| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841907
Identifier: 50841907
GI number: 50841907
Start: 469443
End: 470309
Strand: Direct
Name: 50841907
Synonym: PPA0424
Alternate gene names: NA
Gene position: 469443-470309 (Clockwise)
Preceding gene: 50841906
Following gene: 50841909
Centisome position: 18.34
GC content: 60.67
Gene sequence:
>867_bases ATGACGGGCGCGTCTGGTGGTGCATATCATCGTCGGGTGATTTCCCACGACCTGCATGCCCTGGGCTTCGATGCTCCCGA TCTTGACGCTCTTGTCAACTCTGCGGCTGAGGCTGGTGCCGTCGGTGTGGAAGATGTCGGCGGATTTGACTTGCTGGCTG CTTATACTGATCCGTCTGGAGCTCGGCTAGCTCTCATGAAGCAAAAGGGTCACGACGAGATGGAGACGATGGCCTCCCTT GTCGCCCCGACGACGCATCCGGCGGATCTCGTGCGATTCAGCCCAGCGGTGGCGTTAGTCGACATCTATTCCCATGCGGG TCTTGCCTCGATGCTCACCGGGGAGTCTGTCCTCACATTGCCGACAATGAATCGCAGGCACGTGGCGCGGTTCCTGGCCA ACGTCGACGATCCGGTCGAGGTGCCGTTGTGTGCCGAGCCTGGCGACGACACCCCTCGTTTTGTTAAGCATCTTCGTGTG GGCGCGGTCGCCAACCAGATGTTGCGGGTTTTTGAATCCGAGGAGGAGTACGGGCGTTCCCACGAGGGATCCTTGGGCGG CGAGCTACAGTTCGCCGCCGGAACCCTGATCAGTCCTTGGCTCATGGAGATTAACGCCGGGCGAGCTACCCGTGGTGAGG CCAGTGCTGTCGCTGAGATGACGATGGTGTGCAAGAAAGTTGAGAAACGCACGAACGTGCTAACTGGGGTGGACTGGTAC CGGATCGTGGGTGACACTTCGATTCCCATGACTCTGGCCGTGTCTGCGAACCTTCCTCGTGTGCCGCATGTGGGGTCAGT CGTCACTGGGCAGGTCGTCCCGGTGGTGTCGACGGGAACCTGGGAGGGTGACGTCCTCTGGGGGTGA
Upstream 100 bases:
>100_bases GCACCCCACGTCGTTCTGCCAGGCTGCGGGATGAGGTGCTGCGAGCCTTGCAAGGCTGATCAATGGGGTCATTCATGACA CGGCGTGGGATCGCTCGACC
Downstream 100 bases:
>100_bases GCATGAGCGGTCCTTGTGTTGCGACGCCCCACACCTCATCGTCATGACGGGCTGGTCATGTTTGCAGTGTGGAAACGTCA CACTACAACTCACACTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSGARLALMKQKGHDEMETMASL VAPTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTLPTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRV GAVANQMLRVFESEEEYGRSHEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG
Sequences:
>Translated_288_residues MTGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSGARLALMKQKGHDEMETMASL VAPTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTLPTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRV GAVANQMLRVFESEEEYGRSHEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG >Mature_287_residues TGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSGARLALMKQKGHDEMETMASLV APTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTLPTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRVG AVANQMLRVFESEEEYGRSHEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWYR IVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30554; Mature: 30423
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSG CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC ARLALMKQKGHDEMETMASLVAPTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTL CEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCEEEE PTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRVGAVANQMLRVFESEEEYGRS CCCCHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCC HEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY CCCCCCCEEEECCCCHHCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG EEECCCCCCEEEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCEECC >Mature Secondary Structure TGASGGAYHRRVISHDLHALGFDAPDLDALVNSAAEAGAVGVEDVGGFDLLAAYTDPSG CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC ARLALMKQKGHDEMETMASLVAPTTHPADLVRFSPAVALVDIYSHAGLASMLTGESVLTL CEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCEEEE PTMNRRHVARFLANVDDPVEVPLCAEPGDDTPRFVKHLRVGAVANQMLRVFESEEEYGRS CCCCHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCC HEGSLGGELQFAAGTLISPWLMEINAGRATRGEASAVAEMTMVCKKVEKRTNVLTGVDWY CCCCCCCEEEECCCCHHCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE RIVGDTSIPMTLAVSANLPRVPHVGSVVTGQVVPVVSTGTWEGDVLWG EEECCCCCCEEEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA