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The map label for this gene is mqsR [H]

Identifier: 51597437

GI number: 51597437

Start: 3686327

End: 3686644

Strand: Reverse

Name: mqsR [H]

Synonym: YPTB3124

Alternate gene names: 51597437

Gene position: 3686644-3686327 (Counterclockwise)

Preceding gene: 51597438

Following gene: 51597436

Centisome position: 77.7

GC content: 39.31

Gene sequence:

>318_bases
TTGCTCAAGGATGGCAATGAAATGGAGAAACGGACTCCGCATACTCGTTTATTAAAAGTAAAAGAATTGGTATTGAAGGG
GAATATTAAAACGACACGAACTGCCAGAGATGGGGCTGAGGAACTGGGACTGAGTTTTAGAGATATGTGTGATGCAGTTT
CCGAACTGATTAGCGCCGATTTTTATAAAAGTATGACGACACATCAAGATCATACCATTTGGCAGGATGTTTACCGTCCT
ATGCTTTCTTGCGGTAGAGTTTATTTGAAAATCACGGTTATCGATGATGTTTTGATTGTCTCGTTTAAGGAGATTTAA

Upstream 100 bases:

>100_bases
CATAACTAATTAATAATAGTTAAATCACGCTCACAAACAAACCTAATAGGTTAATGACTTGCTATAAATAACCTACTAGG
TTATATTTATTAAGTGGAAA

Downstream 100 bases:

>100_bases
TGATGAAATGTCCAGTTTGTGGCGGTGTAGAATTAATCCACGAAGCGCGTGACGTTCCCTTTACCTATAAAGGGCGTAAG
TTCATCGTCGAAGGCGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLKDGNEMEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISADFYKSMTTHQDHTIWQDVYRP
MLSCGRVYLKITVIDDVLIVSFKEI

Sequences:

>Translated_105_residues
MLKDGNEMEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISADFYKSMTTHQDHTIWQDVYRP
MLSCGRVYLKITVIDDVLIVSFKEI
>Mature_105_residues
MLKDGNEMEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISADFYKSMTTHQDHTIWQDVYRP
MLSCGRVYLKITVIDDVLIVSFKEI

Specific function: AI-2 controlled regulator that controls biofilm formation. Controls biofilm formation by inducing motility through the activation of qseBC and csrA. This leads to the activation of the master flagellum regulon flhDC, of fliA, motA and crl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789399, Length=97, Percent_Identity=68.0412371134021, Blast_Score=136, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12106; Mature: 12106

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDGNEMEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISAD
CCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHCCHHHHCCCHHHHHHHHHHHHHHH
FYKSMTTHQDHTIWQDVYRPMLSCGRVYLKITVIDDVLIVSFKEI
HHHHHCCCCCHHHHHHHHHHHHHCCHHEEEEEEHHHHHHHHHHCC
>Mature Secondary Structure
MLKDGNEMEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISAD
CCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHCCHHHHCCCHHHHHHHHHHHHHHH
FYKSMTTHQDHTIWQDVYRPMLSCGRVYLKITVIDDVLIVSFKEI
HHHHHCCCCCHHHHHHHHHHHHHCCHHEEEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]