Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50841907

Identifier: 50841907

GI number: 50841907

Start: 469443

End: 470309

Strand: Direct

Name: 50841907

Synonym: PPA0424

Alternate gene names: NA

Gene position: 469443-470309 (Clockwise)

Preceding gene: 50841906

Following gene: 50841909

Centisome position: 18.34

GC content: 60.67

Gene sequence:

>867_bases
ATGACGGGCGCGTCTGGTGGTGCATATCATCGTCGGGTGATTTCCCACGACCTGCATGCCCTGGGCTTCGATGCTCCCGA
TCTTGACGCTCTTGTCAACTCTGCGGCTGAGGCTGGTGCCGTCGGTGTGGAAGATGTCGGCGGATTTGACTTGCTGGCTG
CTTATACTGATCCGTCTGGAGCTCGGCTAGCTCTCATGAAGCAAAAGGGTCACGACGAGATGGAGACGATGGCCTCCCTT
GTCGCCCCGACGACGCATCCGGCGGATCTCGTGCGATTCAGCCCAGCGGTGGCGTTAGTCGACATCTATTCCCATGCGGG
TCTTGCCTCGATGCTCACCGGGGAGTCTGTCCTCACATTGCCGACAATGAATCGCAGGCACGTGGCGCGGTTCCTGGCCA
ACGTCGACGATCCGGTCGAGGTGCCGTTGTGTGCCGAGCCTGGCGACGACACCCCTCGTTTTGTTAAGCATCTTCGTGTG
GGCGCGGTCGCCAACCAGATGTTGCGGGTTTTTGAATCCGAGGAGGAGTACGGGCGTTCCCACGAGGGATCCTTGGGCGG
CGAGCTACAGTTCGCCGCCGGAACCCTGATCAGTCCTTGGCTCATGGAGATTAACGCCGGGCGAGCTACCCGTGGTGAGG
CCAGTGCTGTCGCTGAGATGACGATGGTGTGCAAGAAAGTTGAGAAACGCACGAACGTGCTAACTGGGGTGGACTGGTAC
CGGATCGTGGGTGACACTTCGATTCCCATGACTCTGGCCGTGTCTGCGAACCTTCCTCGTGTGCCGCATGTGGGGTCAGT
CGTCACTGGGCAGGTCGTCCCGGTGGTGTCGACGGGAACCTGGGAGGGTGACGTCCTCTGGGGGTGA

Upstream 100 bases:

>100_bases
GCACCCCACGTCGTTCTGCCAGGCTGCGGGATGAGGTGCTGCGAGCCTTGCAAGGCTGATCAATGGGGTCATTCATGACA
CGGCGTGGGATCGCTCGACC

Downstream 100 bases:

>100_bases
GCATGAGCGGTCCTTGTGTTGCGACGCCCCACACCTCATCGTCATGACGGGCTGGTCATGTTTGCAGTGTGGAAACGTCA
CACTACAACTCACACTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSGARLALMKQKGHDEMETMASL
VAPTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTLPTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRV
GAVANQMLRVFESEEEYGRSHEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY
RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG

Sequences:

>Translated_288_residues
MTGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSGARLALMKQKGHDEMETMASL
VAPTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTLPTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRV
GAVANQMLRVFESEEEYGRSHEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY
RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG
>Mature_287_residues
TGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSGARLALMKQKGHDEMETMASLV
APTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTLPTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRVG
AVANQMLRVFESEEEYGRSHEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWYR
IVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30554; Mature: 30423

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSG
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC
ARLALMKQKGHDEMETMASLVAPTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTL
CEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCEEEE
PTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRVGAVANQMLRVFESEEEYGRS
CCCCHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
HEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY
CCCCCCCEEEECCCCHHCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG
EEECCCCCCEEEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCEECC
>Mature Secondary Structure 
TGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSG
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC
ARLALMKQKGHDEMETMASLVAPTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTL
CEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCEEEE
PTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRVGAVANQMLRVFESEEEYGRS
CCCCHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
HEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY
CCCCCCCEEEECCCCHHCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG
EEECCCCCCEEEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA