Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50841890

Identifier: 50841890

GI number: 50841890

Start: 453574

End: 454374

Strand: Direct

Name: 50841890

Synonym: PPA0408

Alternate gene names: NA

Gene position: 453574-454374 (Clockwise)

Preceding gene: 50841885

Following gene: 50841891

Centisome position: 17.72

GC content: 60.3

Gene sequence:

>801_bases
GTGCAGAATGAGATGAGCACTGCGGCGGCAGGTGAGAAGGATTCCTTTGCCGTTGCCGCCACCTCCCTGGCTGTGGCTGA
AGACGAACTGGCGCGATCCTCCACCGGAACCGAGTCCTCAGCAGAGGAGGAGTGGTGGAAGGCCGAGGGCATGCCGTGGA
ACCACAAGCCGGGTCGCTCCGACTACTGGTGCATGGGGTGGATCGGTTTCCTTGGCATCTTCTCCTTGGCGATGCTCCCA
TTGCGCGGTTGGCTGCTCGGTCTTGATCCGCCCATCCTCATGGGGTTGACCGGGTCTCGTACCGGTGCGGCTGCGACCGG
GGCGCTGGCATCAGTGGGGCAGGCTCCGTACTGGCTTTGGTGGCTGTTGTTGGGCTCGATTATGTCGATCAAACTCGACT
GGGTCTACTGGTGGGCCGGCAAGCTGTGGGGCCGGGGCATGATCGAGGTCTGGGCTGGACGATCCGAGCGGGCGCATCGC
AGGTATGACCAGGCGGAGAAATGGGCTCGCAAGCTTGGCTGGCTGGGAGTGCTCGTCGCCTATGTGCCGATCCCGCTTCC
GATCATGCCGGTTGTGTTCGTCTTAACGGGGGCATCTGGGATGAAGGTGAGGTGGTTTATTGCTCTGGACTTCGTCGCCG
CGACCATCTGGAATCTAGGATATCTGGGACTGGGCTGGGGAGTGGGCGATCCCATCGTTGACGCCCTCAAGTACTACGCC
AAGATTGCTAATTGGGTGGCTATCGCTCTCATCATCGTCATCTTGGCACCCATCTTCGTCAAAAAGAAGCAGAAGGCTTA
A

Upstream 100 bases:

>100_bases
TACCACGCTACCGCTGAGATAGGGCTGTGAGTAGGGCGTTCCCCTCTCGGCAGATATTGCCGATGCAGGGTTGTCACCGG
TTCTGGGTATCCTCAACGGC

Downstream 100 bases:

>100_bases
CCCTCGCGTGACACAGTGGAAGACATGACGATTTTCCGCGCAGTGAACATTCGTGATGACCTCAAGAAGGGCCCTGCCGA
GGGGTACCGGGTATTGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRSDYWCMGWIGFLGIFSLAMLP
LRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLWWLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHR
RYDQAEKWARKLGWLGVLVAYVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA
KIANWVAIALIIVILAPIFVKKKQKA

Sequences:

>Translated_266_residues
MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRSDYWCMGWIGFLGIFSLAMLP
LRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLWWLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHR
RYDQAEKWARKLGWLGVLVAYVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA
KIANWVAIALIIVILAPIFVKKKQKA
>Mature_266_residues
MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRSDYWCMGWIGFLGIFSLAMLP
LRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLWWLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHR
RYDQAEKWARKLGWLGVLVAYVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA
KIANWVAIALIIVILAPIFVKKKQKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29404; Mature: 29404

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRS
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCC
DYWCMGWIGFLGIFSLAMLPLRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLW
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHHCCCHHHHH
WLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHRRYDQAEKWARKLGWLGVLVA
HHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA
HHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHH
KIANWVAIALIIVILAPIFVKKKQKA
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRS
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCC
DYWCMGWIGFLGIFSLAMLPLRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLW
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHHCCCHHHHH
WLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHRRYDQAEKWARKLGWLGVLVA
HHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA
HHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHH
KIANWVAIALIIVILAPIFVKKKQKA
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA