Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is yrrL [H]
Identifier: 51598962
GI number: 51598962
Start: 747199
End: 748230
Strand: Direct
Name: yrrL [H]
Synonym: BG0732
Alternate gene names: 51598962
Gene position: 747199-748230 (Clockwise)
Preceding gene: 51598961
Following gene: 51598963
Centisome position: 82.63
GC content: 27.81
Gene sequence:
>1032_bases GTGCTTATTAAAATTGGGAAAGTATTTATTCTTTTGTTCTTTTTAGGATCTGTTTTTTTAATTTTTATATATTTTTTAAA TCTATCTTCTTTAGCAAATGGTTTAGTTTATGAATTTGATGTTGAGAAAGGTTGGGGAGTTAAAAAAATAGCTAAAGAAT TAAAAAAACAAAAATTAATTAAATCCGAATTGCTTCTTGTTTTTATTTCGTATATTTTTGGTAGTGACAAACAATTTAAA GAGGGAAGATATTTAATCAATAGTGATCTTTCTACATTTGAGATGTATAAAGAGTTTTTAAGGGGATCTTCTAATGTAAA TATTGATGTTACAATACCCGAAGGGTATACTAGCAGAAGAATTGCTTCTAAGCTTAAAGAATTTGCTGTTATTGATGATG TTCAAGATTTTCTTTTTTTGATCAACGAAAAATCATTTATTTACGAGCTTGGGTTCGATTATGATTCTCTTGAGGGATTT TTATTCCCAGATACCTATAAATTTTATAAGGGTATGGAAATAAAGAATATTGTTCGCATGTTTGTTGACAATTTTTTTAA TAAGCTTAAATCTATAGGTGTTGTTTTTAGTGATTATTCAAATAAAGATCTTTACCATAGAGTAATAATAGCATCTATTG TTGAGCGTGAGTATAGAGTTAAAAGTGAAGCTTCAACTATGTCTTCGGTTTTTTATAACAGAATAAAATCCGGTATGGCA TTACAATCTTGTGCTACTATTGAATATATTATTACAGAGGAGCTAGGACGAAGCCATCCCAAAAGAATTTATTTTTCAGA TTTAGAGATAGATTCTCCCTATAATACATATATTAATAAAGGGTATCCTCCTACTCCAATTTCAAATGCTGGTATTATTT CACTGCAAGCAGCTTTTTTCCCTAAAAATACGCAATATTTATTTTTTGTAGTACAAGACTCTAAGTTGGGCACACATCAA TTTTCATCAGATTATTCTTCACATCTTTTAGGAGCAAAAGATTATATTAAAAATTTTATTACTAAGGATTAA
Upstream 100 bases:
>100_bases TCTTATTGGTTATAAAATATGATGTTAGTTATCAGTTAAAGCTTTTAATTGATAACTAAAGAGTAATTAGCAAATACTTT TGTTTAGCTAGGAGATTCTT
Downstream 100 bases:
>100_bases GAAGTATGGAGTATTTACAAACTGCAGCTTCAATTAAAGCTAAATTTGATATTGTAGCTATTGTGGAGCAATATATTAAG CTTGCTAAATCGGGATCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLIKSELLLVFISYIFGSDKQFK EGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRRIASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGF LFPDTYKFYKGMEIKNIVRMFVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFFPKNTQYLFFVVQDSKLGTHQ FSSDYSSHLLGAKDYIKNFITKD
Sequences:
>Translated_343_residues MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLIKSELLLVFISYIFGSDKQFK EGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRRIASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGF LFPDTYKFYKGMEIKNIVRMFVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFFPKNTQYLFFVVQDSKLGTHQ FSSDYSSHLLGAKDYIKNFITKD >Mature_343_residues MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLIKSELLLVFISYIFGSDKQFK EGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRRIASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGF LFPDTYKFYKGMEIKNIVRMFVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFFPKNTQYLFFVVQDSKLGTHQ FSSDYSSHLLGAKDYIKNFITKD
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=304, Percent_Identity=27.6315789473684, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 39706; Mature: 39706
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH KSELLLVFISYIFGSDKQFKEGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRR HHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHH IASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGFLFPDTYKFYKGMEIKNIVRM HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCHHHHHCCCCHHHHHHH FVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA HHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFF HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEEC PKNTQYLFFVVQDSKLGTHQFSSDYSSHLLGAKDYIKNFITKD CCCCCEEEEEEECCCCCCHHHHCCHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MLIKIGKVFILLFFLGSVFLIFIYFLNLSSLANGLVYEFDVEKGWGVKKIAKELKKQKLI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH KSELLLVFISYIFGSDKQFKEGRYLINSDLSTFEMYKEFLRGSSNVNIDVTIPEGYTSRR HHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHH IASKLKEFAVIDDVQDFLFLINEKSFIYELGFDYDSLEGFLFPDTYKFYKGMEIKNIVRM HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCHHHHHCCCCHHHHHHH FVDNFFNKLKSIGVVFSDYSNKDLYHRVIIASIVEREYRVKSEASTMSSVFYNRIKSGMA HHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LQSCATIEYIITEELGRSHPKRIYFSDLEIDSPYNTYINKGYPPTPISNAGIISLQAAFF HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEEC PKNTQYLFFVVQDSKLGTHQFSSDYSSHLLGAKDYIKNFITKD CCCCCEEEEEEECCCCCCHHHHCCHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]