Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is yeeO [C]
Identifier: 51598837
GI number: 51598837
Start: 602966
End: 604321
Strand: Direct
Name: yeeO [C]
Synonym: BG0597
Alternate gene names: 51598837
Gene position: 602966-604321 (Clockwise)
Preceding gene: 51598836
Following gene: 51598838
Centisome position: 66.68
GC content: 27.29
Gene sequence:
>1356_bases ATGTATTCATTAAGTGTGTTAAAAAAAAATAAAATTTATAAAGATCTTCTAAAAATTGCAATTCCAACCGCTATTGAGTT TTTTTTATTTAATTTTATTTCTCTTACAGATAATGCTATGGTTGCATATCTTGGCGATTATCCTGTTGCGGGAGTTTCTC TTGCAAATAAATTTTTTGAACTGTTTGTTACTATTGGGTTTGCTATGGTAGGGGCTTACAATATAATTGCCACAAGGCAA TACAATCGGGGTGATTTTAAGAGTTTTAGAAATACATTTTTTATTAGTATATTAATTATTATTTTATTTTCTTTCCCGTT TATATTGATTTCGAAATTGAATCCTTTTTTTTTACTTAGATTAATTTCTAATGATTTGCAGGCAGTTTATTATGGAGCGA TTTATTTAAACATAGCTATTTTTTCCTTCGTATTTGCAATCATAAAAGGACTTGTTGCTAATGCTCTTAAAGTTGTTGAG ATTGTTAAATTTCAAGTTTACATTTCTGTTTTTTCAGTTCTTTTAAATCTAATATTAAATTATATTTTTATTTTTGGTTT TCGTATGGGAGTAGTTGGAGCTGCTATTGCAACAACAGCTATTCGTGCCTTAGAGCTTATTGTTTATCTTATTTATACAG TGTTTAACAAGAATTCAGTTTTGAATCTTAAGCTTGATGATTTAAATATTAATATTAAGTCGTTTGTTCAGCTAATTAAA TTTTTTATTCCAATTCTTTTAAATGATTTTATTTGGTTTTTTGGCTATCTTGTGTTGACATCAATTTTTATAGGAATTGA TACTCATAAATATGCTGCTTATAGTATATCTTTTTCTATTTATTTTATTATCTTTAATATAATAAATTCCTTTTGCATCT CTTTAAATATTATGATGGGCTATGAAATGCATAATAATAGTAAAAAAGAAGTCATGAAAGTTGCAGTCTATTTAGGTAAC ATTGGCTTCAAACTTGCTTTTTTAACATCTTTTGCATTGTTTGTATTTTCATTTTTTGCTCCCTATATTTTTTATACATT AAAATATTCGCAACTTACAGGAATTATTTTAAGGTATTCTTCTATTTCTGCCTTTTTTATGGCGCTTGCTTTTCAGTATC TTTTTGGATTTTTTCGTGCAGGAGCATCTCCAAGCTTTGGGGCTATTATGGAAGCTTCTGTAACGTTTATTTATACTATT CCTATTGCTTTTGTTTTAGCAAATTATACAAATTTGTCTTTTGAAATCATTGTTTTTATTCCAGCTCTTGAGGATGCAAT AAAACTTGCTATTTCGCTTCCTTATTTTTATAGTGAAAGGTGGATTAAACCTGTTAAAACAAGTTGGTGGGTTTGA
Upstream 100 bases:
>100_bases CATTCTGATTATACTGATTTAAAAGCAATTCCTTTTGTTTTATTGCAGTGTTTTAGTATTTGTCTTTGCAAAAGTCTTGA TTTTTTATTTGGAGAAGTTC
Downstream 100 bases:
>100_bases TATAATCTTATTGTGCGTTTAGACGAAATTAAAAATTTAAATTTTTTAGTCATGGGATTAGGTCTTAATGGAGGGGGAGT AGCTCTTTCTAGATTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Na+ Driven Multidrug Efflux Pump; Mate Efflux Family Protein; Na+-Driven Multidrug Efflux Pump; Drug/Sodium Antiporter; Cation Efflux Pump
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFELFVTIGFAMVGAYNIIATRQ YNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLRLISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVE IVKFQVYISVFSVLLNLILNYIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMGYEMHNNSKKEVMKVAVYLGN IGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYSSISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTI PIAFVLANYTNLSFEIIVFIPALEDAIKLAISLPYFYSERWIKPVKTSWWV
Sequences:
>Translated_451_residues MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFELFVTIGFAMVGAYNIIATRQ YNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLRLISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVE IVKFQVYISVFSVLLNLILNYIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMGYEMHNNSKKEVMKVAVYLGN IGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYSSISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTI PIAFVLANYTNLSFEIIVFIPALEDAIKLAISLPYFYSERWIKPVKTSWWV >Mature_451_residues MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFELFVTIGFAMVGAYNIIATRQ YNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLRLISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVE IVKFQVYISVFSVLLNLILNYIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMGYEMHNNSKKEVMKVAVYLGN IGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYSSISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTI PIAFVLANYTNLSFEIIVFIPALEDAIKLAISLPYFYSERWIKPVKTSWWV
Specific function: Unknown
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51577; Mature: 51577
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH LFVTIGFAMVGAYNIIATRQYNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLR HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVEIVKFQVYISVFSVLLNLILN HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEE YEMHNNSKKEVMKVAVYLGNIGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYS EEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTIPIAFVLANYTNLSFEIIVFI HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE PALEDAIKLAISLPYFYSERWIKPVKTSWWV ECHHHHHHHHHCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH LFVTIGFAMVGAYNIIATRQYNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLR HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVEIVKFQVYISVFSVLLNLILN HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEE YEMHNNSKKEVMKVAVYLGNIGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYS EEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTIPIAFVLANYTNLSFEIIVFI HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE PALEDAIKLAISLPYFYSERWIKPVKTSWWV ECHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA