Click here to switch to the map view.

The map label for this gene is 50841895

Identifier: 50841895

GI number: 50841895

Start: 457517

End: 458101

Strand: Direct

Name: 50841895

Synonym: PPA0413

Alternate gene names: NA

Gene position: 457517-458101 (Clockwise)

Preceding gene: 50841894

Following gene: 50841897

Centisome position: 17.87

GC content: 59.83

Gene sequence:

>585_bases
ATGATCACCTACGCGCTTCTCGACATCCGCAGGTTGCTTCGCAACACCGGCGGCACCATCTTCACCGTACTCATGCCTGC
CGGTTTCTACCTCATCTTCGGAGCCACCCAGTCGTACACCGACGCCGCCGTTGCCCACGGAAACGTCAAGGCAACGATCA
TGGTCTCCATGGCCGTTTACGGGGCCGTCCTGGCCGTCACCACATGGGGATCCCACGCCGCTCTCGAACAGCAGCGCGGA
TGGGGTCGTCAGCTGGCGCTCACCCCGATGACACCGTTGAAATACGTCTTTTCAAAGGTGCTGGCGATCGAAACTGTGGC
TTTGGTTCCGCTGGCGGTCGTGTTCGCCACGGGTGCCATCACCAATGCCCGCGTCGATGGGTTGCGCTGGTTGTGGTCCT
TCCTGCTGTGCTGGGTGTGCTCGATGCCCTTCACTTTGTTCGGTCTGGCCGTCGCCTTGCTGGTGCGTGGCGAGGCTGCG
ACTGGGATCACCTCCTTCTGTACCGTTGCCGTGGCCTTTCTAGGCAATATGTTCATCCCGCTGAATGGATTCATGCTCAA
GCTGTCACGATTCACCCCAATGTAG

Upstream 100 bases:

>100_bases
ACGGACTGCTCATCTCGACGACGACCCTTGAGGACGCCTTCGTCCGGCTCACAGGCTCCAATGATTCCCGTGACGATGCT
GACGACTGGGAGGCAGCAGC

Downstream 100 bases:

>100_bases
TGGGCCCGGCCAGCTGACGCGGATGCCGCTCATCGGGCAGCAGATGGTGACGATGCGTGGCGTGATCGACGAGCCGGTGT
GGCGTCCTGTCGTCAGTATC

Product: putative permease

Products: NA

Alternate protein names: ABC Transporter Integral Membrane Protein; ABC Transporter Permease Protein; ABC Transport System Permease Protein; ABC Transporter; ABC-Type Multidrug Transport System Permease Component; ABC Transporter Permease; ABC Drug Resistance Transporter Inner Membrane Subunit; Multidrug ABC Transporter Permease; ABC Transporter Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MITYALLDIRRLLRNTGGTIFTVLMPAGFYLIFGATQSYTDAAVAHGNVKATIMVSMAVYGAVLAVTTWGSHAALEQQRG
WGRQLALTPMTPLKYVFSKVLAIETVALVPLAVVFATGAITNARVDGLRWLWSFLLCWVCSMPFTLFGLAVALLVRGEAA
TGITSFCTVAVAFLGNMFIPLNGFMLKLSRFTPM

Sequences:

>Translated_194_residues
MITYALLDIRRLLRNTGGTIFTVLMPAGFYLIFGATQSYTDAAVAHGNVKATIMVSMAVYGAVLAVTTWGSHAALEQQRG
WGRQLALTPMTPLKYVFSKVLAIETVALVPLAVVFATGAITNARVDGLRWLWSFLLCWVCSMPFTLFGLAVALLVRGEAA
TGITSFCTVAVAFLGNMFIPLNGFMLKLSRFTPM
>Mature_194_residues
MITYALLDIRRLLRNTGGTIFTVLMPAGFYLIFGATQSYTDAAVAHGNVKATIMVSMAVYGAVLAVTTWGSHAALEQQRG
WGRQLALTPMTPLKYVFSKVLAIETVALVPLAVVFATGAITNARVDGLRWLWSFLLCWVCSMPFTLFGLAVALLVRGEAA
TGITSFCTVAVAFLGNMFIPLNGFMLKLSRFTPM

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21008; Mature: 21008

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYALLDIRRLLRNTGGTIFTVLMPAGFYLIFGATQSYTDAAVAHGNVKATIMVSMAVY
CHHHHHHHHHHHHHHCCCCEEEHHHHCCEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHH
GAVLAVTTWGSHAALEQQRGWGRQLALTPMTPLKYVFSKVLAIETVALVPLAVVFATGAI
HHHHHHCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNARVDGLRWLWSFLLCWVCSMPFTLFGLAVALLVRGEAATGITSFCTVAVAFLGNMFIP
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
LNGFMLKLSRFTPM
CCHHHHHHHHCCCC
>Mature Secondary Structure
MITYALLDIRRLLRNTGGTIFTVLMPAGFYLIFGATQSYTDAAVAHGNVKATIMVSMAVY
CHHHHHHHHHHHHHHCCCCEEEHHHHCCEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHH
GAVLAVTTWGSHAALEQQRGWGRQLALTPMTPLKYVFSKVLAIETVALVPLAVVFATGAI
HHHHHHCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNARVDGLRWLWSFLLCWVCSMPFTLFGLAVALLVRGEAATGITSFCTVAVAFLGNMFIP
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
LNGFMLKLSRFTPM
CCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA