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The map label for this gene is ymdB [H]

Identifier: 51598760

GI number: 51598760

Start: 513156

End: 513944

Strand: Direct

Name: ymdB [H]

Synonym: BG0517

Alternate gene names: 51598760

Gene position: 513156-513944 (Clockwise)

Preceding gene: 51598759

Following gene: 51598761

Centisome position: 56.75

GC content: 28.64

Gene sequence:

>789_bases
ATGCAAGATAGCACTATTAAAACCTTGATAATTGGAGATATAGTAGGCGAGAGTGGATTAAAAAAAGTTTTTTTTAATCT
TAAAAATATTAAGAACAAATATAGAATAGATTTGGTAATTGCTAATGGAGAAAATTCGTCAAACGGTTTTGGAATAACTC
CAGAAATAGCAAATAATCTTTTTAGATCGGGTGTTAATGTTATTACTACTGGCAATCATGTGTATTCTAATTACAAAATA
AATGACTATCTCAATAAGCAAACATATATTTTAAGGCCAAATAATTTTTCAGATTTGTTAGATGGTCATGGTTATTGTTT
TTTAACTATTAGAGATGAAAAGGTTGCTGTGATTAATGTTCAAGGGGTTTTAAATATGAATTTTATTGTTAAGAATCCTT
TTAATAATACAAAAAAATTGGTCAATATGCTCAGCAACAAGGTTAGAACTATTTTTGTAGATTTCCATGCTGAGAGTAAT
TATGAAAAAGAAAGTTTTGGATATTTTTTAAATGGTTTTGTAACAGGTGTAGTTGGTACTCATACCCATGTTATGACTAA
AGATGAAAGAATATTGTCAAAAGGGACAGCCTATATTAGTGATGTTGGAATGACAGGTGGATTAAATTCTGTAATAGGAT
TTAATCCTGATATTTCTCTTAAAGGCTTACTTAAATATACTCCTTTAAGAGCTGAAGTTGTAGAAGATAACATAATTTTA
CGGGGAGTTATTATTACTTCTAATCTAAAGACAGGCCGCGCTTTAAAAATTGAAAGGATTCAGAAATAA

Upstream 100 bases:

>100_bases
ATTTTACTTGCAAGAGACATTGCTAAGAAGATAGAAGCTGAAATGAGATATCCTGGGAAAATTAAAGTTACAATTATTCG
CGAAACTAGAGTTATTGAAT

Downstream 100 bases:

>100_bases
TTTATTAAACATACTTTGTAAAAGGTATCCAAAAAAAACACGAGAAGAATTAATGATTTTGATTTTAACAGGGAATGTAT
ATGTAAATTCTCATAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MQDSTIKTLIIGDIVGESGLKKVFFNLKNIKNKYRIDLVIANGENSSNGFGITPEIANNLFRSGVNVITTGNHVYSNYKI
NDYLNKQTYILRPNNFSDLLDGHGYCFLTIRDEKVAVINVQGVLNMNFIVKNPFNNTKKLVNMLSNKVRTIFVDFHAESN
YEKESFGYFLNGFVTGVVGTHTHVMTKDERILSKGTAYISDVGMTGGLNSVIGFNPDISLKGLLKYTPLRAEVVEDNIIL
RGVIITSNLKTGRALKIERIQK

Sequences:

>Translated_262_residues
MQDSTIKTLIIGDIVGESGLKKVFFNLKNIKNKYRIDLVIANGENSSNGFGITPEIANNLFRSGVNVITTGNHVYSNYKI
NDYLNKQTYILRPNNFSDLLDGHGYCFLTIRDEKVAVINVQGVLNMNFIVKNPFNNTKKLVNMLSNKVRTIFVDFHAESN
YEKESFGYFLNGFVTGVVGTHTHVMTKDERILSKGTAYISDVGMTGGLNSVIGFNPDISLKGLLKYTPLRAEVVEDNIIL
RGVIITSNLKTGRALKIERIQK
>Mature_262_residues
MQDSTIKTLIIGDIVGESGLKKVFFNLKNIKNKYRIDLVIANGENSSNGFGITPEIANNLFRSGVNVITTGNHVYSNYKI
NDYLNKQTYILRPNNFSDLLDGHGYCFLTIRDEKVAVINVQGVLNMNFIVKNPFNNTKKLVNMLSNKVRTIFVDFHAESN
YEKESFGYFLNGFVTGVVGTHTHVMTKDERILSKGTAYISDVGMTGGLNSVIGFNPDISLKGLLKYTPLRAEVVEDNIIL
RGVIITSNLKTGRALKIERIQK

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29278; Mature: 29278

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSTIKTLIIGDIVGESGLKKVFFNLKNIKNKYRIDLVIANGENSSNGFGITPEIANNL
CCCCEEEEEEEEEHHCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEECHHHHHHH
FRSGVNVITTGNHVYSNYKINDYLNKQTYILRPNNFSDLLDGHGYCFLTIRDEKVAVINV
HHCCCCEEEECCEEEECEEEHHCCCCEEEEECCCCHHHHHCCCCEEEEEEECCEEEEEEE
QGVLNMNFIVKNPFNNTKKLVNMLSNKVRTIFVDFHAESNYEKESFGYFLNGFVTGVVGT
EEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHEEEHHEEEEECC
HTHVMTKDERILSKGTAYISDVGMTGGLNSVIGFNPDISLKGLLKYTPLRAEVVEDNIIL
CEEEEECCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCEEE
RGVIITSNLKTGRALKIERIQK
EEEEEECCCCCCCEEEEEECCC
>Mature Secondary Structure
MQDSTIKTLIIGDIVGESGLKKVFFNLKNIKNKYRIDLVIANGENSSNGFGITPEIANNL
CCCCEEEEEEEEEHHCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEECHHHHHHH
FRSGVNVITTGNHVYSNYKINDYLNKQTYILRPNNFSDLLDGHGYCFLTIRDEKVAVINV
HHCCCCEEEECCEEEECEEEHHCCCCEEEEECCCCHHHHHCCCCEEEEEEECCEEEEEEE
QGVLNMNFIVKNPFNNTKKLVNMLSNKVRTIFVDFHAESNYEKESFGYFLNGFVTGVVGT
EEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHEEEHHEEEEECC
HTHVMTKDERILSKGTAYISDVGMTGGLNSVIGFNPDISLKGLLKYTPLRAEVVEDNIIL
CEEEEECCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCEEE
RGVIITSNLKTGRALKIERIQK
EEEEEECCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]