Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
---|---|
Accession | NC_006155 |
Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is fxsA
Identifier: 51594755
GI number: 51594755
Start: 481985
End: 482563
Strand: Direct
Name: fxsA
Synonym: YPTB0403
Alternate gene names: 51594755
Gene position: 481985-482563 (Clockwise)
Preceding gene: 51594750
Following gene: 51594756
Centisome position: 10.16
GC content: 46.11
Gene sequence:
>579_bases GTGCGTTGGTTACCGTTTGCGCTGATATTTTTATTGGCATATATAGAAATATCGATATTCATCAAGGTTGCCGCAGTATT AGGGGTACCAATCACCCTGCTGCTGGTGATCATTAGCTCCTGTGTAGGCATCTCACTGGTACGTAATCAGGGCATAAAAA CCTTTATCCAGATGCAACAAAAGCTGGCGGCGGGTGAGAGCCCGGCGGCTGAGATGATCAAAAGTGTTTCACTGGTCTTG GCCGGTATTTTGTTGCTGATCCCCGGCTTCTTCACTGATTTCCTTGGCCTGTTGTTGCTATTGCCTTGGGTTCAAAAAAC ATTAACGCTGAAATTGATGCCGCACTTGAACATTTATCGTGGCGGTAGCTTTGGCGGTGCTGGCTTTGGTAATGGTGGCT TTGGTAACGATAGCTTTGGTAACCGCCATGGTTCTGGCCCAATGAGTGGCGGGGATACTTTTGATGGCGAGTTTCAGCGT AAAGACGATGACCGTTTTACGGTGGAGCACCGTCCGGATAAAAATGAGCAAGTAGCAAATAGTCGTTCTAACGATGATAG TTTTAAAGATGATAAATAA
Upstream 100 bases:
>100_bases GCCGTATCAGTACCTACAGGGTCAAGGTTTTCATGGTATCTGTCAGACAGGCTAATAGCCTGATGAGGGGTACTGAATGA TTAAAAATAAGGAGAATACG
Downstream 100 bases:
>100_bases AAAGGAGGGTAATTTTCTAATAGCCTGTTTATTAATCATAAATTTATAAAGTAAATCATAGTGCTTTCTTTGTACCGTAG GCGATAGGCGGATAAAATTA
Product: FxsA
Products: NA
Alternate protein names: Suppressor of F exclusion of phage T7 [H]
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRWLPFALIFLLAYIEISIFIKVAAVLGVPITLLLVIISSCVGISLVRNQGIKTFIQMQQKLAAGESPAAEMIKSVSLVL AGILLLIPGFFTDFLGLLLLLPWVQKTLTLKLMPHLNIYRGGSFGGAGFGNGGFGNDSFGNRHGSGPMSGGDTFDGEFQR KDDDRFTVEHRPDKNEQVANSRSNDDSFKDDK
Sequences:
>Translated_192_residues MRWLPFALIFLLAYIEISIFIKVAAVLGVPITLLLVIISSCVGISLVRNQGIKTFIQMQQKLAAGESPAAEMIKSVSLVL AGILLLIPGFFTDFLGLLLLLPWVQKTLTLKLMPHLNIYRGGSFGGAGFGNGGFGNDSFGNRHGSGPMSGGDTFDGEFQR KDDDRFTVEHRPDKNEQVANSRSNDDSFKDDK >Mature_192_residues MRWLPFALIFLLAYIEISIFIKVAAVLGVPITLLLVIISSCVGISLVRNQGIKTFIQMQQKLAAGESPAAEMIKSVSLVL AGILLLIPGFFTDFLGLLLLLPWVQKTLTLKLMPHLNIYRGGSFGGAGFGNGGFGNDSFGNRHGSGPMSGGDTFDGEFQR KDDDRFTVEHRPDKNEQVANSRSNDDSFKDDK
Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family [H]
Homologues:
Organism=Escherichia coli, GI87082376, Length=176, Percent_Identity=60.2272727272727, Blast_Score=158, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007313 [H]
Pfam domain/function: PF04186 FxsA [H]
EC number: NA
Molecular weight: Translated: 20950; Mature: 20950
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLPFALIFLLAYIEISIFIKVAAVLGVPITLLLVIISSCVGISLVRNQGIKTFIQMQQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KLAAGESPAAEMIKSVSLVLAGILLLIPGFFTDFLGLLLLLPWVQKTLTLKLMPHLNIYR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE GGSFGGAGFGNGGFGNDSFGNRHGSGPMSGGDTFDGEFQRKDDDRFTVEHRPDKNEQVAN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHC SRSNDDSFKDDK CCCCCCCCCCCC >Mature Secondary Structure MRWLPFALIFLLAYIEISIFIKVAAVLGVPITLLLVIISSCVGISLVRNQGIKTFIQMQQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KLAAGESPAAEMIKSVSLVLAGILLLIPGFFTDFLGLLLLLPWVQKTLTLKLMPHLNIYR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE GGSFGGAGFGNGGFGNDSFGNRHGSGPMSGGDTFDGEFQRKDDDRFTVEHRPDKNEQVAN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHC SRSNDDSFKDDK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7846149 [H]