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The map label for this gene is ydbC [H]

Identifier: 50842041

GI number: 50842041

Start: 614727

End: 615590

Strand: Reverse

Name: ydbC [H]

Synonym: PPA0555

Alternate gene names: 50842041

Gene position: 615590-614727 (Counterclockwise)

Preceding gene: 50842042

Following gene: 50842038

Centisome position: 24.04

GC content: 61.34

Gene sequence:

>864_bases
ATGAAGTACCGCCAGATCGGACCATTCCGTACGTCAGCAATTGCCTACGGCTCGATGCCGCTGTCTATTGAGGGCCGTCC
CGACCGCGAGACCGCGATCAACATCCTCCATGACGTCCTCGACGCGGGATGCACCCACATTGACACCGCTTGGGCCTATT
ACGAGTCAGGAGGCGTGGAGCAGTACGGCGAAAGGCTCGTCACCGATGCCTTGGCGTCATGGGATGGTGACCATTCGACA
ATCTCGGTGGCCACTAAAGTCGGGCACTTTCGCTGTTTCAACGACGCCGGGCAACCCGTCTGGGATGTTGATGGGTCACC
GGAACGACTGCGTCGCGACGCGAAGCTCTCGGCTGAGGCATTGCGTACCGACCAGATCGATCTATTGTATTTGCATCGCC
CTGACCCCAAGGTCGAATACGAAGGCATGGTGCGGACTCTGGCCGGAATCCTCGACGACGGTTTGGCGCGTACCGCAGGC
ATCTCTAATGCCAATCCCGACCAGATTCGACTGGCCCACAGCATCCTCGGTGATCGTCTCGTGGCGGTGCAGAACCAGTT
CTCCCCAGGATTTCTATCCTCGCGTCCGGAACTGGAGCTATGCGGCGAACTCGGCCTAGCCTTCGTCGCGTGGAGCCCGC
TGGGCGGGTATCGTCGTCCCCTCGACGAGGACGCATTCGCGGCCTTCCAGCGCATCGCCGACGCCCGTGGCATCAGCCGG
GCACAGGTCATCCTTGCTTGGGAGCTGAGCAAGGGCCCGCACGTCATCCCGATTCCCGGGTCCCACCGTTCCCAGACGAT
TCTTGATTCCCTCAGGTCCGTCGACGTCACGCTGAACGACGAGGAGCTTGCCCAGCTTCCGTGA

Upstream 100 bases:

>100_bases
CCCACGTCCTACGATCAATGCACTTGGTCGCGACTCAGGGCACGATGTAGTTGCCACACCACCGGAGCATCATGGATACG
ACCACTACTAAAGGAGATGT

Downstream 100 bases:

>100_bases
TAGCTCCTCGAGGTGGCCGAGTGCACTCGGTGATCGCTCCTCTCACGCTTCGACGCGCTCTTTCGCCTGGCGCTTGGTCC
ACCGGTACAGGAACGCGATT

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKYRQIGPFRTSAIAYGSMPLSIEGRPDRETAINILHDVLDAGCTHIDTAWAYYESGGVEQYGERLVTDALASWDGDHST
ISVATKVGHFRCFNDAGQPVWDVDGSPERLRRDAKLSAEALRTDQIDLLYLHRPDPKVEYEGMVRTLAGILDDGLARTAG
ISNANPDQIRLAHSILGDRLVAVQNQFSPGFLSSRPELELCGELGLAFVAWSPLGGYRRPLDEDAFAAFQRIADARGISR
AQVILAWELSKGPHVIPIPGSHRSQTILDSLRSVDVTLNDEELAQLP

Sequences:

>Translated_287_residues
MKYRQIGPFRTSAIAYGSMPLSIEGRPDRETAINILHDVLDAGCTHIDTAWAYYESGGVEQYGERLVTDALASWDGDHST
ISVATKVGHFRCFNDAGQPVWDVDGSPERLRRDAKLSAEALRTDQIDLLYLHRPDPKVEYEGMVRTLAGILDDGLARTAG
ISNANPDQIRLAHSILGDRLVAVQNQFSPGFLSSRPELELCGELGLAFVAWSPLGGYRRPLDEDAFAAFQRIADARGISR
AQVILAWELSKGPHVIPIPGSHRSQTILDSLRSVDVTLNDEELAQLP
>Mature_287_residues
MKYRQIGPFRTSAIAYGSMPLSIEGRPDRETAINILHDVLDAGCTHIDTAWAYYESGGVEQYGERLVTDALASWDGDHST
ISVATKVGHFRCFNDAGQPVWDVDGSPERLRRDAKLSAEALRTDQIDLLYLHRPDPKVEYEGMVRTLAGILDDGLARTAG
ISNANPDQIRLAHSILGDRLVAVQNQFSPGFLSSRPELELCGELGLAFVAWSPLGGYRRPLDEDAFAAFQRIADARGISR
AQVILAWELSKGPHVIPIPGSHRSQTILDSLRSVDVTLNDEELAQLP

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI24497577, Length=275, Percent_Identity=26.1818181818182, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI5174391, Length=275, Percent_Identity=26.1818181818182, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1787674, Length=292, Percent_Identity=26.3698630136986, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI87081735, Length=332, Percent_Identity=28.0120481927711, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786400, Length=186, Percent_Identity=29.5698924731183, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI48994888, Length=247, Percent_Identity=28.7449392712551, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31545; Mature: 31545

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRQIGPFRTSAIAYGSMPLSIEGRPDRETAINILHDVLDAGCTHIDTAWAYYESGGVE
CCCCCCCCCCHHEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
QYGERLVTDALASWDGDHSTISVATKVGHFRCFNDAGQPVWDVDGSPERLRRDAKLSAEA
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHH
LRTDQIDLLYLHRPDPKVEYEGMVRTLAGILDDGLARTAGISNANPDQIRLAHSILGDRL
HCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VAVQNQFSPGFLSSRPELELCGELGLAFVAWSPLGGYRRPLDEDAFAAFQRIADARGISR
EEHHCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCE
AQVILAWELSKGPHVIPIPGSHRSQTILDSLRSVDVTLNDEELAQLP
EEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCEEEECHHHHHCCC
>Mature Secondary Structure
MKYRQIGPFRTSAIAYGSMPLSIEGRPDRETAINILHDVLDAGCTHIDTAWAYYESGGVE
CCCCCCCCCCHHEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
QYGERLVTDALASWDGDHSTISVATKVGHFRCFNDAGQPVWDVDGSPERLRRDAKLSAEA
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHH
LRTDQIDLLYLHRPDPKVEYEGMVRTLAGILDDGLARTAGISNANPDQIRLAHSILGDRL
HCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VAVQNQFSPGFLSSRPELELCGELGLAFVAWSPLGGYRRPLDEDAFAAFQRIADARGISR
EEHHCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCE
AQVILAWELSKGPHVIPIPGSHRSQTILDSLRSVDVTLNDEELAQLP
EEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCEEEECHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]