Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is arcA
Identifier: 51599094
GI number: 51599094
Start: 901481
End: 902710
Strand: Direct
Name: arcA
Synonym: BG0868
Alternate gene names: 51599094
Gene position: 901481-902710 (Clockwise)
Preceding gene: 51599090
Following gene: 51599095
Centisome position: 99.69
GC content: 29.67
Gene sequence:
>1230_bases ATGGAAGGATATTTAAATCCAATAAATATATTTTCTGAAATAGGTCGTTTGAAAAAAGTTTTGCTTCATAGACCAGGAGA AGAATTAGAAAATTTGACACCTTTTATTATGAAAAAATTTTTATTTGATGACATTCCTTACCTTGAAGTCGCAAGACAAG AGCATGAAGTTTTTGCAAGTACTTTAAAAAATAATTCAGTTGAAATTGAGTATGTTGAGGATCTTGTTAGCGAGGTTCTT GCTTCTTCTGTAGCGCTTAAAGATAAATTCATATCTCAATTTATTCTGGAGGCAGAAATAAAAACAGATAGTACAATTAA TATTTTAAAAGATTATTTTTCTAATTTGACTATTGATAATATGGTCTCTAAAATGATTTCGGGTATTGTAAGTAAAGAGC TTAAAAATTATGTATCTTCTCTTGATGATTTAGTTAACAGTGCAAGTCTTTTTATTATTGATCCTATGCCTAATGTTTTA TTTACCAGAGATCCTTTTGCTAGCATTGGTAATGGGATTACAATAAATAAAATGTCTAATAAGGTTAGACATAGAGAGAC AATATTTGCAGAGTATATTTTTAAATACCATCCTATTTATAAAAAAAATGTTCCAATTTGGTTTAATAGATGGGAAGAAT CTTCTTTGGAAGGTGGAGATGAGTTTGTGTTAAGCAAAGATATTTTAGTTATTGGAATTTCCGAAAGAACAGAAGCAGAG TCTGTAGAAAAATTGGCTATTAGCCTTTTTAAAAATAAGACTTCATTTAACACAATTTTGGCTTTTAAAATTCCAAAAAA TAGGGCTTATATGCATTTAGATACAGTTTTTACTCAAATTGATTATAGTGTTTTTACAAGCTTTACGAGTGATGATATGT ATTTCTCAATTTATGCTTTAACTTATAATTCAAGTTCTAGTAAAATTCATGTTAAAGAAGAAAAAGCTAGACTTAGAGAT GTTTTAAGCTTTTATCTTGGCAGGAAGATTGACATAATAAAATGTGCAGGTGGAGACTTAATACATGGTGCAAGAGAACA ATGGAATGATGGTGCCAATATTTTGGCTATAGCTCCGGGAGAAGTAATTGCTTATTCTAGAAATCATGTAACTAATAAGT TGTTTGAAGAAAATGGCATTAAAGTTTATAGAATTCCGTCTAGCGAGCTTTCAAGAGGTCGTGGTGGTCCAAGATGTATG TCTATGCCTTTAGTAAGAGAGGATATTTAA
Upstream 100 bases:
>100_bases CATTTATAATAATTTTTTAAAAACTTTAATAAATAATTGATATTTTTTAATATAAACTATAATATTTTAATATATGGCAA TTTTTATAAAGGGGAAATCG
Downstream 100 bases:
>100_bases TATTTGAGCTAAATAAGCTAAATAAGCTAAATAAAGGCTTTATAAACCAATTGTAAATGTTAGGGGTTATTATGTATAAT TTACGAAATAGGAGCTTTTT
Product: arginine deiminase
Products: NA
Alternate protein names: ADI; Arginine dihydrolase; AD
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MEGYLNPINIFSEIGRLKKVLLHRPGEELENLTPFIMKKFLFDDIPYLEVARQEHEVFASTLKNNSVEIEYVEDLVSEVL ASSVALKDKFISQFILEAEIKTDSTINILKDYFSNLTIDNMVSKMISGIVSKELKNYVSSLDDLVNSASLFIIDPMPNVL FTRDPFASIGNGITINKMSNKVRHRETIFAEYIFKYHPIYKKNVPIWFNRWEESSLEGGDEFVLSKDILVIGISERTEAE SVEKLAISLFKNKTSFNTILAFKIPKNRAYMHLDTVFTQIDYSVFTSFTSDDMYFSIYALTYNSSSSKIHVKEEKARLRD VLSFYLGRKIDIIKCAGGDLIHGAREQWNDGANILAIAPGEVIAYSRNHVTNKLFEENGIKVYRIPSSELSRGRGGPRCM SMPLVREDI
Sequences:
>Translated_409_residues MEGYLNPINIFSEIGRLKKVLLHRPGEELENLTPFIMKKFLFDDIPYLEVARQEHEVFASTLKNNSVEIEYVEDLVSEVL ASSVALKDKFISQFILEAEIKTDSTINILKDYFSNLTIDNMVSKMISGIVSKELKNYVSSLDDLVNSASLFIIDPMPNVL FTRDPFASIGNGITINKMSNKVRHRETIFAEYIFKYHPIYKKNVPIWFNRWEESSLEGGDEFVLSKDILVIGISERTEAE SVEKLAISLFKNKTSFNTILAFKIPKNRAYMHLDTVFTQIDYSVFTSFTSDDMYFSIYALTYNSSSSKIHVKEEKARLRD VLSFYLGRKIDIIKCAGGDLIHGAREQWNDGANILAIAPGEVIAYSRNHVTNKLFEENGIKVYRIPSSELSRGRGGPRCM SMPLVREDI >Mature_409_residues MEGYLNPINIFSEIGRLKKVLLHRPGEELENLTPFIMKKFLFDDIPYLEVARQEHEVFASTLKNNSVEIEYVEDLVSEVL ASSVALKDKFISQFILEAEIKTDSTINILKDYFSNLTIDNMVSKMISGIVSKELKNYVSSLDDLVNSASLFIIDPMPNVL FTRDPFASIGNGITINKMSNKVRHRETIFAEYIFKYHPIYKKNVPIWFNRWEESSLEGGDEFVLSKDILVIGISERTEAE SVEKLAISLFKNKTSFNTILAFKIPKNRAYMHLDTVFTQIDYSVFTSFTSDDMYFSIYALTYNSSSSKIHVKEEKARLRD VLSFYLGRKIDIIKCAGGDLIHGAREQWNDGANILAIAPGEVIAYSRNHVTNKLFEENGIKVYRIPSSELSRGRGGPRCM SMPLVREDI
Specific function: Unknown
COG id: COG2235
COG function: function code E; Arginine deiminase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine deiminase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARCA_BORGA (Q65ZT1)
Other databases:
- EMBL: CP000013 - RefSeq: YP_073282.1 - ProteinModelPortal: Q65ZT1 - SMR: Q65ZT1 - EnsemblBacteria: EBBORT00000007766 - GeneID: 2957797 - GenomeReviews: CP000013_GR - KEGG: bga:BG0868 - GeneTree: EBGT00050000007000 - HOGENOM: HBG298398 - OMA: RNEITNT - PhylomeDB: Q65ZT1 - ProtClustDB: PRK01388 - BioCyc: BGAR290434:BG0868-MONOMER - BRENDA: 3.5.3.6 - GO: GO:0005737 - HAMAP: MF_00242 - InterPro: IPR003198 - InterPro: IPR003876 - PIRSF: PIRSF006356 - PRINTS: PR01466 - TIGRFAMs: TIGR01078
Pfam domain/function: PF02274 Amidinotransf
EC number: =3.5.3.6
Molecular weight: Translated: 46690; Mature: 46690
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: ACT_SITE 399-399
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGYLNPINIFSEIGRLKKVLLHRPGEELENLTPFIMKKFLFDDIPYLEVARQEHEVFAS CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH TLKNNSVEIEYVEDLVSEVLASSVALKDKFISQFILEAEIKTDSTINILKDYFSNLTIDN HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH MVSKMISGIVSKELKNYVSSLDDLVNSASLFIIDPMPNVLFTRDPFASIGNGITINKMSN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCHHHHCCCEEEEHHHH KVRHRETIFAEYIFKYHPIYKKNVPIWFNRWEESSLEGGDEFVLSKDILVIGISERTEAE HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEECCEEEEEECCCCHHH SVEKLAISLFKNKTSFNTILAFKIPKNRAYMHLDTVFTQIDYSVFTSFTSDDMYFSIYAL HHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEE TYNSSSSKIHVKEEKARLRDVLSFYLGRKIDIIKCAGGDLIHGAREQWNDGANILAIAPG EECCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCHHHCCCCCCEEEECCC EVIAYSRNHVTNKLFEENGIKVYRIPSSELSRGRGGPRCMSMPLVREDI CEEEECCHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCEECCCCHHHCC >Mature Secondary Structure MEGYLNPINIFSEIGRLKKVLLHRPGEELENLTPFIMKKFLFDDIPYLEVARQEHEVFAS CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH TLKNNSVEIEYVEDLVSEVLASSVALKDKFISQFILEAEIKTDSTINILKDYFSNLTIDN HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH MVSKMISGIVSKELKNYVSSLDDLVNSASLFIIDPMPNVLFTRDPFASIGNGITINKMSN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCHHHHCCCEEEEHHHH KVRHRETIFAEYIFKYHPIYKKNVPIWFNRWEESSLEGGDEFVLSKDILVIGISERTEAE HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEECCEEEEEECCCCHHH SVEKLAISLFKNKTSFNTILAFKIPKNRAYMHLDTVFTQIDYSVFTSFTSDDMYFSIYAL HHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEE TYNSSSSKIHVKEEKARLRDVLSFYLGRKIDIIKCAGGDLIHGAREQWNDGANILAIAPG EECCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCHHHCCCCCCEEEECCC EVIAYSRNHVTNKLFEENGIKVYRIPSSELSRGRGGPRCMSMPLVREDI CEEEECCHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA