Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is yrrL [H]

Identifier: 51598962

GI number: 51598962

Start: 747199

End: 748230

Strand: Direct

Name: yrrL [H]

Synonym: BG0732

Alternate gene names: 51598962

Gene position: 747199-748230 (Clockwise)

Preceding gene: 51598961

Following gene: 51598963

Centisome position: 82.63

GC content: 27.81

Gene sequence:

>1032_bases
GTGCTTATTAAAATTGGGAAAGTATTTATTCTTTTGTTCTTTTTAGGATCTGTTTTTTTAATTTTTATATATTTTTTAAA
TCTATCTTCTTTAGCAAATGGTTTAGTTTATGAATTTGATGTTGAGAAAGGTTGGGGAGTTAAAAAAATAGCTAAAGAAT
TAAAAAAACAAAAATTAATTAAATCCGAATTGCTTCTTGTTTTTATTTCGTATATTTTTGGTAGTGACAAACAATTTAAA
GAGGGAAGATATTTAATCAATAGTGATCTTTCTACATTTGAGATGTATAAAGAGTTTTTAAGGGGATCTTCTAATGTAAA
TATTGATGTTACAATACCCGAAGGGTATACTAGCAGAAGAATTGCTTCTAAGCTTAAAGAATTTGCTGTTATTGATGATG
TTCAAGATTTTCTTTTTTTGATCAACGAAAAATCATTTATTTACGAGCTTGGGTTCGATTATGATTCTCTTGAGGGATTT
TTATTCCCAGATACCTATAAATTTTATAAGGGTATGGAAATAAAGAATATTGTTCGCATGTTTGTTGACAATTTTTTTAA
TAAGCTTAAATCTATAGGTGTTGTTTTTAGTGATTATTCAAATAAAGATCTTTACCATAGAGTAATAATAGCATCTATTG
TTGAGCGTGAGTATAGAGTTAAAAGTGAAGCTTCAACTATGTCTTCGGTTTTTTATAACAGAATAAAATCCGGTATGGCA
TTACAATCTTGTGCTACTATTGAATATATTATTACAGAGGAGCTAGGACGAAGCCATCCCAAAAGAATTTATTTTTCAGA
TTTAGAGATAGATTCTCCCTATAATACATATATTAATAAAGGGTATCCTCCTACTCCAATTTCAAATGCTGGTATTATTT
CACTGCAAGCAGCTTTTTTCCCTAAAAATACGCAATATTTATTTTTTGTAGTACAAGACTCTAAGTTGGGCACACATCAA
TTTTCATCAGATTATTCTTCACATCTTTTAGGAGCAAAAGATTATATTAAAAATTTTATTACTAAGGATTAA

Upstream 100 bases:

>100_bases
TCTTATTGGTTATAAAATATGATGTTAGTTATCAGTTAAAGCTTTTAATTGATAACTAAAGAGTAATTAGCAAATACTTT
TGTTTAGCTAGGAGATTCTT

Downstream 100 bases:

>100_bases
GAAGTATGGAGTATTTACAAACTGCAGCTTCAATTAAAGCTAAATTTGATATTGTAGCTATTGTGGAGCAATATATTAAG
CTTGCTAAATCGGGATCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLIKSELLLVFISYIFGSDKQFK
EGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRRIASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGF
LFPDTYKFYKGMEIKNIVRMFVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA
LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFFPKNTQYLFFVVQDSKLGTHQ
FSSDYSSHLLGAKDYIKNFITKD

Sequences:

>Translated_343_residues
MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLIKSELLLVFISYIFGSDKQFK
EGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRRIASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGF
LFPDTYKFYKGMEIKNIVRMFVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA
LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFFPKNTQYLFFVVQDSKLGTHQ
FSSDYSSHLLGAKDYIKNFITKD
>Mature_343_residues
MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLIKSELLLVFISYIFGSDKQFK
EGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRRIASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGF
LFPDTYKFYKGMEIKNIVRMFVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA
LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFFPKNTQYLFFVVQDSKLGTHQ
FSSDYSSHLLGAKDYIKNFITKD

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=304, Percent_Identity=27.6315789473684, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 39706; Mature: 39706

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
KSELLLVFISYIFGSDKQFKEGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRR
HHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHH
IASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGFLFPDTYKFYKGMEIKNIVRM
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCHHHHHCCCCHHHHHHH
FVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA
HHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFF
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEEC
PKNTQYLFFVVQDSKLGTHQFSSDYSSHLLGAKDYIKNFITKD
CCCCCEEEEEEECCCCCCHHHHCCHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
KSELLLVFISYIFGSDKQFKEGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRR
HHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHH
IASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGFLFPDTYKFYKGMEIKNIVRM
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCHHHHHCCCCHHHHHHH
FVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA
HHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFF
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEEC
PKNTQYLFFVVQDSKLGTHQFSSDYSSHLLGAKDYIKNFITKD
CCCCCEEEEEEECCCCCCHHHHCCHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]