Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is pfs-2 [H]
Identifier: 51598841
GI number: 51598841
Start: 609072
End: 609866
Strand: Direct
Name: pfs-2 [H]
Synonym: BG0601
Alternate gene names: 51598841
Gene position: 609072-609866 (Clockwise)
Preceding gene: 51598838
Following gene: 51598842
Centisome position: 67.36
GC content: 29.94
Gene sequence:
>795_bases ATGAACAATTTTTTAAGAAAATTTTTTCTTTTTTTATTAGTTTTTTCAAACGGCTATGTTGCTTTTTCTAAAAACATCAA TGTTTTAATAGTAACTGCCATGGATTCTGAGCTCGAAGAGATAAACAAGCTGATGTCTAATAAGGAAGAAATAGTACTTA AGGAATATGGTCTTAATAAAAAGATTGTAAAGGGTAAGTTGTCTAATCGCAATGTTATGGCTATTGTTTGTGGGGTTGGC AAGGTTAATGCAGGTGTGTGGACTAGCTATATTTTGTCAAAATACAATATCAGTCATGTAATTAATTATGGAGTTGCTGG TGGCGTTATTAGTGATAAATACAAAGATATTAAAGTGGGAGATATAGTAGTGTCTTCAGAGATTGCATATCATGATGTTG ATTTAACTAAATTTGGTTATAAGATGGGACAGCTTATGGGATTACCTCAAAAATTTATTGCCAATAAAAATTTGGTTAAC AAAGCTAAAGAGGCCGTTAAATTAAAGGTTAGAGGCTCTAATGCATATTCAGGATTAATATTAACAGGAGATCAGTTTAT TGACCCAATTTATATCAAAAAAATTATAAGAGACTTTAAAGATGTAATAGCTGTTGAGATGGAAGGTGCAGCAATAGGGC ATGTTGCTCATATGTTGAATGTACCTTTTGTAGTTATTAGGTCCATATCTGACATTGTAAATAAAGAAGAAAATGAGGTT GAATATAGTAAATTTTTAAAATTAGCTTCTTTTAATTCAGCTAAAGTTGTACAAGAAATTTTAAGAATTCTTTAA
Upstream 100 bases:
>100_bases TCAATACCTTTTATAAAAATTATTTCAAAAGTAATTCAATTTTGATTTTTTTTTGTAAAATAATGCTATAAATGTTTTTT GCTATAAGGAGTGTGTTTTT
Downstream 100 bases:
>100_bases GGAATATTTAATTTTTATAATTGAAAAATTATGCATGAGAAAAGATCTTTTTATTTAAAAAATATCTTTTCTTTATGCAC TTGTAAATTTATGTTTTAAT
Product: 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNNFLRKFFLFLLVFSNGYVAFSKNINVLIVTAMDSELEEINKLMSNKEEIVLKEYGLNKKIVKGKLSNRNVMAIVCGVG KVNAGVWTSYILSKYNISHVINYGVAGGVISDKYKDIKVGDIVVSSEIAYHDVDLTKFGYKMGQLMGLPQKFIANKNLVN KAKEAVKLKVRGSNAYSGLILTGDQFIDPIYIKKIIRDFKDVIAVEMEGAAIGHVAHMLNVPFVVIRSISDIVNKEENEV EYSKFLKLASFNSAKVVQEILRIL
Sequences:
>Translated_264_residues MNNFLRKFFLFLLVFSNGYVAFSKNINVLIVTAMDSELEEINKLMSNKEEIVLKEYGLNKKIVKGKLSNRNVMAIVCGVG KVNAGVWTSYILSKYNISHVINYGVAGGVISDKYKDIKVGDIVVSSEIAYHDVDLTKFGYKMGQLMGLPQKFIANKNLVN KAKEAVKLKVRGSNAYSGLILTGDQFIDPIYIKKIIRDFKDVIAVEMEGAAIGHVAHMLNVPFVVIRSISDIVNKEENEV EYSKFLKLASFNSAKVVQEILRIL >Mature_264_residues MNNFLRKFFLFLLVFSNGYVAFSKNINVLIVTAMDSELEEINKLMSNKEEIVLKEYGLNKKIVKGKLSNRNVMAIVCGVG KVNAGVWTSYILSKYNISHVINYGVAGGVISDKYKDIKVGDIVVSSEIAYHDVDLTKFGYKMGQLMGLPQKFIANKNLVN KAKEAVKLKVRGSNAYSGLILTGDQFIDPIYIKKIIRDFKDVIAVEMEGAAIGHVAHMLNVPFVVIRSISDIVNKEENEV EYSKFLKLASFNSAKVVQEILRIL
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786354, Length=236, Percent_Identity=37.2881355932203, Blast_Score=133, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.9 [H]
Molecular weight: Translated: 29538; Mature: 29538
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFLRKFFLFLLVFSNGYVAFSKNINVLIVTAMDSELEEINKLMSNKEEIVLKEYGLNK CCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHHHHHHHHHHCCCHHEEHHHCCCCH KIVKGKLSNRNVMAIVCGVGKVNAGVWTSYILSKYNISHVINYGVAGGVISDKYKDIKVG HHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCEEEC DIVVSSEIAYHDVDLTKFGYKMGQLMGLPQKFIANKNLVNKAKEAVKLKVRGSNAYSGLI EEEEECCCEEECCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHEEEEEECCCCCCEEE LTGDQFIDPIYIKKIIRDFKDVIAVEMEGAAIGHVAHMLNVPFVVIRSISDIVNKEENEV EECHHHHCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH EYSKFLKLASFNSAKVVQEILRIL HHHHHHHHHCCCHHHHHHHHHHHC >Mature Secondary Structure MNNFLRKFFLFLLVFSNGYVAFSKNINVLIVTAMDSELEEINKLMSNKEEIVLKEYGLNK CCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHHHHHHHHHHCCCHHEEHHHCCCCH KIVKGKLSNRNVMAIVCGVGKVNAGVWTSYILSKYNISHVINYGVAGGVISDKYKDIKVG HHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCEEEC DIVVSSEIAYHDVDLTKFGYKMGQLMGLPQKFIANKNLVNKAKEAVKLKVRGSNAYSGLI EEEEECCCEEECCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHEEEEEECCCCCCEEE LTGDQFIDPIYIKKIIRDFKDVIAVEMEGAAIGHVAHMLNVPFVVIRSISDIVNKEENEV EECHHHHCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH EYSKFLKLASFNSAKVVQEILRIL HHHHHHHHHCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA