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The map label for this gene is 51597438

Identifier: 51597438

GI number: 51597438

Start: 3686787

End: 3687149

Strand: Reverse

Name: 51597438

Synonym: YPTB3125

Alternate gene names: NA

Gene position: 3687149-3686787 (Counterclockwise)

Preceding gene: 51597439

Following gene: 51597437

Centisome position: 77.71

GC content: 45.18

Gene sequence:

>363_bases
ATGGCAAAACTACAATACATTCATGATGAAGCAGGAAAGCCTCAGTTTGTGGTTTTACCCGTTGCCGAATACCAGCAGCT
TATCTCTAATGCAAAGTATGAGGATATTCCCTATGTTGCTGATAACGATGATGATCAGACGATCCCGAATGAAGTTGTTC
AAATCATGGTAAACGATGGTGTCAGTTTGCTGGCTGCATGGCGTATCTACCGTGGTTTTTCGCAATATGAAATAGCAGAA
CTGCTTGGCACCACCCAATCTGCTGTATCCCAATGGGAAGCCGTAGATTCTCGCCCACAGAAGAAAACCAGAGAGAAGCT
AGCGGTCATTTATAAGTGCCGGGCGGCGCAGATGATTTTGTGA

Upstream 100 bases:

>100_bases
TCCAGGAAGTTAAACGTAGAACCACGGCAACCTATTAGGTTAGCTCAGTATATTTTCCCTCAAAGGCATGGTGTTATTTT
TCTAAACTAAGGTGAATAAG

Downstream 100 bases:

>100_bases
GTGCTAAAGATAAAAATTAGAGGCTTTGGTGACCTCAATAACCATAACTAATTAATAATAGTTAAATCACGCTCACAAAC
AAACCTAATAGGTTAATGAC

Product: DNA binding protein

Products: NA

Alternate protein names: Transcriptional Regulator; Xin-Antitoxin System Antitoxin Component Xre Family; Helix-Turn-Helix Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMVNDGVSLLAAWRIYRGFSQYEIAE
LLGTTQSAVSQWEAVDSRPQKKTREKLAVIYKCRAAQMIL

Sequences:

>Translated_120_residues
MAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMVNDGVSLLAAWRIYRGFSQYEIAE
LLGTTQSAVSQWEAVDSRPQKKTREKLAVIYKCRAAQMIL
>Mature_119_residues
AKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMVNDGVSLLAAWRIYRGFSQYEIAEL
LGTTQSAVSQWEAVDSRPQKKTREKLAVIYKCRAAQMIL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13651; Mature: 13519

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMVNDG
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
VSLLAAWRIYRGFSQYEIAELLGTTQSAVSQWEAVDSRPQKKTREKLAVIYKCRAAQMIL
HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMVNDG
CCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
VSLLAAWRIYRGFSQYEIAELLGTTQSAVSQWEAVDSRPQKKTREKLAVIYKCRAAQMIL
HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA