Definition | Propionibacterium acnes KPA171202, complete genome. |
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Accession | NC_006085 |
Length | 2,560,265 |
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The map label for this gene is 50841890
Identifier: 50841890
GI number: 50841890
Start: 453574
End: 454374
Strand: Direct
Name: 50841890
Synonym: PPA0408
Alternate gene names: NA
Gene position: 453574-454374 (Clockwise)
Preceding gene: 50841885
Following gene: 50841891
Centisome position: 17.72
GC content: 60.3
Gene sequence:
>801_bases GTGCAGAATGAGATGAGCACTGCGGCGGCAGGTGAGAAGGATTCCTTTGCCGTTGCCGCCACCTCCCTGGCTGTGGCTGA AGACGAACTGGCGCGATCCTCCACCGGAACCGAGTCCTCAGCAGAGGAGGAGTGGTGGAAGGCCGAGGGCATGCCGTGGA ACCACAAGCCGGGTCGCTCCGACTACTGGTGCATGGGGTGGATCGGTTTCCTTGGCATCTTCTCCTTGGCGATGCTCCCA TTGCGCGGTTGGCTGCTCGGTCTTGATCCGCCCATCCTCATGGGGTTGACCGGGTCTCGTACCGGTGCGGCTGCGACCGG GGCGCTGGCATCAGTGGGGCAGGCTCCGTACTGGCTTTGGTGGCTGTTGTTGGGCTCGATTATGTCGATCAAACTCGACT GGGTCTACTGGTGGGCCGGCAAGCTGTGGGGCCGGGGCATGATCGAGGTCTGGGCTGGACGATCCGAGCGGGCGCATCGC AGGTATGACCAGGCGGAGAAATGGGCTCGCAAGCTTGGCTGGCTGGGAGTGCTCGTCGCCTATGTGCCGATCCCGCTTCC GATCATGCCGGTTGTGTTCGTCTTAACGGGGGCATCTGGGATGAAGGTGAGGTGGTTTATTGCTCTGGACTTCGTCGCCG CGACCATCTGGAATCTAGGATATCTGGGACTGGGCTGGGGAGTGGGCGATCCCATCGTTGACGCCCTCAAGTACTACGCC AAGATTGCTAATTGGGTGGCTATCGCTCTCATCATCGTCATCTTGGCACCCATCTTCGTCAAAAAGAAGCAGAAGGCTTA A
Upstream 100 bases:
>100_bases TACCACGCTACCGCTGAGATAGGGCTGTGAGTAGGGCGTTCCCCTCTCGGCAGATATTGCCGATGCAGGGTTGTCACCGG TTCTGGGTATCCTCAACGGC
Downstream 100 bases:
>100_bases CCCTCGCGTGACACAGTGGAAGACATGACGATTTTCCGCGCAGTGAACATTCGTGATGACCTCAAGAAGGGCCCTGCCGA GGGGTACCGGGTATTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRSDYWCMGWIGFLGIFSLAMLP LRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLWWLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHR RYDQAEKWARKLGWLGVLVAYVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA KIANWVAIALIIVILAPIFVKKKQKA
Sequences:
>Translated_266_residues MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRSDYWCMGWIGFLGIFSLAMLP LRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLWWLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHR RYDQAEKWARKLGWLGVLVAYVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA KIANWVAIALIIVILAPIFVKKKQKA >Mature_266_residues MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRSDYWCMGWIGFLGIFSLAMLP LRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLWWLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHR RYDQAEKWARKLGWLGVLVAYVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA KIANWVAIALIIVILAPIFVKKKQKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29404; Mature: 29404
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRS CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCC DYWCMGWIGFLGIFSLAMLPLRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLW CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHHCCCHHHHH WLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHRRYDQAEKWARKLGWLGVLVA HHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA HHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHH KIANWVAIALIIVILAPIFVKKKQKA HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQNEMSTAAAGEKDSFAVAATSLAVAEDELARSSTGTESSAEEEWWKAEGMPWNHKPGRS CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCC DYWCMGWIGFLGIFSLAMLPLRGWLLGLDPPILMGLTGSRTGAAATGALASVGQAPYWLW CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHHCCCHHHHH WLLLGSIMSIKLDWVYWWAGKLWGRGMIEVWAGRSERAHRRYDQAEKWARKLGWLGVLVA HHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YVPIPLPIMPVVFVLTGASGMKVRWFIALDFVAATIWNLGYLGLGWGVGDPIVDALKYYA HHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHH KIANWVAIALIIVILAPIFVKKKQKA HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA