Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is ktrC [H]
Identifier: 51598977
GI number: 51598977
Start: 765470
End: 766261
Strand: Direct
Name: ktrC [H]
Synonym: BG0747
Alternate gene names: 51598977
Gene position: 765470-766261 (Clockwise)
Preceding gene: 51598976
Following gene: 51598978
Centisome position: 84.65
GC content: 27.53
Gene sequence:
>792_bases TTGAAGCATATGAAAACATTTGTTATTATTGGACTGAGTAATTTAGGAATTCACTTGCTTGAAGATTTAAGCAGACTTGA TTGTCAAATTATTATTATAGATACATCTAAAGAGCTTATTGAAGAATATGATGTGATATCTACAGAAAGCTTTGTTGTCG AACAATTCACTAAAAATGCTTTAAAAAGAATAATTCCTGTAGATACAGACGCTGTTGTGATTGACTTTGATGATGATCTT GGTAAAAGTGCTCTTGTAACTCACTATTGTAATCTTTTGGGTTTGAAGGAAATATGTGTTAAGACAGAAAATAGGGATGA TGCTGAAATATTAAAAACTCTTGGCGCAACAAAAATTATATTTCCAAGTAAAGATGCTGCAAGAAGATTAACTCCATTAT TAGTATCTCCTAATCTTTCAACTTATAATATTATTGGGTATGATATTATTGTTGCTGAAACTGTTATTCCTAGGGAATAT GTTGGAAAAACTCTTTTTGAAGCTGATCTTAGAAGAGAATGTGGAATTACAGTTATTGCTGTTAGAAATTTAAGTAATTC TAGATATGAATTTGTTGATGGCGATTATTTTTTTTTAAAAGATGATAAAATTGTAATTTGTGGGAAACCAGATAGTATTG AAAATTTTACAAACAATAAAGATTTAATTAAAGATTTAATTTCGGTTTCTAAAGAGGATGAAAATTTAAATAAAGATGCT GAAAAGAAATCGAGATTTTTAGGGATTTTTAATTTTATGAAAATTTTTCAAAAAGATCGTAAGGATAATTAG
Upstream 100 bases:
>100_bases TGTTTTCAGGACGAATAGGACTTTTTTCAATGGCTGTTTTTGTTTCAAGAAAGTCGCGTTTTGAAGAATTTACAAGGCCA AGGCAAGATATTTTGGTTGG
Downstream 100 bases:
>100_bases GATTCAAGAATGACTAAAATTATTCCTGTAGCAAGTGGCAAAGGTGGTGTGGGAAAAACATCTTTTGTTGCAAATGTTGG CTATAAGCTTTCTAGTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: K(+)-uptake protein ktrC; ORF4 [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKHMKTFVIIGLSNLGIHLLEDLSRLDCQIIIIDTSKELIEEYDVISTESFVVEQFTKNALKRIIPVDTDAVVIDFDDDL GKSALVTHYCNLLGLKEICVKTENRDDAEILKTLGATKIIFPSKDAARRLTPLLVSPNLSTYNIIGYDIIVAETVIPREY VGKTLFEADLRRECGITVIAVRNLSNSRYEFVDGDYFFLKDDKIVICGKPDSIENFTNNKDLIKDLISVSKEDENLNKDA EKKSRFLGIFNFMKIFQKDRKDN
Sequences:
>Translated_263_residues MKHMKTFVIIGLSNLGIHLLEDLSRLDCQIIIIDTSKELIEEYDVISTESFVVEQFTKNALKRIIPVDTDAVVIDFDDDL GKSALVTHYCNLLGLKEICVKTENRDDAEILKTLGATKIIFPSKDAARRLTPLLVSPNLSTYNIIGYDIIVAETVIPREY VGKTLFEADLRRECGITVIAVRNLSNSRYEFVDGDYFFLKDDKIVICGKPDSIENFTNNKDLIKDLISVSKEDENLNKDA EKKSRFLGIFNFMKIFQKDRKDN >Mature_263_residues MKHMKTFVIIGLSNLGIHLLEDLSRLDCQIIIIDTSKELIEEYDVISTESFVVEQFTKNALKRIIPVDTDAVVIDFDDDL GKSALVTHYCNLLGLKEICVKTENRDDAEILKTLGATKIIFPSKDAARRLTPLLVSPNLSTYNIIGYDIIVAETVIPREY VGKTLFEADLRRECGITVIAVRNLSNSRYEFVDGDYFFLKDDKIVICGKPDSIENFTNNKDLIKDLISVSKEDENLNKDA EKKSRFLGIFNFMKIFQKDRKDN
Specific function: Catalytic subunit of the KtrCD potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0569
COG function: function code P; K+ transport systems, NAD-binding component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 29954; Mature: 29954
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHMKTFVIIGLSNLGIHLLEDLSRLDCQIIIIDTSKELIEEYDVISTESFVVEQFTKNA CCCCEEEEEEEECCCCHHHHHHHHHCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHH LKRIIPVDTDAVVIDFDDDLGKSALVTHYCNLLGLKEICVKTENRDDAEILKTLGATKII HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHCCCCEEE FPSKDAARRLTPLLVSPNLSTYNIIGYDIIVAETVIPREYVGKTLFEADLRRECGITVIA ECCCHHHHHCCCEEECCCCCEEEEEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCEEEEE VRNLSNSRYEFVDGDYFFLKDDKIVICGKPDSIENFTNNKDLIKDLISVSKEDENLNKDA EECCCCCCEEEECCCEEEEECCEEEEECCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCH EKKSRFLGIFNFMKIFQKDRKDN HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKHMKTFVIIGLSNLGIHLLEDLSRLDCQIIIIDTSKELIEEYDVISTESFVVEQFTKNA CCCCEEEEEEEECCCCHHHHHHHHHCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHH LKRIIPVDTDAVVIDFDDDLGKSALVTHYCNLLGLKEICVKTENRDDAEILKTLGATKII HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHCCCCEEE FPSKDAARRLTPLLVSPNLSTYNIIGYDIIVAETVIPREYVGKTLFEADLRRECGITVIA ECCCHHHHHCCCEEECCCCCEEEEEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCEEEEE VRNLSNSRYEFVDGDYFFLKDDKIVICGKPDSIENFTNNKDLIKDLISVSKEDENLNKDA EECCCCCCEEEECCCEEEEECCEEEEECCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCH EKKSRFLGIFNFMKIFQKDRKDN HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969500; 9384377 [H]