Click here to switch to the map view.

The map label for this gene is 50841961

Identifier: 50841961

GI number: 50841961

Start: 528593

End: 529393

Strand: Direct

Name: 50841961

Synonym: PPA0478

Alternate gene names: NA

Gene position: 528593-529393 (Clockwise)

Preceding gene: 50841960

Following gene: 50841963

Centisome position: 20.65

GC content: 62.67

Gene sequence:

>801_bases
ATGACACAGGTGACGTCGAAGCCGCGCACTGCGACCCGAACTATCAAAGCCGATGCGACCATTGCGAAGGCTGTTGATCA
GGCCCGGGAAGCTGCCGAGTACCGAGCTGGTGATTTCGGTGTGGGCGAGCACGTCGGGACTATCGCTGAAGGTGAGCGAG
TCCTGACCCATCTCTTCGAGTGCCCGCATCCCGGTTACCGAGGATGGCGTTGGGCCGTGACAATGTCGCGTGCTCTACGT
GGCCGTAACGTCACTGTCAATGAGGTTGTCCTCGTCCCTGGCGAGGATTCCTTACTCGCCCCCCCATGGGTGCCGTGGCG
TGATCGGGTGCGTGCTGGTGACATCGCCGCAGGCACTCTCATGCCGACTGCTGACAACGACCCGCGTTTGGAACCTGGTT
ACACCGGCGGTGAACTGGCCGCAGATGAGGACCCGGCTGAATGGGCTGCTACTCGCGCTGTTGCTTCTGAGTTGGGTTTG
GGACGGGAGCGACTGCTGTCGCGGGAGGGCCGTGACTCCACCGCCGAGCGCTGGCTCGCTGGTGAGGGCGGCCCGGACAA
CGCGACGAGCCATCATGCGCCAGCCAGCTGCGTGACCTGCGGGTATTTCGTGCGCCTACAGCATTCTCTGGGACGGGTTT
TTGGGGTGTGCTCGAACGAGTACTCTCCCTCCGACGGTTCGGTGGTCCACGTCGACCATGGTTGCGGAGGCCACTCCGAC
GTCGTTGAGAAGCGTCGGGGGATTGAGCTCCCAGAGCCCGTTTTCGACACCATCTCGGTTGACGAGTCGTTGTTCGACTG
A

Upstream 100 bases:

>100_bases
AGATGGGCAATGGTTACCGGCACGGGCGTCACTCTGATTCGCGCACTGCCGGCGCCGTGGCCAAGATGCTTCGTGCAGTC
GCTGACGAGTTGGAGCTGTG

Downstream 100 bases:

>100_bases
GTCGTCTTCTTCGCAGAAGCCCCGGTCTGCGATGAACTCAATGACGGGAACGCTGCCAGCAATATGCGGTGCCGACAACA
CCTAGGCCGGTACCCGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTQVTSKPRTATRTIKADATIAKAVDQAREAAEYRAGDFGVGEHVGTIAEGERVLTHLFECPHPGYRGWRWAVTMSRALR
GRNVTVNEVVLVPGEDSLLAPPWVPWRDRVRAGDIAAGTLMPTADNDPRLEPGYTGGELAADEDPAEWAATRAVASELGL
GRERLLSREGRDSTAERWLAGEGGPDNATSHHAPASCVTCGYFVRLQHSLGRVFGVCSNEYSPSDGSVVHVDHGCGGHSD
VVEKRRGIELPEPVFDTISVDESLFD

Sequences:

>Translated_266_residues
MTQVTSKPRTATRTIKADATIAKAVDQAREAAEYRAGDFGVGEHVGTIAEGERVLTHLFECPHPGYRGWRWAVTMSRALR
GRNVTVNEVVLVPGEDSLLAPPWVPWRDRVRAGDIAAGTLMPTADNDPRLEPGYTGGELAADEDPAEWAATRAVASELGL
GRERLLSREGRDSTAERWLAGEGGPDNATSHHAPASCVTCGYFVRLQHSLGRVFGVCSNEYSPSDGSVVHVDHGCGGHSD
VVEKRRGIELPEPVFDTISVDESLFD
>Mature_265_residues
TQVTSKPRTATRTIKADATIAKAVDQAREAAEYRAGDFGVGEHVGTIAEGERVLTHLFECPHPGYRGWRWAVTMSRALRG
RNVTVNEVVLVPGEDSLLAPPWVPWRDRVRAGDIAAGTLMPTADNDPRLEPGYTGGELAADEDPAEWAATRAVASELGLG
RERLLSREGRDSTAERWLAGEGGPDNATSHHAPASCVTCGYFVRLQHSLGRVFGVCSNEYSPSDGSVVHVDHGCGGHSDV
VEKRRGIELPEPVFDTISVDESLFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021391 [H]

Pfam domain/function: PF11228 DUF3027 [H]

EC number: NA

Molecular weight: Translated: 28726; Mature: 28595

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVTSKPRTATRTIKADATIAKAVDQAREAAEYRAGDFGVGEHVGTIAEGERVLTHLFE
CCCCCCCCCHHHEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHH
CPHPGYRGWRWAVTMSRALRGRNVTVNEVVLVPGEDSLLAPPWVPWRDRVRAGDIAAGTL
CCCCCCCCEEHEEEHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCEECCCC
MPTADNDPRLEPGYTGGELAADEDPAEWAATRAVASELGLGRERLLSREGRDSTAERWLA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHC
GEGGPDNATSHHAPASCVTCGYFVRLQHSLGRVFGVCSNEYSPSDGSVVHVDHGCGGHSD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHH
VVEKRRGIELPEPVFDTISVDESLFD
HHHHHHCCCCCCHHHHHHCCHHHHCC
>Mature Secondary Structure 
TQVTSKPRTATRTIKADATIAKAVDQAREAAEYRAGDFGVGEHVGTIAEGERVLTHLFE
CCCCCCCCHHHEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHH
CPHPGYRGWRWAVTMSRALRGRNVTVNEVVLVPGEDSLLAPPWVPWRDRVRAGDIAAGTL
CCCCCCCCEEHEEEHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCEECCCC
MPTADNDPRLEPGYTGGELAADEDPAEWAATRAVASELGLGRERLLSREGRDSTAERWLA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHC
GEGGPDNATSHHAPASCVTCGYFVRLQHSLGRVFGVCSNEYSPSDGSVVHVDHGCGGHSD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHH
VVEKRRGIELPEPVFDTISVDESLFD
HHHHHHCCCCCCHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]