Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598718
Identifier: 51598718
GI number: 51598718
Start: 486638
End: 486937
Strand: Direct
Name: 51598718
Synonym: BG0475
Alternate gene names: NA
Gene position: 486638-486937 (Clockwise)
Preceding gene: 51598717
Following gene: 51598719
Centisome position: 53.82
GC content: 29.33
Gene sequence:
>300_bases ATGGCAGTAAATCCATTAGATTTTTTAAAAAATATGTCTAGCGTTAAGAACAATATTGACAATATTAAAAAGGAAATGTC TAAAATTACGGTTTGTGGTAAAGCTGGCAGCAATATTGTTGTTATTGAGATGGATGGCGAATTTAATGTTAAAAAAGTTT CAATTAATAAGGAATTTTTTGATGATTTAGACAATGGTGCTTTTGAACAAATGGTTAAATCTGCTTTAAATGATGCTGTC TCTAAGGTTAAAGAAGAGATAAAATTAAAAACTATGGGAGTGCTTCCCTTTGGAATGTAG
Upstream 100 bases:
>100_bases GTTTTTCAGAAAAATTTTAAAAGCCTTGAAAAGGATTTTGAAAAATTAGAAACTGTAAAAAATATTTTTGGAGCAAGTGA AGTTCTGGAGGGATAGAAAT
Downstream 100 bases:
>100_bases TTATTAATTTTGTAAAAGTTATATTTTAATTTTTTAATATAATGTTATGTGCTTTATAACTTTTAGCATTCCGTATAAAT TTAATTAATCAGGTATACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MAVNPLDFLKNMSSVKNNIDNIKKEMSKITVCGKAGSNIVVIEMDGEFNVKKVSINKEFFDDLDNGAFEQMVKSALNDAV SKVKEEIKLKTMGVLPFGM
Sequences:
>Translated_99_residues MAVNPLDFLKNMSSVKNNIDNIKKEMSKITVCGKAGSNIVVIEMDGEFNVKKVSINKEFFDDLDNGAFEQMVKSALNDAV SKVKEEIKLKTMGVLPFGM >Mature_98_residues AVNPLDFLKNMSSVKNNIDNIKKEMSKITVCGKAGSNIVVIEMDGEFNVKKVSINKEFFDDLDNGAFEQMVKSALNDAVS KVKEEIKLKTMGVLPFGM
Specific function: Unknown
COG id: COG0718
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0133 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004401 [H]
Pfam domain/function: PF02575 DUF149 [H]
EC number: NA
Molecular weight: Translated: 10961; Mature: 10830
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNPLDFLKNMSSVKNNIDNIKKEMSKITVCGKAGSNIVVIEMDGEFNVKKVSINKEFF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCHHHH DDLDNGAFEQMVKSALNDAVSKVKEEIKLKTMGVLPFGM HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AVNPLDFLKNMSSVKNNIDNIKKEMSKITVCGKAGSNIVVIEMDGEFNVKKVSINKEFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCHHHH DDLDNGAFEQMVKSALNDAVSKVKEEIKLKTMGVLPFGM HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]