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The map label for this gene is yclN [H]

Identifier: 51598146

GI number: 51598146

Start: 4611869

End: 4612828

Strand: Direct

Name: yclN [H]

Synonym: YPTB3858

Alternate gene names: 51598146

Gene position: 4611869-4612828 (Clockwise)

Preceding gene: 51598145

Following gene: 51598147

Centisome position: 97.2

GC content: 49.79

Gene sequence:

>960_bases
ATGAAAAATTTAAGCTTTGTCGCAGGCCTGGTGATCCTACTGGGCCTGATGATATGCAGCCTATTCATCGGGGCCGGGCA
TGTTACGTTCGCTAATCTCTGGTCGGATCCCGATATGCGCGACATCTTCTTCATCAGTCGTGTGCCGCGAACGCTGGCAT
TGGTTCTGGCTGGCAGTGCCATGAGCGTTTCCGGGCTGATTATGCAGATGCTGACACAGAATCGCTTCGTTGAGCCCTCG
ATTGCTGGTACCACACAATCGGCCAGTCTTGGCTTATTGTTGGTGATGGTTTTCAGTCCATCAGCCTCGGTGATGATCAA
GATGCTAGTGGCCACGTTATTCGCGATGGGTGGCACCGTCCTGTTCATGATGTTATTGGCACGCATGAGAATGAAATCTG
CGCTGATGGTGCCACTGACCGGCATTATGTTAGGGGCAGTTTTTAGTGCCGTAACCACATTCCTGGCGATGGAATTCGAC
CTATTACAGTCGTTAGGCAGTTGGGAGTCCGGTGATTTTTCTGGTGTATTACAGGGCCGCTATGAATTGCTGTGGATTGT
GGGCGTCCTGACGCTGGTAGCGTGTTTTATCGCTGACCGCTTCACGGTTGCGGGTATGGGCCAGGATTTCTCGGTCAATG
TCGGCTTGAATTATCAAAGAGTTATGTTGATTGGGATGTCCATCATTGCCATCATCAGTGGCGTCGTGGTAGTCGTGATT
GGTGTGCTGCCTTTTCTTGGTTTGATTATCCCTAATATTGTTAGTATGGCGATGGGCGATAATCTGCGCCGAACCATACC
TTGGGTTGGCCTTTGTGGTGGCGGCTTGGTTGTATTATGCGACATTATTGGCCGATTAATCAGTTACCCTTTTGAAATCC
CTGCCAGTGTTATTCTGGGCGTTATTGGCGCACTCGTTTTCCTGTTATTAATTGTTAGGACAAAACGTCATGCGGGCTGA

Upstream 100 bases:

>100_bases
CTCACTCTATATTGCCGGGGGTGTGCAAAGTTATACACAACTGATGAATAAGGTGAGCGCAATACTGGATAAGCCAGTAT
CAGAGCAGTAACTTTCATCC

Downstream 100 bases:

>100_bases
GGAGTACTCTGCAAAAAACACGCTATTCCAAGGCATAAATAAAGCGTTAACTTTGCCAGCAAAGCGGTTATTGCTACTGA
GCATCATCGCTCTCGGTGCG

Product: ABC iron siderophore transporter, permease subunit

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSAMSVSGLIMQMLTQNRFVEPS
IAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTVLFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFD
LLQSLGSWESGDFSGVLQGRYELLWIVGVLTLVACFIADRFTVAGMGQDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILGVIGALVFLLLIVRTKRHAG

Sequences:

>Translated_319_residues
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSAMSVSGLIMQMLTQNRFVEPS
IAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTVLFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFD
LLQSLGSWESGDFSGVLQGRYELLWIVGVLTLVACFIADRFTVAGMGQDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILGVIGALVFLLLIVRTKRHAG
>Mature_319_residues
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSAMSVSGLIMQMLTQNRFVEPS
IAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTVLFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFD
LLQSLGSWESGDFSGVLQGRYELLWIVGVLTLVACFIADRFTVAGMGQDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILGVIGALVFLLLIVRTKRHAG

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=313, Percent_Identity=26.517571884984, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790741, Length=279, Percent_Identity=26.5232974910394, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786347, Length=288, Percent_Identity=28.125, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788004, Length=291, Percent_Identity=28.5223367697594, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786805, Length=279, Percent_Identity=27.2401433691756, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34119; Mature: 34119

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH
MSVSGLIMQMLTQNRFVEPSIAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFDLLQSLGSWESGDFSGVLQGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YELLWIVGVLTLVACFIADRFTVAGMGQDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
HHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILG
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHH
VIGALVFLLLIVRTKRHAG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNLSFVAGLVILLGLMICSLFIGAGHVTFANLWSDPDMRDIFFISRVPRTLALVLAGSA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH
MSVSGLIMQMLTQNRFVEPSIAGTTQSASLGLLLVMVFSPSASVMIKMLVATLFAMGGTV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LFMMLLARMRMKSALMVPLTGIMLGAVFSAVTTFLAMEFDLLQSLGSWESGDFSGVLQGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YELLWIVGVLTLVACFIADRFTVAGMGQDFSVNVGLNYQRVMLIGMSIIAIISGVVVVVI
HHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
GVLPFLGLIIPNIVSMAMGDNLRRTIPWVGLCGGGLVVLCDIIGRLISYPFEIPASVILG
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHH
VIGALVFLLLIVRTKRHAG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]