| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841869
Identifier: 50841869
GI number: 50841869
Start: 432990
End: 434408
Strand: Reverse
Name: 50841869
Synonym: PPA0386
Alternate gene names: NA
Gene position: 434408-432990 (Counterclockwise)
Preceding gene: 50841878
Following gene: 50841867
Centisome position: 16.97
GC content: 61.38
Gene sequence:
>1419_bases GTGGGTGGCAAACTGTTCCTCGTGACCCGATTCCTCAGCGCGAAGCCCGACTCCCGCCTGCTTCCGTTGCCGTGGAGCAC ACCGTTGGCACAGTGGCCGCAGGAGCGGCTCGTCGCGCTGCCTCGGGGCATCTCTCGTCACGTGGTGCGGTTCATCACTG TCGACGACGATGTCTACGCCGCCAAGGAGGTCGTCGAGCACCTCGCAATTCACGAATACCGCTTGCTGCACGACCTCATG AGGCTCGATACCCCGTCGGTCGAGCCCATCGGCGTCATTACTGACCGCGTTGCGTCCAACGGTGAACCGCTGGAGCCGAT CATCCTCACCCGCCACCTACGGTTCTCTTTGCCCTACAGGTCCCTTTTCCATTCTGGTGTGCGTCAAGGAACCGTCATGC GGCTCCTTGACGCCCTCGTCGTTCTTCTTGTGCGACTTCATCTGGTGGGCTTCTTATGGGGTGACATCTCGCTGTCGAAC GTACTGTTCCGACGAGATGCCGAGGCCTTCGCGGCCTATCTAGTCGATGCCGAGACCGGTGAGCTGCACGATCACCTGAC CACCGGCCAGCGGGAACACGACCTACAAATCGCCCGGACGAATCTCTATGGCGAGTTCCTCGACCTTGAAGAGGGCGACA TGCTCGACGATGCCCTGGACCCCCTGGGCTTGGTCACGACTATCGAGGACCGCTATCACGACCTGTGGAATGAACTCACT GCGGCCGAGGAATTCGACGGAGGCGATTACTCCCAGGTCGAGTCGCGGGTACGTCGCCTCAATGCTCTTGGCTTCGACGT CGCCGAATTGGACATCCAAACCTCGCCGGACGGCCAGCGACTACGCATCCAGCCCAAGGTCGTTGACGCCGGGCACCACC AGCGTCGCTTGCTGCGCCTAACTGGCTTAGACACCGAAGAATTCCAGGCACGGCGTCTGCTCAACGATCTCGACACCTTC CGGGCGCGCAATGGGCTTCAGGGGGTTGACGAGGCAGTCGCGGCTCACCGCTGGCTCACCGAGTGTTTCGAGCCAGTCGT CCAGCAAATTCCGCCGGAACTGTCCCGGAAACGCGAGCTCGCGCAGTTTTACCACGAGGTCCTCGACTATCGGTGGTACG AGTCTCAGCGTCAGCAACGGGAAGTCCCCCACGTTGAAGCAGCCCAGGGCTACGTCCGTGACATTCTCGCCAAGTTGCCC GACGAGGCCATAAGCACAGAATCCGTAGTACCGGTGGACGGTTCACCGGCGCACAGCGGACATGAACTGGTCAACGTCTA CGACCCGTCGCTCGGATACGTTGAGGACGAAGAAGAAAACGCCCCCTACGACCCGTGGGAGGCCCATGCCGAAGCTATCG ACGTGGAGTCCGCGTCGCGTCTCGACATCGACGCCTTGCGAGCCCGAATGAAACGCTAG
Upstream 100 bases:
>100_bases ACGATGTCCACCACCATGCAGGGACTGACGGTCCTCGAAGGTGGCGCCGCGACTGTCTGAATTCCCCCTCTGACTAGGTG GCACACCACCTAACCCGAGT
Downstream 100 bases:
>100_bases GACAGCCTGATCAATCTGAGGACTTCGGCAGCATCGCCACAGTGAAGGACCCCCACTGGGCGGAACCTGCGGCGACCGAT GGGGTGGACTCGAGCTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MGGKLFLVTRFLSAKPDSRLLPLPWSTPLAQWPQERLVALPRGISRHVVRFITVDDDVYAAKEVVEHLAIHEYRLLHDLM RLDTPSVEPIGVITDRVASNGEPLEPIILTRHLRFSLPYRSLFHSGVRQGTVMRLLDALVVLLVRLHLVGFLWGDISLSN VLFRRDAEAFAAYLVDAETGELHDHLTTGQREHDLQIARTNLYGEFLDLEEGDMLDDALDPLGLVTTIEDRYHDLWNELT AAEEFDGGDYSQVESRVRRLNALGFDVAELDIQTSPDGQRLRIQPKVVDAGHHQRRLLRLTGLDTEEFQARRLLNDLDTF RARNGLQGVDEAVAAHRWLTECFEPVVQQIPPELSRKRELAQFYHEVLDYRWYESQRQQREVPHVEAAQGYVRDILAKLP DEAISTESVVPVDGSPAHSGHELVNVYDPSLGYVEDEEENAPYDPWEAHAEAIDVESASRLDIDALRARMKR
Sequences:
