Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is ppaX [H]
Identifier: 51598765
GI number: 51598765
Start: 518100
End: 518786
Strand: Direct
Name: ppaX [H]
Synonym: BG0522
Alternate gene names: 51598765
Gene position: 518100-518786 (Clockwise)
Preceding gene: 51598764
Following gene: 51598766
Centisome position: 57.3
GC content: 25.91
Gene sequence:
>687_bases ATGATTAAAGCTGTAATATTTGATTTAGATGGTACCTTGTATCCTGAGGTGGATAGAAATAAATTAATGTTTTTTGAATT TTTAACTAATGTTAAGTTTTTTTTAGCTTTTAAACAGATTAGGAAAAAAATACGAATTTTACAAAGCAATCAATTTTCGC CTTCAAATAGGGATGAATTTTTGTCCCTTCAGGTTAAAATGCTTTCCCAACATTTAAATCTTGATGAGAATAGGTGTGCC TTTTTATTAAATAAAATATATTACAGTCAAACTTTTAGCGATAAGTTTAAAAAACTCAAGCCATATCTTGGAGTTCAAGA TTTAATCTATTGGCTTAAATTTAAGGGAATAAAATTGGGTGTAATGTCAGACTTTCCTATTTTAGATCGTGTCAAAAATT TATTAGGCATTCAGGATAGTTTTTGGGATATTCTTTATTCTTCAGAAGATACTGGATATTTAAAGCCACATAAAGTACCT TTTTTAAAGGTTATTGAGGATTTAAATTTAAGTAGTAATAATATTTTGTATGTAGGAAATTCTTATGAATATGACATTTT GGGCGCTAAAAATGTTTCAATGAAAGCAGCTTTTTTTTCAAAAAAGAATATAAATTGGAAAGTAATGATTGATTTTATTT TTCATGATTATAAAGACTTAAGAGAATATATACGTTTAAATATATAG
Upstream 100 bases:
>100_bases AAAAAAGATATCCAAACTCTTATATTCATTTAGTTAGAGTTAAGGTTCCTGAAAATTTACCAATAGTACCTATACCTATA AAGGCAAATAATCAATCATC
Downstream 100 bases:
>100_bases AATATGGGTAAAATATTTTATGATAGATTTTGCTACTATTTTAGTTAACCTTTTTTTGGTTTCAATAGTTTTGTTTATTT ATAGGCAATATGACAAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEFLSLQVKMLSQHLNLDENRCA FLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLGVMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVP FLKVIEDLNLSSNNILYVGNSYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI
Sequences:
>Translated_228_residues MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEFLSLQVKMLSQHLNLDENRCA FLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLGVMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVP FLKVIEDLNLSSNNILYVGNSYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI >Mature_228_residues MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEFLSLQVKMLSQHLNLDENRCA FLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLGVMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVP FLKVIEDLNLSSNNILYVGNSYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 27072; Mature: 27072
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEF CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LSLQVKMLSQHLNLDENRCAFLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEE VMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVPFLKVIEDLNLSSNNILYVGN CCCCCCHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECC SYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI CCEEEEECCCCCEEEEEEHHCCCCCEEEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEF CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LSLQVKMLSQHLNLDENRCAFLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEE VMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVPFLKVIEDLNLSSNNILYVGN CCCCCCHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECC SYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI CCEEEEECCCCCEEEEEEHHCCCCCEEEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842 [H]