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The map label for this gene is fni [H]

Identifier: 51598939

GI number: 51598939

Start: 727350

End: 728414

Strand: Direct

Name: fni [H]

Synonym: BG0707

Alternate gene names: 51598939

Gene position: 727350-728414 (Clockwise)

Preceding gene: 51598938

Following gene: 51598940

Centisome position: 80.44

GC content: 31.64

Gene sequence:

>1065_bases
ATGGGTATCGAGCCTAATATACTAGAAAATAAAAAAAGGCATATTGAAATTTGTTTAAATAAAAACGATGTTAAAGGTGG
CTGCAATTTTTTAAAGTTTATTAAGCTAAAACATAATGCTCTTAGTGATTTTAATTTTTCTGAGATAAGCTTAAAAGAAG
AAATATTTGGATACAATATTAATATGCCTGTTTTTATTTCTTCCATGACAGGAGGCGGTAAACAAGGGAATGATTTTAAT
AAATCTTTAGTTAAAATTGCAAATTATTTGAAAATTCCCATTGGCTTAGGTTCTTTTAAGCTTTTGTTTAAGTATCCCGA
ATATATAAGAGACTTTAGTCTTAAAAGGTATGCTTATGATATTCCTTTGTTTGCCAATATTGGCGCTGTTCAGATTGTTG
AGTTTGGTATTTCTAGAATAGCTGAAATGATCAAAAGATTGGAAGTTGATGCAATTGTTACCCATCTTAATGCAGGTCAG
GAATTGATGAATGTTAATGGAGACAGAAATTTTAAAGGAATAAAAGAGTCAATAGCTAAATTGGCTGATTTTTTAAGTGT
TCCATTGATTGTTAAAGAGACGGGTTTTGGAATTTCACCAAACGACGTTAAGGAATTATTGAAACTTGGTGTTTCTTATA
TTGATCTTGCGGGGAGTGGTGGAACTAATTGGGTCTTAGTAGAAGGTATAAGGAGTAATAATCTAAATGTTGCATCTTGT
TTTTCTGATTGGGGTATTCCTTCGATTTTTACTTTGCTTGGCATTGATGATTCTCTAAAGGCTAATGTTTTTGCATCTGG
TGGATATGAGACTGGTATGGATATTGCTAAAGGAATTGCTCTTGGAGCTAAGCTCATAGGCGTTGCAGCTGTTGTTCTTA
GAGCTTTTTATAATTCAGGAGAAGATGCTGTACTTAGTCTTTTTTCTGATTATGAGCATGTTTTAAAAATGTCTATGTTT
TTAAGTGGAAGTAAAAGTTTGTCAGAACTTAGAAAAAATAAGTATTTTTTGAGTAGCTATTTACTTGCAGAGCTTGGAGT
TTTTAAGCAGTTTTATGAAACTTAG

Upstream 100 bases:

>100_bases
AATTTTGAAGAATATAAAGATTTCTTTCAGAATAAAATAGTTCCTGGTGAATCCAAAGGATTTTATTTAAAAGAATTAAG
GAATGATAAATACCGAGTTT

Downstream 100 bases:

>100_bases
TAAAAATTTTAGGCATAAAAGTGTTTTAGAAAAAAGGCAAGAGATAAAAAGTTTTTTGGGATTATCTTTTAAAGATTTTT
TTTATAATAATGCCAATGAA

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MGIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISLKEEIFGYNINMPVFISSMTGGGKQGNDFN
KSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFSLKRYAYDIPLFANIGAVQIVEFGISRIAEMIKRLEVDAIVTHLNAGQ
ELMNVNGDRNFKGIKESIAKLADFLSVPLIVKETGFGISPNDVKELLKLGVSYIDLAGSGGTNWVLVEGIRSNNLNVASC
FSDWGIPSIFTLLGIDDSLKANVFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYNSGEDAVLSLFSDYEHVLKMSMF
LSGSKSLSELRKNKYFLSSYLLAELGVFKQFYET

Sequences:

>Translated_354_residues
MGIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISLKEEIFGYNINMPVFISSMTGGGKQGNDFN
KSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFSLKRYAYDIPLFANIGAVQIVEFGISRIAEMIKRLEVDAIVTHLNAGQ
ELMNVNGDRNFKGIKESIAKLADFLSVPLIVKETGFGISPNDVKELLKLGVSYIDLAGSGGTNWVLVEGIRSNNLNVASC
FSDWGIPSIFTLLGIDDSLKANVFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYNSGEDAVLSLFSDYEHVLKMSMF
LSGSKSLSELRKNKYFLSSYLLAELGVFKQFYET
>Mature_353_residues
GIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISLKEEIFGYNINMPVFISSMTGGGKQGNDFNK
SLVKIANYLKIPIGLGSFKLLFKYPEYIRDFSLKRYAYDIPLFANIGAVQIVEFGISRIAEMIKRLEVDAIVTHLNAGQE
LMNVNGDRNFKGIKESIAKLADFLSVPLIVKETGFGISPNDVKELLKLGVSYIDLAGSGGTNWVLVEGIRSNNLNVASCF
SDWGIPSIFTLLGIDDSLKANVFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYNSGEDAVLSLFSDYEHVLKMSMFL
SGSKSLSELRKNKYFLSSYLLAELGVFKQFYET

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 39106; Mature: 38975

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISLKEEIFGYNI
CCCCCCHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
NMPVFISSMTGGGKQGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFSLKRYAYD
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHEEC
IPLFANIGAVQIVEFGISRIAEMIKRLEVDAIVTHLNAGQELMNVNGDRNFKGIKESIAK
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHH
LADFLSVPLIVKETGFGISPNDVKELLKLGVSYIDLAGSGGTNWVLVEGIRSNNLNVASC
HHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCEEEEH
FSDWGIPSIFTLLGIDDSLKANVFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYNSG
HHCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDAVLSLFSDYEHVLKMSMFLSGSKSLSELRKNKYFLSSYLLAELGVFKQFYET
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEISLKEEIFGYNI
CCCCCHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
NMPVFISSMTGGGKQGNDFNKSLVKIANYLKIPIGLGSFKLLFKYPEYIRDFSLKRYAYD
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHEEC
IPLFANIGAVQIVEFGISRIAEMIKRLEVDAIVTHLNAGQELMNVNGDRNFKGIKESIAK
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHH
LADFLSVPLIVKETGFGISPNDVKELLKLGVSYIDLAGSGGTNWVLVEGIRSNNLNVASC
HHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCEEEEH
FSDWGIPSIFTLLGIDDSLKANVFASGGYETGMDIAKGIALGAKLIGVAAVVLRAFYNSG
HHCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDAVLSLFSDYEHVLKMSMFLSGSKSLSELRKNKYFLSSYLLAELGVFKQFYET
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA