Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598853
Identifier: 51598853
GI number: 51598853
Start: 625363
End: 626934
Strand: Direct
Name: 51598853
Synonym: BG0613
Alternate gene names: NA
Gene position: 625363-626934 (Clockwise)
Preceding gene: 51598852
Following gene: 51598854
Centisome position: 69.16
GC content: 25.64
Gene sequence:
>1572_bases TTGGCTATTTTTTTTAAAAACAAATATTTTCATTTAAGTTTAATTTTTATTATTTTTTTATTTTTGTTTGTTTTTTCTGG ATTTTTATTTTATTCAAAGCCAATTATTTATGATATATCTCCAATTCCCACTTCACATAAGGATATTATTGTTATTAAGG GGAATAATTTAGGCTATAGTACAGGAGAGATCAATATTAACAATAATTATTTGGTTAAAAGTAGTATCATTAGTTGGAAC AACACCGAAATAGTTTTTAAAATTACAGATGAAGTAAATTCCGGACTTATTTTTGTAAAAAGCGAAAGAGGGACTAGTAA CGAACTTTTTCTTGTTATTAGTAGACAAGTTCCTGTTAAGCTTAATAGAGAAAATATTCCTTCTATTTTTTCAGAGGATA AAATAATTTTAAATGCAAATTCTTTAACTTTATTACAGGGTATGAATTTGTTTTCACGTTCTAGTGCTATTAAAATTTTT CTTGAAACCAAAGATAAATTTTATACAATTTTACCCCAAAATATTTTAAATGTTTCTGAGGATAGAGTAGAATTTATTTC TCCTAAAACTTTAAATTCTGACGGGAAGCTTTATGTTTTATTGGACAATCTTCAAAGCAATAAAGTTCCGTTTTCTGTTA AAAATGATTTTTTTAGGTGGACTTTGAATGATTCAAAAGAGTTTACAATAATTGAAGAAATTTATTTTAATCAAGATTTT AATCAGGATCTTGGTAGCAATGTTGATTCAAGACCTGAAGATATTAATTTTAATATCTTCTATTTAAGACCAATTGAAAA TGAGCGTCAAAAAATTATAGAGTGTAGCAGTGAGTCTCTTGATTTTAATATTGGTAATTTATTTTTTGAAAGCTTAAGGA CAAATAAATTTGTTTTTGAGACTAAGGTAAAGACACACAAACTTAATTTGGAATTTTTGGATACTAAATATTTAGAAAGC ATTAAGGTTAGTAGAGAAGATATTAACAATCAAGAGTACAAAACGTATGTTCAAGACAAAAAAAAAGATTATTTATCTTA CAGCTCCGTTGATTTAATATCGTTAGATTCTCTAATTTTATCTATGACTGCTGGAAATAATTCAGTTTATAAGTTGGCTA AAGCAATTATTGATGTTTTGACTTTAAATTTTAAAATTGTTGAGAATAATTTAAGCTTAAAGGATTCTATTAAAGAGAAA AAAATTTCATCTAGCAATTTAATACTTCTTACGAATTTACTATTTTTAAAATACGAGATTCCGCTTAGAAATATAGTTGG GCTTTACTACGATTCTAATTCTCTTAAATTGACTGAGCATTTTTGGTTTGAATTTTTTTTGGATGGGGTTGGTTTTGTAT ATTTTGATATAATAAATGCAGTATTATTTAAGGATAACTCTAAGTATTTTTTAAATATGTCTGAGAACTATATTCAATAT GGGTGCATAGAGGACTATGATAAAAATGAATTTTTTGATGGATACCTAGATTCTAGGTTTTTGAAGTATAAAAGCTTGAC AAACGGATCGTATTCTTTAATGCATAGGTTTGTTTTGGAGGATAATTTTTGA
Upstream 100 bases:
>100_bases AAATTTTAAGCGTGCAGATGAAATTAGGGATTTTTTTGCTAAAAAAGGTTTTGTTTTGATTGATACCAAGGAAGGAACTA AAGTTAAAAGAGGCTAGTAT
Downstream 100 bases:
>100_bases TGAGAGATGATCAAATATTTAATTTAATTGAGAAAGAGAAATTAAGAGAAAAAGAACATATTAAGCTTATTGCATCTGAA AATTTTACATCTTTAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MAIFFKNKYFHLSLIFIIFLFLFVFSGFLFYSKPIIYDISPIPTSHKDIIVIKGNNLGYSTGEININNNYLVKSSIISWN NTEIVFKITDEVNSGLIFVKSERGTSNELFLVISRQVPVKLNRENIPSIFSEDKIILNANSLTLLQGMNLFSRSSAIKIF LETKDKFYTILPQNILNVSEDRVEFISPKTLNSDGKLYVLLDNLQSNKVPFSVKNDFFRWTLNDSKEFTIIEEIYFNQDF NQDLGSNVDSRPEDINFNIFYLRPIENERQKIIECSSESLDFNIGNLFFESLRTNKFVFETKVKTHKLNLEFLDTKYLES IKVSREDINNQEYKTYVQDKKKDYLSYSSVDLISLDSLILSMTAGNNSVYKLAKAIIDVLTLNFKIVENNLSLKDSIKEK KISSSNLILLTNLLFLKYEIPLRNIVGLYYDSNSLKLTEHFWFEFFLDGVGFVYFDIINAVLFKDNSKYFLNMSENYIQY GCIEDYDKNEFFDGYLDSRFLKYKSLTNGSYSLMHRFVLEDNF
Sequences:
>Translated_523_residues MAIFFKNKYFHLSLIFIIFLFLFVFSGFLFYSKPIIYDISPIPTSHKDIIVIKGNNLGYSTGEININNNYLVKSSIISWN NTEIVFKITDEVNSGLIFVKSERGTSNELFLVISRQVPVKLNRENIPSIFSEDKIILNANSLTLLQGMNLFSRSSAIKIF LETKDKFYTILPQNILNVSEDRVEFISPKTLNSDGKLYVLLDNLQSNKVPFSVKNDFFRWTLNDSKEFTIIEEIYFNQDF NQDLGSNVDSRPEDINFNIFYLRPIENERQKIIECSSESLDFNIGNLFFESLRTNKFVFETKVKTHKLNLEFLDTKYLES IKVSREDINNQEYKTYVQDKKKDYLSYSSVDLISLDSLILSMTAGNNSVYKLAKAIIDVLTLNFKIVENNLSLKDSIKEK KISSSNLILLTNLLFLKYEIPLRNIVGLYYDSNSLKLTEHFWFEFFLDGVGFVYFDIINAVLFKDNSKYFLNMSENYIQY GCIEDYDKNEFFDGYLDSRFLKYKSLTNGSYSLMHRFVLEDNF >Mature_522_residues AIFFKNKYFHLSLIFIIFLFLFVFSGFLFYSKPIIYDISPIPTSHKDIIVIKGNNLGYSTGEININNNYLVKSSIISWNN TEIVFKITDEVNSGLIFVKSERGTSNELFLVISRQVPVKLNRENIPSIFSEDKIILNANSLTLLQGMNLFSRSSAIKIFL ETKDKFYTILPQNILNVSEDRVEFISPKTLNSDGKLYVLLDNLQSNKVPFSVKNDFFRWTLNDSKEFTIIEEIYFNQDFN QDLGSNVDSRPEDINFNIFYLRPIENERQKIIECSSESLDFNIGNLFFESLRTNKFVFETKVKTHKLNLEFLDTKYLESI KVSREDINNQEYKTYVQDKKKDYLSYSSVDLISLDSLILSMTAGNNSVYKLAKAIIDVLTLNFKIVENNLSLKDSIKEKK ISSSNLILLTNLLFLKYEIPLRNIVGLYYDSNSLKLTEHFWFEFFLDGVGFVYFDIINAVLFKDNSKYFLNMSENYIQYG CIEDYDKNEFFDGYLDSRFLKYKSLTNGSYSLMHRFVLEDNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61091; Mature: 60959
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFFKNKYFHLSLIFIIFLFLFVFSGFLFYSKPIIYDISPIPTSHKDIIVIKGNNLGYS CEEEEECCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCC TGEININNNYLVKSSIISWNNTEIVFKITDEVNSGLIFVKSERGTSNELFLVISRQVPVK CCEEEECCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCEE LNRENIPSIFSEDKIILNANSLTLLQGMNLFSRSSAIKIFLETKDKFYTILPQNILNVSE ECCCCCCCHHCCCEEEEECCCEEEECCCCCCCCCCEEEEEEECCCCEEEECCHHHHCCCC DRVEFISPKTLNSDGKLYVLLDNLQSNKVPFSVKNDFFRWTLNDSKEFTIIEEIYFNQDF CHHEEECCCEECCCCEEEEEEECCCCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCC NQDLGSNVDSRPEDINFNIFYLRPIENERQKIIECSSESLDFNIGNLFFESLRTNKFVFE CHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEHHHHHHHHHCCCEEEEE TKVKTHKLNLEFLDTKYLESIKVSREDINNQEYKTYVQDKKKDYLSYSSVDLISLDSLIL EEEEEEEEEEEEECHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCEEEE SMTAGNNSVYKLAKAIIDVLTLNFKIVENNLSLKDSIKEKKISSSNLILLTNLLFLKYEI EEECCCCHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEEEEEEEEC PLRNIVGLYYDSNSLKLTEHFWFEFFLDGVGFVYFDIINAVLFKDNSKYFLNMSENYIQY CHHHEEEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEEEECCCEEEE GCIEDYDKNEFFDGYLDSRFLKYKSLTNGSYSLMHRFVLEDNF CCCCCCCCCCCCCCHHHHHHEEEECCCCCCHHHHEEEEECCCC >Mature Secondary Structure AIFFKNKYFHLSLIFIIFLFLFVFSGFLFYSKPIIYDISPIPTSHKDIIVIKGNNLGYS EEEEECCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCC TGEININNNYLVKSSIISWNNTEIVFKITDEVNSGLIFVKSERGTSNELFLVISRQVPVK CCEEEECCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCEE LNRENIPSIFSEDKIILNANSLTLLQGMNLFSRSSAIKIFLETKDKFYTILPQNILNVSE ECCCCCCCHHCCCEEEEECCCEEEECCCCCCCCCCEEEEEEECCCCEEEECCHHHHCCCC DRVEFISPKTLNSDGKLYVLLDNLQSNKVPFSVKNDFFRWTLNDSKEFTIIEEIYFNQDF CHHEEECCCEECCCCEEEEEEECCCCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCC NQDLGSNVDSRPEDINFNIFYLRPIENERQKIIECSSESLDFNIGNLFFESLRTNKFVFE CHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEHHHHHHHHHCCCEEEEE TKVKTHKLNLEFLDTKYLESIKVSREDINNQEYKTYVQDKKKDYLSYSSVDLISLDSLIL EEEEEEEEEEEEECHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCEEEE SMTAGNNSVYKLAKAIIDVLTLNFKIVENNLSLKDSIKEKKISSSNLILLTNLLFLKYEI EEECCCCHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEEEEEEEEC PLRNIVGLYYDSNSLKLTEHFWFEFFLDGVGFVYFDIINAVLFKDNSKYFLNMSENYIQY CHHHEEEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEEEECCCEEEE GCIEDYDKNEFFDGYLDSRFLKYKSLTNGSYSLMHRFVLEDNF CCCCCCCCCCCCCCHHHHHHEEEECCCCCCHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA