Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is ppaX [H]

Identifier: 51598765

GI number: 51598765

Start: 518100

End: 518786

Strand: Direct

Name: ppaX [H]

Synonym: BG0522

Alternate gene names: 51598765

Gene position: 518100-518786 (Clockwise)

Preceding gene: 51598764

Following gene: 51598766

Centisome position: 57.3

GC content: 25.91

Gene sequence:

>687_bases
ATGATTAAAGCTGTAATATTTGATTTAGATGGTACCTTGTATCCTGAGGTGGATAGAAATAAATTAATGTTTTTTGAATT
TTTAACTAATGTTAAGTTTTTTTTAGCTTTTAAACAGATTAGGAAAAAAATACGAATTTTACAAAGCAATCAATTTTCGC
CTTCAAATAGGGATGAATTTTTGTCCCTTCAGGTTAAAATGCTTTCCCAACATTTAAATCTTGATGAGAATAGGTGTGCC
TTTTTATTAAATAAAATATATTACAGTCAAACTTTTAGCGATAAGTTTAAAAAACTCAAGCCATATCTTGGAGTTCAAGA
TTTAATCTATTGGCTTAAATTTAAGGGAATAAAATTGGGTGTAATGTCAGACTTTCCTATTTTAGATCGTGTCAAAAATT
TATTAGGCATTCAGGATAGTTTTTGGGATATTCTTTATTCTTCAGAAGATACTGGATATTTAAAGCCACATAAAGTACCT
TTTTTAAAGGTTATTGAGGATTTAAATTTAAGTAGTAATAATATTTTGTATGTAGGAAATTCTTATGAATATGACATTTT
GGGCGCTAAAAATGTTTCAATGAAAGCAGCTTTTTTTTCAAAAAAGAATATAAATTGGAAAGTAATGATTGATTTTATTT
TTCATGATTATAAAGACTTAAGAGAATATATACGTTTAAATATATAG

Upstream 100 bases:

>100_bases
AAAAAAGATATCCAAACTCTTATATTCATTTAGTTAGAGTTAAGGTTCCTGAAAATTTACCAATAGTACCTATACCTATA
AAGGCAAATAATCAATCATC

Downstream 100 bases:

>100_bases
AATATGGGTAAAATATTTTATGATAGATTTTGCTACTATTTTAGTTAACCTTTTTTTGGTTTCAATAGTTTTGTTTATTT
ATAGGCAATATGACAAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEFLSLQVKMLSQHLNLDENRCA
FLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLGVMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVP
FLKVIEDLNLSSNNILYVGNSYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI

Sequences:

>Translated_228_residues
MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEFLSLQVKMLSQHLNLDENRCA
FLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLGVMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVP
FLKVIEDLNLSSNNILYVGNSYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI
>Mature_228_residues
MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEFLSLQVKMLSQHLNLDENRCA
FLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLGVMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVP
FLKVIEDLNLSSNNILYVGNSYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 27072; Mature: 27072

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEF
CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LSLQVKMLSQHLNLDENRCAFLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEE
VMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVPFLKVIEDLNLSSNNILYVGN
CCCCCCHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECC
SYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI
CCEEEEECCCCCEEEEEEHHCCCCCEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKAVIFDLDGTLYPEVDRNKLMFFEFLTNVKFFLAFKQIRKKIRILQSNQFSPSNRDEF
CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LSLQVKMLSQHLNLDENRCAFLLNKIYYSQTFSDKFKKLKPYLGVQDLIYWLKFKGIKLG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEE
VMSDFPILDRVKNLLGIQDSFWDILYSSEDTGYLKPHKVPFLKVIEDLNLSSNNILYVGN
CCCCCCHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECC
SYEYDILGAKNVSMKAAFFSKKNINWKVMIDFIFHDYKDLREYIRLNI
CCEEEEECCCCCEEEEEEHHCCCCCEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]