Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is yeeO [C]

Identifier: 51598837

GI number: 51598837

Start: 602966

End: 604321

Strand: Direct

Name: yeeO [C]

Synonym: BG0597

Alternate gene names: 51598837

Gene position: 602966-604321 (Clockwise)

Preceding gene: 51598836

Following gene: 51598838

Centisome position: 66.68

GC content: 27.29

Gene sequence:

>1356_bases
ATGTATTCATTAAGTGTGTTAAAAAAAAATAAAATTTATAAAGATCTTCTAAAAATTGCAATTCCAACCGCTATTGAGTT
TTTTTTATTTAATTTTATTTCTCTTACAGATAATGCTATGGTTGCATATCTTGGCGATTATCCTGTTGCGGGAGTTTCTC
TTGCAAATAAATTTTTTGAACTGTTTGTTACTATTGGGTTTGCTATGGTAGGGGCTTACAATATAATTGCCACAAGGCAA
TACAATCGGGGTGATTTTAAGAGTTTTAGAAATACATTTTTTATTAGTATATTAATTATTATTTTATTTTCTTTCCCGTT
TATATTGATTTCGAAATTGAATCCTTTTTTTTTACTTAGATTAATTTCTAATGATTTGCAGGCAGTTTATTATGGAGCGA
TTTATTTAAACATAGCTATTTTTTCCTTCGTATTTGCAATCATAAAAGGACTTGTTGCTAATGCTCTTAAAGTTGTTGAG
ATTGTTAAATTTCAAGTTTACATTTCTGTTTTTTCAGTTCTTTTAAATCTAATATTAAATTATATTTTTATTTTTGGTTT
TCGTATGGGAGTAGTTGGAGCTGCTATTGCAACAACAGCTATTCGTGCCTTAGAGCTTATTGTTTATCTTATTTATACAG
TGTTTAACAAGAATTCAGTTTTGAATCTTAAGCTTGATGATTTAAATATTAATATTAAGTCGTTTGTTCAGCTAATTAAA
TTTTTTATTCCAATTCTTTTAAATGATTTTATTTGGTTTTTTGGCTATCTTGTGTTGACATCAATTTTTATAGGAATTGA
TACTCATAAATATGCTGCTTATAGTATATCTTTTTCTATTTATTTTATTATCTTTAATATAATAAATTCCTTTTGCATCT
CTTTAAATATTATGATGGGCTATGAAATGCATAATAATAGTAAAAAAGAAGTCATGAAAGTTGCAGTCTATTTAGGTAAC
ATTGGCTTCAAACTTGCTTTTTTAACATCTTTTGCATTGTTTGTATTTTCATTTTTTGCTCCCTATATTTTTTATACATT
AAAATATTCGCAACTTACAGGAATTATTTTAAGGTATTCTTCTATTTCTGCCTTTTTTATGGCGCTTGCTTTTCAGTATC
TTTTTGGATTTTTTCGTGCAGGAGCATCTCCAAGCTTTGGGGCTATTATGGAAGCTTCTGTAACGTTTATTTATACTATT
CCTATTGCTTTTGTTTTAGCAAATTATACAAATTTGTCTTTTGAAATCATTGTTTTTATTCCAGCTCTTGAGGATGCAAT
AAAACTTGCTATTTCGCTTCCTTATTTTTATAGTGAAAGGTGGATTAAACCTGTTAAAACAAGTTGGTGGGTTTGA

Upstream 100 bases:

>100_bases
CATTCTGATTATACTGATTTAAAAGCAATTCCTTTTGTTTTATTGCAGTGTTTTAGTATTTGTCTTTGCAAAAGTCTTGA
TTTTTTATTTGGAGAAGTTC

Downstream 100 bases:

>100_bases
TATAATCTTATTGTGCGTTTAGACGAAATTAAAAATTTAAATTTTTTAGTCATGGGATTAGGTCTTAATGGAGGGGGAGT
AGCTCTTTCTAGATTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Na+ Driven Multidrug Efflux Pump; Mate Efflux Family Protein; Na+-Driven Multidrug Efflux Pump; Drug/Sodium Antiporter; Cation Efflux Pump

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFELFVTIGFAMVGAYNIIATRQ
YNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLRLISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVE
IVKFQVYISVFSVLLNLILNYIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK
FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMGYEMHNNSKKEVMKVAVYLGN
IGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYSSISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTI
PIAFVLANYTNLSFEIIVFIPALEDAIKLAISLPYFYSERWIKPVKTSWWV

Sequences:

>Translated_451_residues
MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFELFVTIGFAMVGAYNIIATRQ
YNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLRLISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVE
IVKFQVYISVFSVLLNLILNYIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK
FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMGYEMHNNSKKEVMKVAVYLGN
IGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYSSISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTI
PIAFVLANYTNLSFEIIVFIPALEDAIKLAISLPYFYSERWIKPVKTSWWV
>Mature_451_residues
MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFELFVTIGFAMVGAYNIIATRQ
YNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLRLISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVE
IVKFQVYISVFSVLLNLILNYIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK
FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMGYEMHNNSKKEVMKVAVYLGN
IGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYSSISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTI
PIAFVLANYTNLSFEIIVFIPALEDAIKLAISLPYFYSERWIKPVKTSWWV

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51577; Mature: 51577

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
LFVTIGFAMVGAYNIIATRQYNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLR
HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVEIVKFQVYISVFSVLLNLILN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH
FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEE
YEMHNNSKKEVMKVAVYLGNIGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYS
EEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTIPIAFVLANYTNLSFEIIVFI
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
PALEDAIKLAISLPYFYSERWIKPVKTSWWV
ECHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYSLSVLKKNKIYKDLLKIAIPTAIEFFLFNFISLTDNAMVAYLGDYPVAGVSLANKFFE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
LFVTIGFAMVGAYNIIATRQYNRGDFKSFRNTFFISILIIILFSFPFILISKLNPFFLLR
HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LISNDLQAVYYGAIYLNIAIFSFVFAIIKGLVANALKVVEIVKFQVYISVFSVLLNLILN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIFIFGFRMGVVGAAIATTAIRALELIVYLIYTVFNKNSVLNLKLDDLNINIKSFVQLIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH
FFIPILLNDFIWFFGYLVLTSIFIGIDTHKYAAYSISFSIYFIIFNIINSFCISLNIMMG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEE
YEMHNNSKKEVMKVAVYLGNIGFKLAFLTSFALFVFSFFAPYIFYTLKYSQLTGIILRYS
EEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISAFFMALAFQYLFGFFRAGASPSFGAIMEASVTFIYTIPIAFVLANYTNLSFEIIVFI
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
PALEDAIKLAISLPYFYSERWIKPVKTSWWV
ECHHHHHHHHHCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA