Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598872
Identifier: 51598872
GI number: 51598872
Start: 647662
End: 648624
Strand: Direct
Name: 51598872
Synonym: BG0637
Alternate gene names: NA
Gene position: 647662-648624 (Clockwise)
Preceding gene: 51598870
Following gene: 51598874
Centisome position: 71.62
GC content: 29.49
Gene sequence:
>963_bases ATGAGAGATGTTATTAATTTTATTAAAAAGTATAATAATTTTATTATTATTGGACACAAAGATCCTGATTTTGATTGCAT AGGTTCGTCTTTGGCCTTATCATCTTTTCTCTCAAGAATTGGTAAAAATTCTGTTTTGTTAAATGAAGGTCCTTTTGTTA GAAAGGAAATAATTCCTTTTAAGGATAAATTTTTATCTGAATGGCCTAATATTGAGCTTTCAGATTATTCAGTTATTATT TTGGACTGTTCAATTTTAGATAGGATAGGCGATGAATTTATATTTTATGTAAAGGATATGCCTATTTTAGTAATCGATCA TCATATGTCTGGTGAAAAATTAAAATGGGAAAAGTATATTGATCCTTTTGCACCCTCTACTACTTTTTTAATTGAAAAAT TGATCCGAGAGTTTGGATATGATCTTACAAGAGAAGAAGCTTGGTATATTTTAGTAGGATTTTGTACCGATACTGGTTTT TTTAAATTTATTTCAAGAAGTGATCCAGAGCCTTTCGAAATGATTGCGAGACTAGTTTCAAAAGGAATAAGCCTTAAAGA AGTTCACAGCTATATAGAAACAACCAAAAGCCTAAAATCAATAGAAACTCTCAAGTTAATGTTAAACAGCCTTGAATCTT ATTGGAATGGAAAGGTTTTGTTTACATTTTTATCTTCTTCTAGTTTTAATAAAGATGGTAGTGTTAGTGGAGTTAATGAA CTTTTTTATATGATTTTAAGCAATGTTGAGAATAATGAAATTTTAGGCATTTTAAAGGAAATGGATGATGGTTCGATTAT AGTTGGGCTAAGGTCCAAAGATTCTTTTAATGTTGGAAAATTAGCAGAAGATTTTGGGGGCGGGGGGCATAAAAATGCTA GTGGGTTTAGAATTAAACAAAGTTCTCTGGAGATCGTAAAAAATCGAATGCTAGCATATATTAAGGATAATATTTATTTG TAA
Upstream 100 bases:
>100_bases ATTTTATTAGCTCTTGTGGCTTATTTTATTGAAATATTGTAATATAGTCAATGTAAAATAAGTTAAAAACTTGTTTTACG GAAGGTTTGCGGACTTTATT
Downstream 100 bases:
>100_bases TATTGCTTAAAGGGATATTTCCTTTTGGACCAAAATCCTTAGTGAGTGTTAAAAGTCCAGATTTAAATGCCAGAGGTGTT GTTCCATAAATGATTACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRDVINFIKKYNNFIIIGHKDPDFDCIGSSLALSSFLSRIGKNSVLLNEGPFVRKEIIPFKDKFLSEWPNIELSDYSVII LDCSILDRIGDEFIFYVKDMPILVIDHHMSGEKLKWEKYIDPFAPSTTFLIEKLIREFGYDLTREEAWYILVGFCTDTGF FKFISRSDPEPFEMIARLVSKGISLKEVHSYIETTKSLKSIETLKLMLNSLESYWNGKVLFTFLSSSSFNKDGSVSGVNE LFYMILSNVENNEILGILKEMDDGSIIVGLRSKDSFNVGKLAEDFGGGGHKNASGFRIKQSSLEIVKNRMLAYIKDNIYL
Sequences:
>Translated_320_residues MRDVINFIKKYNNFIIIGHKDPDFDCIGSSLALSSFLSRIGKNSVLLNEGPFVRKEIIPFKDKFLSEWPNIELSDYSVII LDCSILDRIGDEFIFYVKDMPILVIDHHMSGEKLKWEKYIDPFAPSTTFLIEKLIREFGYDLTREEAWYILVGFCTDTGF FKFISRSDPEPFEMIARLVSKGISLKEVHSYIETTKSLKSIETLKLMLNSLESYWNGKVLFTFLSSSSFNKDGSVSGVNE LFYMILSNVENNEILGILKEMDDGSIIVGLRSKDSFNVGKLAEDFGGGGHKNASGFRIKQSSLEIVKNRMLAYIKDNIYL >Mature_320_residues MRDVINFIKKYNNFIIIGHKDPDFDCIGSSLALSSFLSRIGKNSVLLNEGPFVRKEIIPFKDKFLSEWPNIELSDYSVII LDCSILDRIGDEFIFYVKDMPILVIDHHMSGEKLKWEKYIDPFAPSTTFLIEKLIREFGYDLTREEAWYILVGFCTDTGF FKFISRSDPEPFEMIARLVSKGISLKEVHSYIETTKSLKSIETLKLMLNSLESYWNGKVLFTFLSSSSFNKDGSVSGVNE LFYMILSNVENNEILGILKEMDDGSIIVGLRSKDSFNVGKLAEDFGGGGHKNASGFRIKQSSLEIVKNRMLAYIKDNIYL
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mgp1/MG371 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]
EC number: NA
Molecular weight: Translated: 36547; Mature: 36547
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDVINFIKKYNNFIIIGHKDPDFDCIGSSLALSSFLSRIGKNSVLLNEGPFVRKEIIPF CHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCH KDKFLSEWPNIELSDYSVIILDCSILDRIGDEFIFYVKDMPILVIDHHMSGEKLKWEKYI HHHHHHHCCCCEECCCEEEEEEHHHHHHCCHHEEEEEECCCEEEEECCCCCCCEEHHHHC DPFAPSTTFLIEKLIREFGYDLTREEAWYILVGFCTDTGFFKFISRSDPEPFEMIARLVS CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHH KGISLKEVHSYIETTKSLKSIETLKLMLNSLESYWNGKVLFTFLSSSSFNKDGSVSGVNE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHH LFYMILSNVENNEILGILKEMDDGSIIVGLRSKDSFNVGKLAEDFGGGGHKNASGFRIKQ HHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEH SSLEIVKNRMLAYIKDNIYL HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRDVINFIKKYNNFIIIGHKDPDFDCIGSSLALSSFLSRIGKNSVLLNEGPFVRKEIIPF CHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCH KDKFLSEWPNIELSDYSVIILDCSILDRIGDEFIFYVKDMPILVIDHHMSGEKLKWEKYI HHHHHHHCCCCEECCCEEEEEEHHHHHHCCHHEEEEEECCCEEEEECCCCCCCEEHHHHC DPFAPSTTFLIEKLIREFGYDLTREEAWYILVGFCTDTGFFKFISRSDPEPFEMIARLVS CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHH KGISLKEVHSYIETTKSLKSIETLKLMLNSLESYWNGKVLFTFLSSSSFNKDGSVSGVNE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHH LFYMILSNVENNEILGILKEMDDGSIIVGLRSKDSFNVGKLAEDFGGGGHKNASGFRIKQ HHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEH SSLEIVKNRMLAYIKDNIYL HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]