Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598715
Identifier: 51598715
GI number: 51598715
Start: 482033
End: 483352
Strand: Direct
Name: 51598715
Synonym: BG0468
Alternate gene names: NA
Gene position: 482033-483352 (Clockwise)
Preceding gene: 51598714
Following gene: 51598717
Centisome position: 53.31
GC content: 26.29
Gene sequence:
>1320_bases ATGAATAACTTTAATTTTGAGAAAGCTTTAAATTTTTATAAAAATGGTGATCTTAAAAGCTCTCTTGACAATTTAGATGT TTTTGATGAAAATTTAGATTCTCTTGCACTTAAAGCTCTTATTTATTTTAAGAAAAAGGATTATAAGGCTCTTTTATATG TCTTGAATACTTATCCTGCTGTTTTGAGTGAATACAATTTTTTAGTTAAGCTTATAGATTATGGTAAAATTGAAAAAAAT AAAGAAGATTTAGGGCCTTTTGAGAGTTATAATTTGGGTGTTTTTTATTTCAATTTAAAAGAATATAAACTTGCTTTAAG TTGTTTTTTAAAAGCCAAAGAGCAAAAATCTGACTTTATACAAGCGTTAAACAATAGTGCTGTCTTATTTGAAATGTTGG GCAACAAGGACGAGGCTTTAAAATTATTTTTTAAGGCTAGAGATTTAGATCAAAATAATTCTCTTGTTAGGCTTAATATT TGGATTTTAAAAAATAGAGAATCTCTTAAAGCAGGAAGCTTTTTAGAAGTAGACAAAATTTTTTCTGATGTCAATCTTGC TCTTGTTGTTAATTATTTGATGTATTATTTCTATTTTATTGGAGAAATAAGCAGGGCAATCAGACTTTCTGAAAAATTTT TAACAGATTCTCATTATTCTAAGTATATTTGGCACAATAGGGGAACTATTTTTCATAAAATAGGCAATATGACTCAAGCT ACTACATCTTATGTTAAAGCCATTTTGAATTTTCCAAATATTTATACAATTTATAATATGCATATTGCAACAATTGAGCT TTTAAAATTTTCTCCTAAAAAGTCTATTGAGAGAATGATTGACGATTATTCCAACTTAGACTTGATATATTTGTATGCAA CTTTATTTTTTCTGAGAAATCGCGATCTTGAAGATGCCTATTTTTACATGAAAAAACTTTGCGAGCTTAATCCAGAGCCT TATTCAAAATTTTTAAAATTACTTGAGTCTAGCGAGGATATGTTAATTGAAAATCTGCTTGAAGAATTTGCAGTATCTTT AAGAGCAAATTGGCATTTAGAGTATTTATTTTTTATTGACAATTCTTTAAATTTGGGAGATCCTATTTTTATTTTTGATC ACAATATAAGGATAAATACATATATTTGGAGAATTAAAGATGAGTTTATTGAATTAAAATTTAGCAATAATGAGGAAAAA ATGGTGCAAGAGATATTACATTCAGAATGTGTTTGTCCCAAAATTGACATTTCTATTGGGGATTTCCAAAAGTTAATAGA AGCTTATAAAGAGTTTAGAATAAATTACTATTATTTGTAA
Upstream 100 bases:
>100_bases TATTATATTAGTATTGCTGCTTATAATTTGGATAAAAGTGTTAATAAGACTTCCTTTTCTAAGGAAATTTCTGTAAGGCC TATGGAGATTTTAAAAAAAT
Downstream 100 bases:
>100_bases TTTATTTAGTTGACAATAATAATATCTCTAATATAATATTTATTAATGCTGTAGGAGAGATGCCAGAGTGGCCGAATGGG GCTTCCTGCTAAGAAGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPAVLSEYNFLVKLIDYGKIEKN KEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFIQALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNI WILKNRESLKAGSFLEVDKIFSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRNRDLEDAYFYMKKLCELNPEP YSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFIDNSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEK MVQEILHSECVCPKIDISIGDFQKLIEAYKEFRINYYYL
Sequences:
>Translated_439_residues MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPAVLSEYNFLVKLIDYGKIEKN KEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFIQALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNI WILKNRESLKAGSFLEVDKIFSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRNRDLEDAYFYMKKLCELNPEP YSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFIDNSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEK MVQEILHSECVCPKIDISIGDFQKLIEAYKEFRINYYYL >Mature_439_residues MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPAVLSEYNFLVKLIDYGKIEKN KEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFIQALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNI WILKNRESLKAGSFLEVDKIFSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRNRDLEDAYFYMKKLCELNPEP YSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFIDNSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEK MVQEILHSECVCPKIDISIGDFQKLIEAYKEFRINYYYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52151; Mature: 52151
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPA CCCCCHHHHHHHHCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VLSEYNFLVKLIDYGKIEKNKEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFI HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH QALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNIWILKNRESLKAGSFLEVDKI HHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCEEHHHH FSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCEEEEHHCCCHHH TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRN HHHHHHHHHCCCCEEEEEEEHHHEEEEHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC RDLEDAYFYMKKLCELNPEPYSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFID CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEE NSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEKMVQEILHSECVCPKIDISIG CCCCCCCEEEEEECCEEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEECCCHH DFQKLIEAYKEFRINYYYL HHHHHHHHHHHCCCEEEEC >Mature Secondary Structure MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPA CCCCCHHHHHHHHCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VLSEYNFLVKLIDYGKIEKNKEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFI HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH QALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNIWILKNRESLKAGSFLEVDKI HHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCEEHHHH FSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCEEEEHHCCCHHH TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRN HHHHHHHHHCCCCEEEEEEEHHHEEEEHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC RDLEDAYFYMKKLCELNPEPYSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFID CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEE NSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEKMVQEILHSECVCPKIDISIG CCCCCCCEEEEEECCEEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEECCCHH DFQKLIEAYKEFRINYYYL HHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA