Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is yclO [H]
Identifier: 51598147
GI number: 51598147
Start: 4612818
End: 4613825
Strand: Direct
Name: yclO [H]
Synonym: YPTB3859
Alternate gene names: 51598147
Gene position: 4612818-4613825 (Clockwise)
Preceding gene: 51598146
Following gene: 51598148
Centisome position: 97.22
GC content: 46.23
Gene sequence:
>1008_bases ATGCGGGCTGAGGAGTACTCTGCAAAAAACACGCTATTCCAAGGCATAAATAAAGCGTTAACTTTGCCAGCAAAGCGGTT ATTGCTACTGAGCATCATCGCTCTCGGTGCGATGATTATTTTCATGACAATCAATCTGAGTGGCAATATTCAGTATATTC TCGTTCATCGAGGCCTTATTTTAGCCACTATGCTGTTGGTCGCTTTCGCATCCGGTGTGGCTACGGTCTTATTTCAAACG GTAACCAATAATCGTATTTTAACGCCATCAGTCATGGGGCTTGAGGCGCTATTTATTCTGATCCAGACGATGTTGATATT TTTTATTGACGCCAATGGGTTCCGCGCATTAGGTATCACCGGTAAATTTCTCTGTGAATCCGCATTACTGTTGCTGTTCT CCGTTTTCCTTTACCGTTGGTTACTGTCTGGTGTAGGTGTCAATCTGCACAAAGTCCTTTTGGTCGGGTTAGTTTGTGGC ACACTGTTTCGCAGTATCTCTAACCTCATGCAGCGTCTTCTTTCTCCCGGTGAATTTGCCATCCTTCAGGGCCGGATCTT CGCTACGTTTACCCGCGCCGCACCAGAAATTATTGCCGTCTCTGCTGGGATCATCGTAATGGTGGGCGTTGTTATTTGGC GTCAGCGTCATTGCCTTGATGTTATTTCTCTTGGCAGAAATACCGCGATTAACCTTGGTGTCGCGTATCAGAAAAAAATA ACCGTTATCCTCCTGTTGGTCTCACTACTGGTCGCCATATCAACCGCATTGGTGGGGCCGCTGACCTTCTTAGGGTTACT TATTGCGAACCTGGCTTATCCGATTGTGGGCTCATACCGACATCAATATTTACTACCAGGGGTTTTCCTACTGGGGGTGA TTACACTGGTCGGTGGGCAATTGATCCTTGAACGTGTGCTGAATATGGCGGGAACACTGTCCGTCGTTATTGAGTTTGTT GGCGGCGCACTGTTTATTTATCTTTTAATAAAAAAGGCTCCCGTGTGA
Upstream 100 bases:
>100_bases GGCCGATTAATCAGTTACCCTTTTGAAATCCCTGCCAGTGTTATTCTGGGCGTTATTGGCGCACTCGTTTTCCTGTTATT AATTGTTAGGACAAAACGTC
Downstream 100 bases:
>100_bases TTGAAATAAATGATGTTAATAAAAAATACCAACAGACAACGGTACTCAATGAAATCAATGAGCGCATTCCCTCTGGTGGT ATTACCTCAATCATTGGGCC
Product: ABC iron siderophore transporter, permease subunit
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLILATMLLVAFASGVATVLFQT VTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGITGKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCG TLFRSISNLMQRLLSPGEFAILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVISLGRNTAINLGVAYQKKI TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQLILERVLNMAGTLSVVIEFV GGALFIYLLIKKAPV
Sequences:
>Translated_335_residues MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLILATMLLVAFASGVATVLFQT VTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGITGKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCG TLFRSISNLMQRLLSPGEFAILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVISLGRNTAINLGVAYQKKI TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQLILERVLNMAGTLSVVIEFV GGALFIYLLIKKAPV >Mature_335_residues MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLILATMLLVAFASGVATVLFQT VTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGITGKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCG TLFRSISNLMQRLLSPGEFAILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVISLGRNTAINLGVAYQKKI TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQLILERVLNMAGTLSVVIEFV GGALFIYLLIKKAPV
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG4605
COG function: function code P; ABC-type enterochelin transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 36325; Mature: 36325
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHH LATMLLVAFASGVATVLFQTVTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGIT HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC GKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCGTLFRSISNLMQRLLSPGEFA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVISLGRNTAINLGVAYQKKI EEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHH TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILERVLNMAGTLSVVIEFVGGALFIYLLIKKAPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHH LATMLLVAFASGVATVLFQTVTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGIT HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC GKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCGTLFRSISNLMQRLLSPGEFA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVISLGRNTAINLGVAYQKKI EEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHH TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILERVLNMAGTLSVVIEFVGGALFIYLLIKKAPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]