Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is ylxH-3 [H]
Identifier: 51598978
GI number: 51598978
Start: 766271
End: 767242
Strand: Direct
Name: ylxH-3 [H]
Synonym: BG0748
Alternate gene names: 51598978
Gene position: 766271-767242 (Clockwise)
Preceding gene: 51598977
Following gene: 51598979
Centisome position: 84.74
GC content: 29.94
Gene sequence:
>972_bases ATGACTAAAATTATTCCTGTAGCAAGTGGCAAAGGTGGTGTGGGAAAAACATCTTTTGTTGCAAATGTTGGCTATAAGCT TTCTAGTTTAGGTAAAACTGTAATACTTGTTGACCTTGATCTTGGAGGTTCTAATCTACATACGTGTTTAGGTGTCAAAA ATAAGGGCGTGGGTATTGGTTCTTTTATTAATAAAAAGGATAAAAGTTTTTCGGATTTGGTATGCAAAACATCTTATGAC AAACTTTACCTTATTCCAGGTGATGCTCTTTATACAGGAACGGCTAATCTTCCTTTTTCTGCTAAGAAAAAGATTATAGA ATCCATTCAAAAAGATCTTATTGCTGATTTTATTTTTTTGGATTTAGGATCTGGAACTTCTTATAATACAATAGATTTTT ATTTAGCATCTTATAGTGGTGTAATTATTACAGTACCAGAAACCCCTTCTATACTTAATGCTTATTCTTTTTTAAAGAAT GCTCTTTATCGTCTTTTATATTTAAGCTTTCCACAGAAAAGTCCTGAGCGCGATTATATTGGTAATTTTTTTAAAGATAA GATTGAAGGGACAAGGCTTGGATTTAAAGATTTGGTTGTTGGGATTGAACTTATTTCTTTGAGTTCTTCTTTGAAAGTTA AGAAGATGATGAATAATTTTTATCCTAGAGTAGTGCTGAATAGAATAGAAACTAGTGAAGAGATCGCTATGTGTGAAAAT TTGATTAATGTTGTTAAGAATAATATTAATATACCAATAGAGTTTATAGGCTTTGTACCTTTTGCAAAAAGTTTTAGAGA GGCTATTAATAATAGAGTGCCATTTATTGATTTTGAGAAGAATTCAAAGCTGAATAAATATTTTGAATTCATAGCTAGGA ATTTAATTAAATCTCCTGTTGAAGGGTCTCCTTATATTTACGACGACATATACGATATGATTAAAGATCAAAGTCAATTT ATTAGAAAATAA
Upstream 100 bases:
>100_bases AAATTTAAATAAAGATGCTGAAAAGAAATCGAGATTTTTAGGGATTTTTAATTTTATGAAAATTTTTCAAAAAGATCGTA AGGATAATTAGGATTCAAGA
Downstream 100 bases:
>100_bases TTGGGTTATAATTCTATAAAGGAGTATTTAGTGTATAGAATTAAAAATGAAAATTTAGATTTTAAAATAGATAGTTTAGG GGAATGCAAGCAAAACAATC
Product: minD-related ATP-binding protein
Products: NA
Alternate protein names: Cell division inhibitor minD [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTKIIPVASGKGGVGKTSFVANVGYKLSSLGKTVILVDLDLGGSNLHTCLGVKNKGVGIGSFINKKDKSFSDLVCKTSYD KLYLIPGDALYTGTANLPFSAKKKIIESIQKDLIADFIFLDLGSGTSYNTIDFYLASYSGVIITVPETPSILNAYSFLKN ALYRLLYLSFPQKSPERDYIGNFFKDKIEGTRLGFKDLVVGIELISLSSSLKVKKMMNNFYPRVVLNRIETSEEIAMCEN LINVVKNNINIPIEFIGFVPFAKSFREAINNRVPFIDFEKNSKLNKYFEFIARNLIKSPVEGSPYIYDDIYDMIKDQSQF IRK
Sequences:
>Translated_323_residues MTKIIPVASGKGGVGKTSFVANVGYKLSSLGKTVILVDLDLGGSNLHTCLGVKNKGVGIGSFINKKDKSFSDLVCKTSYD KLYLIPGDALYTGTANLPFSAKKKIIESIQKDLIADFIFLDLGSGTSYNTIDFYLASYSGVIITVPETPSILNAYSFLKN ALYRLLYLSFPQKSPERDYIGNFFKDKIEGTRLGFKDLVVGIELISLSSSLKVKKMMNNFYPRVVLNRIETSEEIAMCEN LINVVKNNINIPIEFIGFVPFAKSFREAINNRVPFIDFEKNSKLNKYFEFIARNLIKSPVEGSPYIYDDIYDMIKDQSQF IRK >Mature_322_residues TKIIPVASGKGGVGKTSFVANVGYKLSSLGKTVILVDLDLGGSNLHTCLGVKNKGVGIGSFINKKDKSFSDLVCKTSYDK LYLIPGDALYTGTANLPFSAKKKIIESIQKDLIADFIFLDLGSGTSYNTIDFYLASYSGVIITVPETPSILNAYSFLKNA LYRLLYLSFPQKSPERDYIGNFFKDKIEGTRLGFKDLVVGIELISLSSSLKVKKMMNNFYPRVVLNRIETSEEIAMCENL INVVKNNINIPIEFIGFVPFAKSFREAINNRVPFIDFEKNSKLNKYFEFIARNLIKSPVEGSPYIYDDIYDMIKDQSQFI RK
Specific function: ATPase required for the correct placement of the division site. Cell division inhibitors minC and minD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to desta
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family. MinD subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010223 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 36154; Mature: 36023
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIIPVASGKGGVGKTSFVANVGYKLSSLGKTVILVDLDLGGSNLHTCLGVKNKGVGIG CCEEEEECCCCCCCCCHHHHHHCCCHHHCCCCEEEEEEEECCCCCCHHEECCCCCCCCCH SFINKKDKSFSDLVCKTSYDKLYLIPGDALYTGTANLPFSAKKKIIESIQKDLIADFIFL HHHCCCCCCHHHHHEECCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEE DLGSGTSYNTIDFYLASYSGVIITVPETPSILNAYSFLKNALYRLLYLSFPQKSPERDYI ECCCCCCCCHHEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH GNFFKDKIEGTRLGFKDLVVGIELISLSSSLKVKKMMNNFYPRVVLNRIETSEEIAMCEN HHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHH LINVVKNNINIPIEFIGFVPFAKSFREAINNRVPFIDFEKNSKLNKYFEFIARNLIKSPV HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCC EGSPYIYDDIYDMIKDQSQFIRK CCCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKIIPVASGKGGVGKTSFVANVGYKLSSLGKTVILVDLDLGGSNLHTCLGVKNKGVGIG CEEEEECCCCCCCCCHHHHHHCCCHHHCCCCEEEEEEEECCCCCCHHEECCCCCCCCCH SFINKKDKSFSDLVCKTSYDKLYLIPGDALYTGTANLPFSAKKKIIESIQKDLIADFIFL HHHCCCCCCHHHHHEECCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEE DLGSGTSYNTIDFYLASYSGVIITVPETPSILNAYSFLKNALYRLLYLSFPQKSPERDYI ECCCCCCCCHHEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH GNFFKDKIEGTRLGFKDLVVGIELISLSSSLKVKKMMNNFYPRVVLNRIETSEEIAMCEN HHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHH LINVVKNNINIPIEFIGFVPFAKSFREAINNRVPFIDFEKNSKLNKYFEFIARNLIKSPV HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCC EGSPYIYDDIYDMIKDQSQFIRK CCCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]