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The map label for this gene is yrdA [H]

Identifier: 51597949

GI number: 51597949

Start: 4373446

End: 4373988

Strand: Direct

Name: yrdA [H]

Synonym: YPTB3659

Alternate gene names: 51597949

Gene position: 4373446-4373988 (Clockwise)

Preceding gene: 51597944

Following gene: 51597955

Centisome position: 92.18

GC content: 43.65

Gene sequence:

>543_bases
ATGTGCGACTCTATCCGCCCTTATCTTCATCATTCACCGACTTTAGGTAAACGAGTCATGATCGATAGATCGAGTGTGAT
CATTGGCAATGTTATTTTAGGTGATGATGTCAGTGTCTGGCCATTAGTCGCCATTCGTGGCGATGTTAATCAAGTCATCA
TTGGGGCACGTTCAAATATCCAAGACGGTAGTGTGCTACATGTTACCCACCAATCTGAGCATAATCCTGAAGGGTATCCG
TTAATCATTGGTGAAGACGTGACTATTGGTCATAAAGCCATGCTACACGGCTGTACCATTGGTAACAGAGTATTAGTGGG
TATGGGATCTATTCTATTAGATGGAACAATAATAGAAGATGATGTAATGATTGGTGCAGGTAGCCTCATTGCTCCAGGTA
AACGCTTAGTTAGTGGCTATCTTTATGTGGGCAGCCCAGCGAAGCAAATACGCCCATTAACACCCTTAGAGTTAGAAGGC
CTGCTTTACTCTGCTGGCAACTACGTTCGCTGGAAAGATGACTATCTGGCAGAGTCTAAATAA

Upstream 100 bases:

>100_bases
CGTTGCATTTTAACGACGATCCTAATGGTCAGTTGGTTGTAATTCCATCAGCAAAAGCTAGTATTGCCGGTAAACGTGAT
CTTATTAAGAGGCTATTATT

Downstream 100 bases:

>100_bases
CCGAATGATATGCAGGGCGAAATATAACCTCCCTGCATTCATTGGTGTGTGCTTCTATTTACCTAACTCACTGCGTAGCT
GGGCTAATACTGGCGTAATT

Product: transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MCDSIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRGDVNQVIIGARSNIQDGSVLHVTHQSEHNPEGYP
LIIGEDVTIGHKAMLHGCTIGNRVLVGMGSILLDGTIIEDDVMIGAGSLIAPGKRLVSGYLYVGSPAKQIRPLTPLELEG
LLYSAGNYVRWKDDYLAESK

Sequences:

>Translated_180_residues
MCDSIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRGDVNQVIIGARSNIQDGSVLHVTHQSEHNPEGYP
LIIGEDVTIGHKAMLHGCTIGNRVLVGMGSILLDGTIIEDDVMIGAGSLIAPGKRLVSGYLYVGSPAKQIRPLTPLELEG
LLYSAGNYVRWKDDYLAESK
>Mature_180_residues
MCDSIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRGDVNQVIIGARSNIQDGSVLHVTHQSEHNPEGYP
LIIGEDVTIGHKAMLHGCTIGNRVLVGMGSILLDGTIIEDDVMIGAGSLIAPGKRLVSGYLYVGSPAKQIRPLTPLELEG
LLYSAGNYVRWKDDYLAESK

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=178, Percent_Identity=71.3483146067416, Blast_Score=259, Evalue=6e-71,
Organism=Escherichia coli, GI1787667, Length=150, Percent_Identity=37.3333333333333, Blast_Score=107, Evalue=4e-25,
Organism=Escherichia coli, GI87081681, Length=146, Percent_Identity=36.986301369863, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19464; Mature: 19464

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDSIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRGDVNQVIIGARSNI
CCCCCCCHHCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCC
QDGSVLHVTHQSEHNPEGYPLIIGEDVTIGHKAMLHGCTIGNRVLVGMGSILLDGTIIED
CCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHEEEECCCCCEEEEECCCEEECCEEEEC
DVMIGAGSLIAPGKRLVSGYLYVGSPAKQIRPLTPLELEGLLYSAGNYVRWKDDYLAESK
CEEEECCCEECCCHHHEEEEEEECCCHHHCCCCCCEEECEEEECCCCEEEECCCCCCCCC
>Mature Secondary Structure
MCDSIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRGDVNQVIIGARSNI
CCCCCCCHHCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCC
QDGSVLHVTHQSEHNPEGYPLIIGEDVTIGHKAMLHGCTIGNRVLVGMGSILLDGTIIED
CCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHEEEECCCCCEEEEECCCEEECCEEEEC
DVMIGAGSLIAPGKRLVSGYLYVGSPAKQIRPLTPLELEGLLYSAGNYVRWKDDYLAESK
CEEEECCCEECCCHHHEEEEEEECCCHHHCCCCCCEEECEEEECCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]