Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is cheW-2 [H]
Identifier: 51598816
GI number: 51598816
Start: 579337
End: 579879
Strand: Direct
Name: cheW-2 [H]
Synonym: BG0575
Alternate gene names: 51598816
Gene position: 579337-579879 (Clockwise)
Preceding gene: 51598812
Following gene: 51598817
Centisome position: 64.07
GC content: 30.02
Gene sequence:
>543_bases ATGGGCATGGATTCAGATATGCAAGATTCTTTAAGCCAGTATCTTTTATTTAGTTTGGACGAGCTTTATGCTATTGAGGT TAAATATGTTGTTGAGGTTTTAGAATATACCAAAATATCAAAAATCCCAAGGACTCCTAGTTATATGGCAGGAATAATAA ATAATAGAGGTAAGATCGTTCCAATAATTGATATTCGAAAACAATTTGGAATGGATGATCGTGTTGTTGATGAGGATGCA AAAAAGAGAAATAAGGGAGTTAATATTTCAAATATTATTATATTGACTTTAGTTTACGAGGGGGATGAATTTAATCTTGG AATTTTAGTAGATTATGTCAATGAAGTTCTTGAATTAGATCCATTTAGTATTGATGACGCTCCTAAGATTGGATCAGGAT TTAATTCAAAATTTATTTCAGGAATTGGCAAGAGTAATAATAAGTTTATTATTATTTTAGATGTAGAAAATTTATTTGAC GTTAGAGAGCTTTCTAGATTTAGAAATACAACAATATATGATCCCGAGCATCAGCAGCAATAG
Upstream 100 bases:
>100_bases TTTTATTAGTTTTTAATTTGTATTTATTAATATATGAGGTAATATTAATCTTAATATTAACATTCTATTTGCGATTTAAA TTGTATTTAAAGGGGCGTTT
Downstream 100 bases:
>100_bases GAGTTTTAGTCATGATTTATAGGCCTGAGGGAGAGCTTGTAGTAAATAGTATTTTTAAGGTAAAAGAAGATTTGTTGCAT ATTTTTAAAAAAATGAAAGA
Product: purine-binding chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MGMDSDMQDSLSQYLLFSLDELYAIEVKYVVEVLEYTKISKIPRTPSYMAGIINNRGKIVPIIDIRKQFGMDDRVVDEDA KKRNKGVNISNIIILTLVYEGDEFNLGILVDYVNEVLELDPFSIDDAPKIGSGFNSKFISGIGKSNNKFIIILDVENLFD VRELSRFRNTTIYDPEHQQQ
Sequences:
>Translated_180_residues MGMDSDMQDSLSQYLLFSLDELYAIEVKYVVEVLEYTKISKIPRTPSYMAGIINNRGKIVPIIDIRKQFGMDDRVVDEDA KKRNKGVNISNIIILTLVYEGDEFNLGILVDYVNEVLELDPFSIDDAPKIGSGFNSKFISGIGKSNNKFIIILDVENLFD VRELSRFRNTTIYDPEHQQQ >Mature_179_residues GMDSDMQDSLSQYLLFSLDELYAIEVKYVVEVLEYTKISKIPRTPSYMAGIINNRGKIVPIIDIRKQFGMDDRVVDEDAK KRNKGVNISNIIILTLVYEGDEFNLGILVDYVNEVLELDPFSIDDAPKIGSGFNSKFISGIGKSNNKFIIILDVENLFDV RELSRFRNTTIYDPEHQQQ
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=159, Percent_Identity=30.188679245283, Blast_Score=78, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 20580; Mature: 20449
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMDSDMQDSLSQYLLFSLDELYAIEVKYVVEVLEYTKISKIPRTPSYMAGIINNRGKIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEE PIIDIRKQFGMDDRVVDEDAKKRNKGVNISNIIILTLVYEGDEFNLGILVDYVNEVLELD EEEECHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCC PFSIDDAPKIGSGFNSKFISGIGKSNNKFIIILDVENLFDVRELSRFRNTTIYDPEHQQQ CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GMDSDMQDSLSQYLLFSLDELYAIEVKYVVEVLEYTKISKIPRTPSYMAGIINNRGKIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEE PIIDIRKQFGMDDRVVDEDAKKRNKGVNISNIIILTLVYEGDEFNLGILVDYVNEVLELD EEEECHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCC PFSIDDAPKIGSGFNSKFISGIGKSNNKFIIILDVENLFDVRELSRFRNTTIYDPEHQQQ CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]