Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

Click here to switch to the map view.

The map label for this gene is 51598715

Identifier: 51598715

GI number: 51598715

Start: 482033

End: 483352

Strand: Direct

Name: 51598715

Synonym: BG0468

Alternate gene names: NA

Gene position: 482033-483352 (Clockwise)

Preceding gene: 51598714

Following gene: 51598717

Centisome position: 53.31

GC content: 26.29

Gene sequence:

>1320_bases
ATGAATAACTTTAATTTTGAGAAAGCTTTAAATTTTTATAAAAATGGTGATCTTAAAAGCTCTCTTGACAATTTAGATGT
TTTTGATGAAAATTTAGATTCTCTTGCACTTAAAGCTCTTATTTATTTTAAGAAAAAGGATTATAAGGCTCTTTTATATG
TCTTGAATACTTATCCTGCTGTTTTGAGTGAATACAATTTTTTAGTTAAGCTTATAGATTATGGTAAAATTGAAAAAAAT
AAAGAAGATTTAGGGCCTTTTGAGAGTTATAATTTGGGTGTTTTTTATTTCAATTTAAAAGAATATAAACTTGCTTTAAG
TTGTTTTTTAAAAGCCAAAGAGCAAAAATCTGACTTTATACAAGCGTTAAACAATAGTGCTGTCTTATTTGAAATGTTGG
GCAACAAGGACGAGGCTTTAAAATTATTTTTTAAGGCTAGAGATTTAGATCAAAATAATTCTCTTGTTAGGCTTAATATT
TGGATTTTAAAAAATAGAGAATCTCTTAAAGCAGGAAGCTTTTTAGAAGTAGACAAAATTTTTTCTGATGTCAATCTTGC
TCTTGTTGTTAATTATTTGATGTATTATTTCTATTTTATTGGAGAAATAAGCAGGGCAATCAGACTTTCTGAAAAATTTT
TAACAGATTCTCATTATTCTAAGTATATTTGGCACAATAGGGGAACTATTTTTCATAAAATAGGCAATATGACTCAAGCT
ACTACATCTTATGTTAAAGCCATTTTGAATTTTCCAAATATTTATACAATTTATAATATGCATATTGCAACAATTGAGCT
TTTAAAATTTTCTCCTAAAAAGTCTATTGAGAGAATGATTGACGATTATTCCAACTTAGACTTGATATATTTGTATGCAA
CTTTATTTTTTCTGAGAAATCGCGATCTTGAAGATGCCTATTTTTACATGAAAAAACTTTGCGAGCTTAATCCAGAGCCT
TATTCAAAATTTTTAAAATTACTTGAGTCTAGCGAGGATATGTTAATTGAAAATCTGCTTGAAGAATTTGCAGTATCTTT
AAGAGCAAATTGGCATTTAGAGTATTTATTTTTTATTGACAATTCTTTAAATTTGGGAGATCCTATTTTTATTTTTGATC
ACAATATAAGGATAAATACATATATTTGGAGAATTAAAGATGAGTTTATTGAATTAAAATTTAGCAATAATGAGGAAAAA
ATGGTGCAAGAGATATTACATTCAGAATGTGTTTGTCCCAAAATTGACATTTCTATTGGGGATTTCCAAAAGTTAATAGA
AGCTTATAAAGAGTTTAGAATAAATTACTATTATTTGTAA

Upstream 100 bases:

>100_bases
TATTATATTAGTATTGCTGCTTATAATTTGGATAAAAGTGTTAATAAGACTTCCTTTTCTAAGGAAATTTCTGTAAGGCC
TATGGAGATTTTAAAAAAAT

Downstream 100 bases:

>100_bases
TTTATTTAGTTGACAATAATAATATCTCTAATATAATATTTATTAATGCTGTAGGAGAGATGCCAGAGTGGCCGAATGGG
GCTTCCTGCTAAGAAGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPAVLSEYNFLVKLIDYGKIEKN
KEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFIQALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNI
WILKNRESLKAGSFLEVDKIFSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA
TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRNRDLEDAYFYMKKLCELNPEP
YSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFIDNSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEK
MVQEILHSECVCPKIDISIGDFQKLIEAYKEFRINYYYL

Sequences:

>Translated_439_residues
MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPAVLSEYNFLVKLIDYGKIEKN
KEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFIQALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNI
WILKNRESLKAGSFLEVDKIFSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA
TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRNRDLEDAYFYMKKLCELNPEP
YSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFIDNSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEK
MVQEILHSECVCPKIDISIGDFQKLIEAYKEFRINYYYL
>Mature_439_residues
MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPAVLSEYNFLVKLIDYGKIEKN
KEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFIQALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNI
WILKNRESLKAGSFLEVDKIFSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA
TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRNRDLEDAYFYMKKLCELNPEP
YSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFIDNSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEK
MVQEILHSECVCPKIDISIGDFQKLIEAYKEFRINYYYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52151; Mature: 52151

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPA
CCCCCHHHHHHHHCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VLSEYNFLVKLIDYGKIEKNKEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFI
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
QALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNIWILKNRESLKAGSFLEVDKI
HHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCEEHHHH
FSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCEEEEHHCCCHHH
TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRN
HHHHHHHHHCCCCEEEEEEEHHHEEEEHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC
RDLEDAYFYMKKLCELNPEPYSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFID
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
NSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEKMVQEILHSECVCPKIDISIG
CCCCCCCEEEEEECCEEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEECCCHH
DFQKLIEAYKEFRINYYYL
HHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MNNFNFEKALNFYKNGDLKSSLDNLDVFDENLDSLALKALIYFKKKDYKALLYVLNTYPA
CCCCCHHHHHHHHCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VLSEYNFLVKLIDYGKIEKNKEDLGPFESYNLGVFYFNLKEYKLALSCFLKAKEQKSDFI
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
QALNNSAVLFEMLGNKDEALKLFFKARDLDQNNSLVRLNIWILKNRESLKAGSFLEVDKI
HHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCEEHHHH
FSDVNLALVVNYLMYYFYFIGEISRAIRLSEKFLTDSHYSKYIWHNRGTIFHKIGNMTQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCEEEEHHCCCHHH
TTSYVKAILNFPNIYTIYNMHIATIELLKFSPKKSIERMIDDYSNLDLIYLYATLFFLRN
HHHHHHHHHCCCCEEEEEEEHHHEEEEHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC
RDLEDAYFYMKKLCELNPEPYSKFLKLLESSEDMLIENLLEEFAVSLRANWHLEYLFFID
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
NSLNLGDPIFIFDHNIRINTYIWRIKDEFIELKFSNNEEKMVQEILHSECVCPKIDISIG
CCCCCCCEEEEEECCEEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEECCCHH
DFQKLIEAYKEFRINYYYL
HHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA