Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is trxB [H]
Identifier: 51598769
GI number: 51598769
Start: 528627
End: 529607
Strand: Direct
Name: trxB [H]
Synonym: BG0526
Alternate gene names: 51598769
Gene position: 528627-529607 (Clockwise)
Preceding gene: 51598768
Following gene: 51598774
Centisome position: 58.46
GC content: 30.07
Gene sequence:
>981_bases ATGTTAGAATTTGAAACTATTAATGTAAATCTGACCAAAAAGGAAAATTTATCTCAAAAAGAGATAGAATTTATTGAAGA TGTAATAATTTTAGGATCTGGTCCGGCTGGATTAACAGCTGGTATTTATTCTGTTATGAGTAATTATAAAGTTACTATTT TAGAAGGCCCTGAACCTGGAGGACAGCTTACTACAACTACAGAAGTTTATAATTATCCTGGCTTTAAAAATGGAATAAGT GGTAGAGATTTGATGTTAAATATGAGAGAGCAAGTAGTAAATCTTGGAGCCAAAACTTTTCCCGAAACTGTTTTTTCTAT AAAAAGGGAGAATAGTATTTTTTACCTTTATACAGAAAATTATATTTATAAAAGTAAAGCTGTTATTATTGCTGTGGGAT CAAAACCTAAAAAACTTGAAACTCTTAAAAATTCAGATTTATTTTGGAATAAGGGTATTTCGGTTTGTGCTATTTGTGAT GGACATCTTTTTAAAGGTAAAAGGGTTGCCGTAATTGGTGGAGGCAATACTGCCCTTTCAGAATCAATTTATTTAAGCAA ATTAGTGGATAAGGTTTATATTATTGTAAGAAAAGATTATCTTAGAGCTATTGCTATGCTAAGAGATAGTGTTGCGAAGT TGCCTAATATTGAGATTTTTTATAATTCAGAAGCCATAGAAGTAGATGGCGAATCTTCTGTTTCTTCGATTAAGATTTTT AATGAAAAAGATAATGTTGTAAATAAATTAAAAGTAAATGGTGTATTTATGGCTGTTGGTTATAAGCCGAATACAGAATT TTTAAAGGGATTTTTAGATTTGGATGAAGAGGGATTTATTATAACTAAAGATATTGTTAAAACAAGTGTTGATGGTGTTT TTTCGTGTGGAGATGTTAGCAATAAACTTTATGCTCAAGCCATTACTGCTGCTGCTGAAGGGTTTATTGCATCTGTTGAG TTAGGAAATTTTTTAAAATAG
Upstream 100 bases:
>100_bases AATATCAATAAACTTGTGAGTCAATCTTAAATATTTAATATTAATTTTAGCAATGCTAAGATTTGTATTGAAGTTTTTAA GAGAGGCTTAAAATTTATAT
Downstream 100 bases:
>100_bases TTTTTATTAAGATATTTTTTAGTTTTAGATAAAGCTTTAATTTAATGTTTTAGAGTAGATTTAATTGCCTTTTGATTTCA AAAATTAAAATGCCTGTTGA
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MLEFETINVNLTKKENLSQKEIEFIEDVIILGSGPAGLTAGIYSVMSNYKVTILEGPEPGGQLTTTTEVYNYPGFKNGIS GRDLMLNMREQVVNLGAKTFPETVFSIKRENSIFYLYTENYIYKSKAVIIAVGSKPKKLETLKNSDLFWNKGISVCAICD GHLFKGKRVAVIGGGNTALSESIYLSKLVDKVYIIVRKDYLRAIAMLRDSVAKLPNIEIFYNSEAIEVDGESSVSSIKIF NEKDNVVNKLKVNGVFMAVGYKPNTEFLKGFLDLDEEGFIITKDIVKTSVDGVFSCGDVSNKLYAQAITAAAEGFIASVE LGNFLK
Sequences:
>Translated_326_residues MLEFETINVNLTKKENLSQKEIEFIEDVIILGSGPAGLTAGIYSVMSNYKVTILEGPEPGGQLTTTTEVYNYPGFKNGIS GRDLMLNMREQVVNLGAKTFPETVFSIKRENSIFYLYTENYIYKSKAVIIAVGSKPKKLETLKNSDLFWNKGISVCAICD GHLFKGKRVAVIGGGNTALSESIYLSKLVDKVYIIVRKDYLRAIAMLRDSVAKLPNIEIFYNSEAIEVDGESSVSSIKIF NEKDNVVNKLKVNGVFMAVGYKPNTEFLKGFLDLDEEGFIITKDIVKTSVDGVFSCGDVSNKLYAQAITAAAEGFIASVE LGNFLK >Mature_326_residues MLEFETINVNLTKKENLSQKEIEFIEDVIILGSGPAGLTAGIYSVMSNYKVTILEGPEPGGQLTTTTEVYNYPGFKNGIS GRDLMLNMREQVVNLGAKTFPETVFSIKRENSIFYLYTENYIYKSKAVIIAVGSKPKKLETLKNSDLFWNKGISVCAICD GHLFKGKRVAVIGGGNTALSESIYLSKLVDKVYIIVRKDYLRAIAMLRDSVAKLPNIEIFYNSEAIEVDGESSVSSIKIF NEKDNVVNKLKVNGVFMAVGYKPNTEFLKGFLDLDEEGFIITKDIVKTSVDGVFSCGDVSNKLYAQAITAAAEGFIASVE LGNFLK
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=309, Percent_Identity=37.8640776699029, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI87081763, Length=309, Percent_Identity=32.3624595469256, Blast_Score=134, Evalue=9e-33, Organism=Saccharomyces cerevisiae, GI6321898, Length=311, Percent_Identity=40.5144694533762, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320560, Length=311, Percent_Identity=40.1929260450161, Blast_Score=224, Evalue=1e-59,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 35940; Mature: 35940
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEFETINVNLTKKENLSQKEIEFIEDVIILGSGPAGLTAGIYSVMSNYKVTILEGPEPG CCEEEEEEEEEECCCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCC GQLTTTTEVYNYPGFKNGISGRDLMLNMREQVVNLGAKTFPETVFSIKRENSIFYLYTEN CCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHEECCCCEEEEEECC YIYKSKAVIIAVGSKPKKLETLKNSDLFWNKGISVCAICDGHLFKGKRVAVIGGGNTALS EEEECCEEEEEECCCCHHHHHHCCCCCEECCCCEEEEEECCCEECCCEEEEEECCCCHHH ESIYLSKLVDKVYIIVRKDYLRAIAMLRDSVAKLPNIEIFYNSEAIEVDGESSVSSIKIF HHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCEEEEEE NEKDNVVNKLKVNGVFMAVGYKPNTEFLKGFLDLDEEGFIITKDIVKTSVDGVFSCGDVS CCCCCCEEEEEECEEEEEEECCCCHHHHHHHHCCCCCCEEEEHHHHHHHHCCEEECCCCC NKLYAQAITAAAEGFIASVELGNFLK HHHHHHHHHHHHCCEEEEECCCCCCC >Mature Secondary Structure MLEFETINVNLTKKENLSQKEIEFIEDVIILGSGPAGLTAGIYSVMSNYKVTILEGPEPG CCEEEEEEEEEECCCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCC GQLTTTTEVYNYPGFKNGISGRDLMLNMREQVVNLGAKTFPETVFSIKRENSIFYLYTEN CCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHEECCCCEEEEEECC YIYKSKAVIIAVGSKPKKLETLKNSDLFWNKGISVCAICDGHLFKGKRVAVIGGGNTALS EEEECCEEEEEECCCCHHHHHHCCCCCEECCCCEEEEEECCCEECCCEEEEEECCCCHHH ESIYLSKLVDKVYIIVRKDYLRAIAMLRDSVAKLPNIEIFYNSEAIEVDGESSVSSIKIF HHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCEEEEEE NEKDNVVNKLKVNGVFMAVGYKPNTEFLKGFLDLDEEGFIITKDIVKTSVDGVFSCGDVS CCCCCCEEEEEECEEEEEEECCCCHHHHHHHHCCCCCCEEEEHHHHHHHHCCEEECCCCC NKLYAQAITAAAEGFIASVELGNFLK HHHHHHHHHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]