| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is serC [H]
Identifier: 50841966
GI number: 50841966
Start: 533059
End: 534177
Strand: Reverse
Name: serC [H]
Synonym: PPA0483
Alternate gene names: 50841966
Gene position: 534177-533059 (Counterclockwise)
Preceding gene: 50841974
Following gene: 50841964
Centisome position: 20.86
GC content: 61.39
Gene sequence:
>1119_bases ATGGCTCAGCCAATGATTCCTCGTGACCTTTTGCCCTCCGACCCCCGATTCGGGTGTGGCCCATCTCGGATCCGACGGGA GGTGGTGGCCAGTCTGTCCGAACCGGGATCCGTGATGGGTACCTCCCATCGCCAGCCACCGGTCCGTCACGTAGTCGCGG CAATCCGTGAAGAGTTGACTGAACTGTATAACCTGCCGACCGATTATGAGGTGGCACTCGGCAACGGTGGAGCCACCCTT TTCTGGGATATGGCAACCGTCTCCCTCGTGGAAAAACGAGCCGCCACCGGCGTCTACGGGGAATTCACGCGAAAGTTCTC CTCAGCTCTGCAGCGTGCCCCCTTCCTTGCTGACCCCGCAGTATTTCAAGCCGAACCCGGCAAGCTCGCCCTCCCGAAGG CCGTCAGCGACGTTGACACCTACGCATGGGCCCATAACGAGACCTCCACCGGCGTCGTTGCCCCAGTCCGACGACCTAAC GACATTGACGACAACTCCCTCGTTCTCGTTGACGCCACCTCGGCCGCCGGCGGCGTCGCGGCGGATATGTCAACCATTGA CGCCTACTACTTTTCACCGCAGAAAAATCTGTCTTCAGATGGTGGATTGTGGCTTGCGATCCTGTCACCTGCAGCGATCG AACGCTCGAACAGAGTGACCTCCTCGGCCCGCTGGGTACCCCAGATGCTCGATCTGAGTCTCGCCGTGACGAACTCGCGA GCTGATCAGACCCTGAATACCCCGGCTCTGGCCACCCTCGTCATGCTCGAGGCGCAATGCCGTTGGCTACTCGATCAGGG CGGTATGGCGTGGGCTGCATCACGCACAGCGTCAACGTCAGGAATCCTCTACCGCTGGGCCGAGGACAACCCCCTAACGA CCCCGTTCGTCGCTGACCCGGCGCTGCGCAGCCCAGTTGTCGTGACGATCGACATCGACGAGTCCGTCGACGCCGCACGA CTGTGTGCCCGCGCCCGCGACAACGGCATCCTCGACATCGAGCCTTACCGCAAGCTAGGGCGCAATCAGATCCGAATCGC AACCTTCAGCTCAATTGAGCCGAGCGACGTCGAGGCTCTGACGGCATGCCTGGACTGGCTACTAGAGAACCGCGACTAA
Upstream 100 bases:
>100_bases GTGATCATCGATGCCTCCTAACCGGGTTTCCCTCATCTTGCCACACGATCACAGCATGAACTCCGCCGTTATAGACGACA TGATCTGCAAGGATCGGATT
Downstream 100 bases:
>100_bases CGATGCCGCCAGGTGGTGTCCCGGGAGCGGCCGTAGAAGAACGTAACGACGCCAGCGCACAGCGCCACTACGACCGCCCC CATCACCGCGATAAAAGTTC
Product: phosphoserine aminotransferase
Products: NA
Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MAQPMIPRDLLPSDPRFGCGPSRIRREVVASLSEPGSVMGTSHRQPPVRHVVAAIREELTELYNLPTDYEVALGNGGATL FWDMATVSLVEKRAATGVYGEFTRKFSSALQRAPFLADPAVFQAEPGKLALPKAVSDVDTYAWAHNETSTGVVAPVRRPN DIDDNSLVLVDATSAAGGVAADMSTIDAYYFSPQKNLSSDGGLWLAILSPAAIERSNRVTSSARWVPQMLDLSLAVTNSR ADQTLNTPALATLVMLEAQCRWLLDQGGMAWAASRTASTSGILYRWAEDNPLTTPFVADPALRSPVVVTIDIDESVDAAR LCARARDNGILDIEPYRKLGRNQIRIATFSSIEPSDVEALTACLDWLLENRD
Sequences:
>Translated_372_residues MAQPMIPRDLLPSDPRFGCGPSRIRREVVASLSEPGSVMGTSHRQPPVRHVVAAIREELTELYNLPTDYEVALGNGGATL FWDMATVSLVEKRAATGVYGEFTRKFSSALQRAPFLADPAVFQAEPGKLALPKAVSDVDTYAWAHNETSTGVVAPVRRPN DIDDNSLVLVDATSAAGGVAADMSTIDAYYFSPQKNLSSDGGLWLAILSPAAIERSNRVTSSARWVPQMLDLSLAVTNSR ADQTLNTPALATLVMLEAQCRWLLDQGGMAWAASRTASTSGILYRWAEDNPLTTPFVADPALRSPVVVTIDIDESVDAAR LCARARDNGILDIEPYRKLGRNQIRIATFSSIEPSDVEALTACLDWLLENRD >Mature_371_residues AQPMIPRDLLPSDPRFGCGPSRIRREVVASLSEPGSVMGTSHRQPPVRHVVAAIREELTELYNLPTDYEVALGNGGATLF WDMATVSLVEKRAATGVYGEFTRKFSSALQRAPFLADPAVFQAEPGKLALPKAVSDVDTYAWAHNETSTGVVAPVRRPND IDDNSLVLVDATSAAGGVAADMSTIDAYYFSPQKNLSSDGGLWLAILSPAAIERSNRVTSSARWVPQMLDLSLAVTNSRA DQTLNTPALATLVMLEAQCRWLLDQGGMAWAASRTASTSGILYRWAEDNPLTTPFVADPALRSPVVVTIDIDESVDAARL CARARDNGILDIEPYRKLGRNQIRIATFSSIEPSDVEALTACLDWLLENRD
Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]
COG id: COG1932
COG function: function code HE; Phosphoserine aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 2500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR022278 - InterPro: IPR006272 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.52 [H]
Molecular weight: Translated: 40329; Mature: 40198
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPMIPRDLLPSDPRFGCGPSRIRREVVASLSEPGSVMGTSHRQPPVRHVVAAIREELT CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH ELYNLPTDYEVALGNGGATLFWDMATVSLVEKRAATGVYGEFTRKFSSALQRAPFLADPA HHHCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC VFQAEPGKLALPKAVSDVDTYAWAHNETSTGVVAPVRRPNDIDDNSLVLVDATSAAGGVA EEECCCCCEECCHHHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCH ADMSTIDAYYFSPQKNLSSDGGLWLAILSPAAIERSNRVTSSARWVPQMLDLSLAVTNSR HHHHHHHEEEECCCCCCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHCEEEEEECCC ADQTLNTPALATLVMLEAQCRWLLDQGGMAWAASRTASTSGILYRWAEDNPLTTPFVADP CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCC ALRSPVVVTIDIDESVDAARLCARARDNGILDIEPYRKLGRNQIRIATFSSIEPSDVEAL CCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEHHHHHCCCCEEEEEEECCCCCHHHHHH TACLDWLLENRD HHHHHHHHCCCC >Mature Secondary Structure AQPMIPRDLLPSDPRFGCGPSRIRREVVASLSEPGSVMGTSHRQPPVRHVVAAIREELT CCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH ELYNLPTDYEVALGNGGATLFWDMATVSLVEKRAATGVYGEFTRKFSSALQRAPFLADPA HHHCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC VFQAEPGKLALPKAVSDVDTYAWAHNETSTGVVAPVRRPNDIDDNSLVLVDATSAAGGVA EEECCCCCEECCHHHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCH ADMSTIDAYYFSPQKNLSSDGGLWLAILSPAAIERSNRVTSSARWVPQMLDLSLAVTNSR HHHHHHHEEEECCCCCCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHCEEEEEECCC ADQTLNTPALATLVMLEAQCRWLLDQGGMAWAASRTASTSGILYRWAEDNPLTTPFVADP CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCC ALRSPVVVTIDIDESVDAARLCARARDNGILDIEPYRKLGRNQIRIATFSSIEPSDVEAL CCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEHHHHHCCCCEEEEEEECCCCCHHHHHH TACLDWLLENRD HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA