| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841965
Identifier: 50841965
GI number: 50841965
Start: 532040
End: 533062
Strand: Direct
Name: 50841965
Synonym: PPA0482
Alternate gene names: NA
Gene position: 532040-533062 (Clockwise)
Preceding gene: 50841963
Following gene: 50841967
Centisome position: 20.78
GC content: 59.24
Gene sequence:
>1023_bases GTGATAGGTCGGTCCGGCATGGCAGGATGTAACATTGTGACCCAACGATCCCGCACCCGACGTCGCGCCTCCCGAGCCGC AAGCGCGTTGCTGGCGCTCGGATGCGCTTGGGGGTTGTCGGTTAGTCCTGCCGCAGCTGCCGACTTCACCGTCAGAACGG ATAAAAAGCTCGGCAAACCTGTCGGTATGGCTGCTGACCTTCATCATGACTGGTACTGGATCACCGACGGTTCTTCGTCG ACAGTCCACTCTCTGCTTGCTGTCGACAAGACGGGCAAAGAGGTTCACCGGGTGGTATGGGAGCCAGCCTTCCATGATGT CGAGGCGATGTCGTGGGCTCGTGGGGTACTGTACGTCGCTGACATCGGTGACAAGAAAGCTCAGCGTCGTGGGATTCGGG TGATGTCTCCCACCTCAACGGCAGCCAAGCAGTCCACCTATTACGAGTGGATGTTCACTTATCCGGACGGCGCTCACGAC GCCAAAGCCTTGACCGTCAGCCCCAAGGGGAGTTTTTACATCATCACCGACGGTCCACATCCTGCGATTTATCGGGGCGG CCCCCAGGTGAGCCGCACCGAATCGAACCCACTAGAAAAGGTGGCAGATGCCCCTGCTGGGGTCAAAGACGCCACATTCC TGCCAGATGGGTCACGAATGGCCCTCCTCACTGATCATGAGGTGCGCATCGTTGACGCCTACTCCTGGAAGACAGTCGCC AATGCGGCCTTCTCCGGCGGTCAGGCCATCACGACCGACACCACTCAAAAAACTCTGGAGATTGCGACCTCAGGTAACAA AGTGAGGGGGATCAAATTCCCGACAACCTTGACCTCGATTACGCCGACCCCGTCACACTCTCCGAAAGCCAAGGTGGTTA CCCCGGCCAATGGCAAACCGACGTCCAAGGCGCGATCAGGAACTTTTATCGCGGTGATGGGGGCGGTCGTAGTGGCGCTG TGCGCTGGCGTCGTTACGTTCTTCTACGGCCGCTCCCGGGACACCACCTGGCGGCATCGTTAG
Upstream 100 bases:
>100_bases GTTGACATAAGGTGTCGTCCATGAATCCACGCTCCAGGCAGCACATCATCAGCGGGGTTCTCATCGTCCTCTTACTCCTC GTCGTGCTGGGATCCCTGCT
Downstream 100 bases:
>100_bases TCGCGGTTCTCTAGTAGCCAGTCCAGGCATGCCGTCAGAGCCTCGACGTCGCTCGGCTCAATTGAGCTGAAGGTTGCGAT TCGGATCTGATTGCGCCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MIGRSGMAGCNIVTQRSRTRRRASRAASALLALGCAWGLSVSPAAAADFTVRTDKKLGKPVGMAADLHHDWYWITDGSSS TVHSLLAVDKTGKEVHRVVWEPAFHDVEAMSWARGVLYVADIGDKKAQRRGIRVMSPTSTAAKQSTYYEWMFTYPDGAHD AKALTVSPKGSFYIITDGPHPAIYRGGPQVSRTESNPLEKVADAPAGVKDATFLPDGSRMALLTDHEVRIVDAYSWKTVA NAAFSGGQAITTDTTQKTLEIATSGNKVRGIKFPTTLTSITPTPSHSPKAKVVTPANGKPTSKARSGTFIAVMGAVVVAL CAGVVTFFYGRSRDTTWRHR
Sequences:
>Translated_340_residues MIGRSGMAGCNIVTQRSRTRRRASRAASALLALGCAWGLSVSPAAAADFTVRTDKKLGKPVGMAADLHHDWYWITDGSSS TVHSLLAVDKTGKEVHRVVWEPAFHDVEAMSWARGVLYVADIGDKKAQRRGIRVMSPTSTAAKQSTYYEWMFTYPDGAHD AKALTVSPKGSFYIITDGPHPAIYRGGPQVSRTESNPLEKVADAPAGVKDATFLPDGSRMALLTDHEVRIVDAYSWKTVA NAAFSGGQAITTDTTQKTLEIATSGNKVRGIKFPTTLTSITPTPSHSPKAKVVTPANGKPTSKARSGTFIAVMGAVVVAL CAGVVTFFYGRSRDTTWRHR >Mature_340_residues MIGRSGMAGCNIVTQRSRTRRRASRAASALLALGCAWGLSVSPAAAADFTVRTDKKLGKPVGMAADLHHDWYWITDGSSS TVHSLLAVDKTGKEVHRVVWEPAFHDVEAMSWARGVLYVADIGDKKAQRRGIRVMSPTSTAAKQSTYYEWMFTYPDGAHD AKALTVSPKGSFYIITDGPHPAIYRGGPQVSRTESNPLEKVADAPAGVKDATFLPDGSRMALLTDHEVRIVDAYSWKTVA NAAFSGGQAITTDTTQKTLEIATSGNKVRGIKFPTTLTSITPTPSHSPKAKVVTPANGKPTSKARSGTFIAVMGAVVVAL CAGVVTFFYGRSRDTTWRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36554; Mature: 36554
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRSGMAGCNIVTQRSRTRRRASRAASALLALGCAWGLSVSPAAAADFTVRTDKKLGKP CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCC VGMAADLHHDWYWITDGSSSTVHSLLAVDKTGKEVHRVVWEPAFHDVEAMSWARGVLYVA CCCEEECCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCEEEEE DIGDKKAQRRGIRVMSPTSTAAKQSTYYEWMFTYPDGAHDAKALTVSPKGSFYIITDGPH ECCCHHHHHCCCEEECCCCHHHHCCEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCC PAIYRGGPQVSRTESNPLEKVADAPAGVKDATFLPDGSRMALLTDHEVRIVDAYSWKTVA CCEECCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCCEEEEEECCCEEEEEECCCHHHH NAAFSGGQAITTDTTQKTLEIATSGNKVRGIKFPTTLTSITPTPSHSPKAKVVTPANGKP HHHCCCCCEEEECCCCEEEEEEECCCEEEEEECCCEEEECCCCCCCCCCEEEEECCCCCC TSKARSGTFIAVMGAVVVALCAGVVTFFYGRSRDTTWRHR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIGRSGMAGCNIVTQRSRTRRRASRAASALLALGCAWGLSVSPAAAADFTVRTDKKLGKP CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCC VGMAADLHHDWYWITDGSSSTVHSLLAVDKTGKEVHRVVWEPAFHDVEAMSWARGVLYVA CCCEEECCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCEEEEE DIGDKKAQRRGIRVMSPTSTAAKQSTYYEWMFTYPDGAHDAKALTVSPKGSFYIITDGPH ECCCHHHHHCCCEEECCCCHHHHCCEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCC PAIYRGGPQVSRTESNPLEKVADAPAGVKDATFLPDGSRMALLTDHEVRIVDAYSWKTVA CCEECCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCCEEEEEECCCEEEEEECCCHHHH NAAFSGGQAITTDTTQKTLEIATSGNKVRGIKFPTTLTSITPTPSHSPKAKVVTPANGKP HHHCCCCCEEEECCCCEEEEEEECCCEEEEEECCCEEEECCCCCCCCCCEEEEECCCCCC TSKARSGTFIAVMGAVVVALCAGVVTFFYGRSRDTTWRHR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA