGGTGCTGCCCGACATGGGCCGGGTGATGGGGCTCAGCAAGGCGACCACCGGGCTGGCCGTCACGGCG TTCTCGCTCTCCGCGGGCATCGCCATCGCCGTCGCCGGCTTCCTGGCGGACCGATACGGCCGGAAGCTGGTGGTGGTGCC CAGCCTGCTGGTCTACGGCCTGGGGGGCATTGTCTCCGGCCTGGCGGGCTGGCGGATGGGGCCCAACGGGTTTGCGGTGG TCATGGCCGGGCGGGTCATCCAGGGCATTGGCGCAGCGGGAACGGCCCCGGTGGCCATGGCCTTCGTCGGCGACCTGTTC CGGGGCGGCAGCCGGGTGACGGCCCTGGGCATCTTCGAGGCCTCCAACGGGCTGGGCAAGGTGATTTCACCGATCCTCGG GGCCCTGATCGGCCAGGTCCTGGTCTGGTGGGCCGTCTTCTTCGCGTACGCCGTCCTGGCCGTTCCCTTCGCCCTGGCGG TCTGGTTCCTTACCCGGGAACCGCCGCGGCGCAAGGCGCCGCCCGCGCGGGAGTACTTCGGCCAGGTGCTGACCATCTTC CGCCGGAAGGGGGTGGCGCTGATCGCCTGCTTCTGGGCGGGCACCGTGGCGCTGTTCGTGCTCTTCGGCGTCCTCTTGTT CCTGTCGGAGCACCTGGAGACCGTTCACGGCATCGACGGCGTGCCCAAGGGCGTCCGCATCATGTGGCCGGTGCTGGCCA TGTCGGCCACGTCCTTCGCCGCGGGGCTCTTCCTGCAGCGGCGCGGGCAGCTCCTGAAGCCGGCGGTCGTCCTCGGCCTG GCCCTGGCCATCGCCGGCACCGTGCTCATCGCCTTCGTCCGGGCGGACTGGGCCTTCTACGCCGGCCTGGTCGTCGCCGG GATCGGTACGGGCCTGCAGCTGCCGGGCCTCAACAACCTGATCACCTCGTCGGCGCGGACGGAGCAGCGGGCGATGATCA CCTCGGTGTACGGCGCCGTGCGCTTCATCGGCGTGGCCTTCGGGCCGCCGCTGTACGGCGCCCTGATGCGCAACGGCGAG GCACTGCCTTTCTGGTTCTCCGCCGGCGTGCTGGCCACGTCGCTGGCGGCGACGCTCTTCCTCATCCGGCCTGAGCGGCT CGTGGAGGCGGAGGACGAGGCGGGGGCGGAGGCGCAGGGCCCGGACCGGAGGGAGGGGGGAGGCGGCCGGGGCGAGGTGG CCATCCCGGCCTGGGAACCGCCGGCGAACCTGCCCCTGGGGACCCGGGCGCCGCTGCACTGA
Upstream 100 bases:
>100_bases CCCCAGGGCCATCAGGCTGAGGAGGATGACCTGATCGCCGGGCATGGACATCCCTCCCGATGCGATTCTATCCACCGCGC GCGGCAAAAATGCCGGGCGG
Downstream 100 bases:
>100_bases CCGGCGGCTGTCCCAGGTTACAGGGAAGCGGGGGCCAGGGGGCGAATTCCTACGGAAAAGGCCAACCGTGGGGGGAGCCG CATGGACGTCGCCCTTGTGG
Product: membrane transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSQARRSGTINVIVSGRDVPVDQSNAPAAQAVTNLWLQLAALCTVPLIMVLGNSMLIPVLPDMGRVMGLSKATTGLAVTA FSLSAGIAIAVAGFLADRYGRKLVVVPSLLVYGLGGIVSGLAGWRMGPNGFAVVMAGRVIQGIGAAGTAPVAMAFVGDLF RGGSRVTALGIFEASNGLGKVISPILGALIGQVLVWWAVFFAYAVLAVPFALAVWFLTREPPRRKAPPAREYFGQVLTIF RRKGVALIACFWAGTVALFVLFGVLLFLSEHLETVHGIDGVPKGVRIMWPVLAMSATSFAAGLFLQRRGQLLKPAVVLGL ALAIAGTVLIAFVRADWAFYAGLVVAGIGTGLQLPGLNNLITSSARTEQRAMITSVYGAVRFIGVAFGPPLYGALMRNGE ALPFWFSAGVLATSLAATLFLIRPERLVEAEDEAGAEAQGPDRREGGGGRGEVAIPAWEPPANLPLGTRAPLH
Sequences:
>Translated_473_residues MSQARRSGTINVIVSGRDVPVDQSNAPAAQAVTNLWLQLAALCTVPLIMVLGNSMLIPVLPDMGRVMGLSKATTGLAVTA FSLSAGIAIAVAGFLADRYGRKLVVVPSLLVYGLGGIVSGLAGWRMGPNGFAVVMAGRVIQGIGAAGTAPVAMAFVGDLF RGGSRVTALGIFEASNGLGKVISPILGALIGQVLVWWAVFFAYAVLAVPFALAVWFLTREPPRRKAPPAREYFGQVLTIF RRKGVALIACFWAGTVALFVLFGVLLFLSEHLETVHGIDGVPKGVRIMWPVLAMSATSFAAGLFLQRRGQLLKPAVVLGL ALAIAGTVLIAFVRADWAFYAGLVVAGIGTGLQLPGLNNLITSSARTEQRAMITSVYGAVRFIGVAFGPPLYGALMRNGE ALPFWFSAGVLATSLAATLFLIRPERLVEAEDEAGAEAQGPDRREGGGGRGEVAIPAWEPPANLPLGTRAPLH >Mature_472_residues SQARRSGTINVIVSGRDVPVDQSNAPAAQAVTNLWLQLAALCTVPLIMVLGNSMLIPVLPDMGRVMGLSKATTGLAVTAF SLSAGIAIAVAGFLADRYGRKLVVVPSLLVYGLGGIVSGLAGWRMGPNGFAVVMAGRVIQGIGAAGTAPVAMAFVGDLFR GGSRVTALGIFEASNGLGKVISPILGALIGQVLVWWAVFFAYAVLAVPFALAVWFLTREPPRRKAPPAREYFGQVLTIFR RKGVALIACFWAGTVALFVLFGVLLFLSEHLETVHGIDGVPKGVRIMWPVLAMSATSFAAGLFLQRRGQLLKPAVVLGLA LAIAGTVLIAFVRADWAFYAGLVVAGIGTGLQLPGLNNLITSSARTEQRAMITSVYGAVRFIGVAFGPPLYGALMRNGEA LPFWFSAGVLATSLAATLFLIRPERLVEAEDEAGAEAQGPDRREGGGGRGEVAIPAWEPPANLPLGTRAPLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081738, Length=201, Percent_Identity=30.8457711442786, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790146, Length=192, Percent_Identity=26.5625, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49475; Mature: 49344
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQARRSGTINVIVSGRDVPVDQSNAPAAQAVTNLWLQLAALCTVPLIMVLGNSMLIPVL CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC PDMGRVMGLSKATTGLAVTAFSLSAGIAIAVAGFLADRYGRKLVVVPSLLVYGLGGIVSG CCHHHHHCCHHHHCCCEEEEHHHHCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH LAGWRMGPNGFAVVMAGRVIQGIGAAGTAPVAMAFVGDLFRGGSRVTALGIFEASNGLGK HHCCCCCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHH VISPILGALIGQVLVWWAVFFAYAVLAVPFALAVWFLTREPPRRKAPPAREYFGQVLTIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH RRKGVALIACFWAGTVALFVLFGVLLFLSEHLETVHGIDGVPKGVRIMWPVLAMSATSFA HHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH AGLFLQRRGQLLKPAVVLGLALAIAGTVLIAFVRADWAFYAGLVVAGIGTGLQLPGLNNL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH ITSSARTEQRAMITSVYGAVRFIGVAFGPPLYGALMRNGEALPFWFSAGVLATSLAATLF HHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LIRPERLVEAEDEAGAEAQGPDRREGGGGRGEVAIPAWEPPANLPLGTRAPLH HCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQARRSGTINVIVSGRDVPVDQSNAPAAQAVTNLWLQLAALCTVPLIMVLGNSMLIPVL CCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC PDMGRVMGLSKATTGLAVTAFSLSAGIAIAVAGFLADRYGRKLVVVPSLLVYGLGGIVSG CCHHHHHCCHHHHCCCEEEEHHHHCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH LAGWRMGPNGFAVVMAGRVIQGIGAAGTAPVAMAFVGDLFRGGSRVTALGIFEASNGLGK HHCCCCCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHH VISPILGALIGQVLVWWAVFFAYAVLAVPFALAVWFLTREPPRRKAPPAREYFGQVLTIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH RRKGVALIACFWAGTVALFVLFGVLLFLSEHLETVHGIDGVPKGVRIMWPVLAMSATSFA HHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH AGLFLQRRGQLLKPAVVLGLALAIAGTVLIAFVRADWAFYAGLVVAGIGTGLQLPGLNNL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH ITSSARTEQRAMITSVYGAVRFIGVAFGPPLYGALMRNGEALPFWFSAGVLATSLAATLF HHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LIRPERLVEAEDEAGAEAQGPDRREGGGGRGEVAIPAWEPPANLPLGTRAPLH HCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]