>Translated_472_residues MGGKLFLVTRFLSAKPDSRLLPLPWSTPLAQWPQERLVALPRGISRHVVRFITVDDDVYAAKEVVEHLAIHEYRLLHDLM RLDTPSVEPIGVITDRVASNGEPLEPIILTRHLRFSLPYRSLFHSGVRQGTVMRLLDALVVLLVRLHLVGFLWGDISLSN VLFRRDAEAFAAYLVDAETGELHDHLTTGQREHDLQIARTNLYGEFLDLEEGDMLDDALDPLGLVTTIEDRYHDLWNELT AAEEFDGGDYSQVESRVRRLNALGFDVAELDIQTSPDGQRLRIQPKVVDAGHHQRRLLRLTGLDTEEFQARRLLNDLDTF RARNGLQGVDEAVAAHRWLTECFEPVVQQIPPELSRKRELAQFYHEVLDYRWYESQRQQREVPHVEAAQGYVRDILAKLP DEAISTESVVPVDGSPAHSGHELVNVYDPSLGYVEDEEENAPYDPWEAHAEAIDVESASRLDIDALRARMKR >Mature_471_residues GGKLFLVTRFLSAKPDSRLLPLPWSTPLAQWPQERLVALPRGISRHVVRFITVDDDVYAAKEVVEHLAIHEYRLLHDLMR LDTPSVEPIGVITDRVASNGEPLEPIILTRHLRFSLPYRSLFHSGVRQGTVMRLLDALVVLLVRLHLVGFLWGDISLSNV LFRRDAEAFAAYLVDAETGELHDHLTTGQREHDLQIARTNLYGEFLDLEEGDMLDDALDPLGLVTTIEDRYHDLWNELTA AEEFDGGDYSQVESRVRRLNALGFDVAELDIQTSPDGQRLRIQPKVVDAGHHQRRLLRLTGLDTEEFQARRLLNDLDTFR ARNGLQGVDEAVAAHRWLTECFEPVVQQIPPELSRKRELAQFYHEVLDYRWYESQRQQREVPHVEAAQGYVRDILAKLPD EAISTESVVPVDGSPAHSGHELVNVYDPSLGYVEDEEENAPYDPWEAHAEAIDVESASRLDIDALRARMKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53822; Mature: 53691
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGKLFLVTRFLSAKPDSRLLPLPWSTPLAQWPQERLVALPRGISRHVVRFITVDDDVYA CCCEEEEHHHHHCCCCCCCEECCCCCCCHHHCCHHHHHHHCCCHHHHEEEEEEECCHHHH AKEVVEHLAIHEYRLLHDLMRLDTPSVEPIGVITDRVASNGEPLEPIILTRHLRFSLPYR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH SLFHSGVRQGTVMRLLDALVVLLVRLHLVGFLWGDISLSNVLFRRDAEAFAAYLVDAETG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ELHDHLTTGQREHDLQIARTNLYGEFLDLEEGDMLDDALDPLGLVTTIEDRYHDLWNELT HHHHHHCCCCCHHCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH AAEEFDGGDYSQVESRVRRLNALGFDVAELDIQTSPDGQRLRIQPKVVDAGHHQRRLLRL HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECEEECCCCHHHHHHHH TGLDTEEFQARRLLNDLDTFRARNGLQGVDEAVAAHRWLTECFEPVVQQIPPELSRKREL HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AQFYHEVLDYRWYESQRQQREVPHVEAAQGYVRDILAKLPDEAISTESVVPVDGSPAHSG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCEECCCCCCCCCC HELVNVYDPSLGYVEDEEENAPYDPWEAHAEAIDVESASRLDIDALRARMKR CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure GGKLFLVTRFLSAKPDSRLLPLPWSTPLAQWPQERLVALPRGISRHVVRFITVDDDVYA CCEEEEHHHHHCCCCCCCEECCCCCCCHHHCCHHHHHHHCCCHHHHEEEEEEECCHHHH AKEVVEHLAIHEYRLLHDLMRLDTPSVEPIGVITDRVASNGEPLEPIILTRHLRFSLPYR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH SLFHSGVRQGTVMRLLDALVVLLVRLHLVGFLWGDISLSNVLFRRDAEAFAAYLVDAETG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ELHDHLTTGQREHDLQIARTNLYGEFLDLEEGDMLDDALDPLGLVTTIEDRYHDLWNELT HHHHHHCCCCCHHCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH AAEEFDGGDYSQVESRVRRLNALGFDVAELDIQTSPDGQRLRIQPKVVDAGHHQRRLLRL HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECEEECCCCHHHHHHHH TGLDTEEFQARRLLNDLDTFRARNGLQGVDEAVAAHRWLTECFEPVVQQIPPELSRKREL HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AQFYHEVLDYRWYESQRQQREVPHVEAAQGYVRDILAKLPDEAISTESVVPVDGSPAHSG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCEECCCCCCCCCC HELVNVYDPSLGYVEDEEENAPYDPWEAHAEAIDVESASRLDIDALRARMKR CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA