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The map label for this gene is opuCC [H]

Identifier: 51893765

GI number: 51893765

Start: 2820529

End: 2821443

Strand: Reverse

Name: opuCC [H]

Synonym: STH2627

Alternate gene names: 51893765

Gene position: 2821443-2820529 (Counterclockwise)

Preceding gene: 51893766

Following gene: 51893764

Centisome position: 79.12

GC content: 65.14

Gene sequence:

>915_bases
ATGTTTGGACACCGTAGGTTCTCGGCCGTCGCGGCCGCAGTGCTCTGCGTCCTGTTGGCCGGATGCGGCGGGGGCGCCGG
TTCCGGTGCGGGCGATGCCATCGTCGTCAGCTCCAAGGACTTTACGGAGAGCATCCTGCTGGGCGAGATCGCCGCCCAGC
TGATCGAGAGCAGGACCGACCTGACGGTGGTGCGGAAGCACAACCTGGGCGGCACGACGGTCAACTTCAACGGGCTGAAG
AACGGCGATATCACGCTCTACGCCGAGTATGACGGCACGGCTTACGGGCCCATTCTGGGCCATACCGAGCCGATCGCCGA
TCCCGACGGCCTGCACGACCTGGTCAAGAGGGAGTTTGAGGAGAAGTTCGGGATCACCTGGACGGCGCCGCTGGGCATGA
ACAACACCTACACCCTGGCGGTTCCCCGGGAGATCGCCGAGCAGCACAACCTGAAGACCTTCTCGGACCTGCTCGCGGTC
GACGACCAGCTGGTCTTCGGCACCACCAACGAGTTCATGGGCCGCCAGGTGGACGGGTACTACCCGCTGGTGGAGGCGTA
CGGCTTCGCGTTCAAGGACGTCAAGACGATGCAGACCGGCCTCCGCTGGAAGGCGATCGAGACCGGCGAGATCCAGGTGA
TCGACGCCTACGCCACCGACGGCAAGCTGGTGGAGTTCGACATGGTGATCCTGGAGGACGACCGCAACTTCTTCCCGCCC
TACAACGGCGCCTACGTGGTGCGCATGGACGCGGCGGAGCGGCACCCGGAGATCATCGAGCTGCTGAACCAGCTGGGCGG
CCTCCTGCCGGACGAGAAGATGCAGGAGCTCAACTACCGGGTGGAGTCGCTGGAGGAGCCGGTGGAGGAGGTCGCTCGGG
ACTTCCTGGTCGAGGCCGGACTCGTTGAGCGGTGA

Upstream 100 bases:

>100_bases
ACGCCGAGGGGGCTGCGACAGGCGTGAGCCCCGGCGGAGGGAAGGGACGGTGTGGGATGGGGGCGGCGTGAACCAGGGAA
TGAGGAGGTTTAGATAAGGT

Downstream 100 bases:

>100_bases
GGAACGCGCGGTGAGACGCTGACGAGGGGTACGGAACGGAACCAGGGCGCCTGGCTTCAGGGCCCTGGTTCCCGCTTGCC
TGGGCCGGGCTGAACTTCTA

Product: glycine betaine/carnitine/choline ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFGHRRFSAVAAAVLCVLLAGCGGGAGSGAGDAIVVSSKDFTESILLGEIAAQLIESRTDLTVVRKHNLGGTTVNFNGLK
NGDITLYAEYDGTAYGPILGHTEPIADPDGLHDLVKREFEEKFGITWTAPLGMNNTYTLAVPREIAEQHNLKTFSDLLAV
DDQLVFGTTNEFMGRQVDGYYPLVEAYGFAFKDVKTMQTGLRWKAIETGEIQVIDAYATDGKLVEFDMVILEDDRNFFPP
YNGAYVVRMDAAERHPEIIELLNQLGGLLPDEKMQELNYRVESLEEPVEEVARDFLVEAGLVER

Sequences:

>Translated_304_residues
MFGHRRFSAVAAAVLCVLLAGCGGGAGSGAGDAIVVSSKDFTESILLGEIAAQLIESRTDLTVVRKHNLGGTTVNFNGLK
NGDITLYAEYDGTAYGPILGHTEPIADPDGLHDLVKREFEEKFGITWTAPLGMNNTYTLAVPREIAEQHNLKTFSDLLAV
DDQLVFGTTNEFMGRQVDGYYPLVEAYGFAFKDVKTMQTGLRWKAIETGEIQVIDAYATDGKLVEFDMVILEDDRNFFPP
YNGAYVVRMDAAERHPEIIELLNQLGGLLPDEKMQELNYRVESLEEPVEEVARDFLVEAGLVER
>Mature_304_residues
MFGHRRFSAVAAAVLCVLLAGCGGGAGSGAGDAIVVSSKDFTESILLGEIAAQLIESRTDLTVVRKHNLGGTTVNFNGLK
NGDITLYAEYDGTAYGPILGHTEPIADPDGLHDLVKREFEEKFGITWTAPLGMNNTYTLAVPREIAEQHNLKTFSDLLAV
DDQLVFGTTNEFMGRQVDGYYPLVEAYGFAFKDVKTMQTGLRWKAIETGEIQVIDAYATDGKLVEFDMVILEDDRNFFPP
YNGAYVVRMDAAERHPEIIELLNQLGGLLPDEKMQELNYRVESLEEPVEEVARDFLVEAGLVER

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=287, Percent_Identity=27.1777003484321, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33477; Mature: 33477

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGHRRFSAVAAAVLCVLLAGCGGGAGSGAGDAIVVSSKDFTESILLGEIAAQLIESRTD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
LTVVRKHNLGGTTVNFNGLKNGDITLYAEYDGTAYGPILGHTEPIADPDGLHDLVKREFE
EEEEEECCCCCCEEEECCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
EKFGITWTAPLGMNNTYTLAVPREIAEQHNLKTFSDLLAVDDQLVFGTTNEFMGRQVDGY
HHHCCEEEECCCCCCEEEEEECHHHHHHCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCC
YPLVEAYGFAFKDVKTMQTGLRWKAIETGEIQVIDAYATDGKLVEFDMVILEDDRNFFPP
CHHHHHHCCHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCEEEEEEEEEEECCCCCCCC
YNGAYVVRMDAAERHPEIIELLNQLGGLLPDEKMQELNYRVESLEEPVEEVARDFLVEAG
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVER
CCCC
>Mature Secondary Structure
MFGHRRFSAVAAAVLCVLLAGCGGGAGSGAGDAIVVSSKDFTESILLGEIAAQLIESRTD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
LTVVRKHNLGGTTVNFNGLKNGDITLYAEYDGTAYGPILGHTEPIADPDGLHDLVKREFE
EEEEEECCCCCCEEEECCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
EKFGITWTAPLGMNNTYTLAVPREIAEQHNLKTFSDLLAVDDQLVFGTTNEFMGRQVDGY
HHHCCEEEECCCCCCEEEEEECHHHHHHCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCC
YPLVEAYGFAFKDVKTMQTGLRWKAIETGEIQVIDAYATDGKLVEFDMVILEDDRNFFPP
CHHHHHHCCHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCEEEEEEEEEEECCCCCCCC
YNGAYVVRMDAAERHPEIIELLNQLGGLLPDEKMQELNYRVESLEEPVEEVARDFLVEAG
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVER
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]